Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:0250:0251
Extra
PDB:
ATOM 1 O3' A A 249 94.856 122.721 3.325 1.00 52.77 O
ATOM 2 P A A 250 96.434 122.733 3.645 1.00 55.75 P
ATOM 3 OP1 A A 250 96.626 122.652 5.106 1.00 58.49 O
ATOM 4 OP2 A A 250 97.069 123.848 2.889 1.00 58.21 O
ATOM 5 O5' A A 250 96.968 121.369 3.028 1.00 54.95 O
ATOM 6 C5' A A 250 96.608 120.972 1.693 1.00 52.98 C
ATOM 7 C4' A A 250 97.354 119.715 1.308 1.00 52.52 C
ATOM 8 O4' A A 250 96.908 119.276 -0.004 1.00 54.49 O
ATOM 9 C3' A A 250 98.866 119.865 1.203 1.00 51.82 C
ATOM 10 O3' A A 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 11 C2' A A 250 99.047 120.219 -0.272 1.00 53.56 C
ATOM 12 O2' A A 250 100.333 119.908 -0.767 1.00 54.54 O
ATOM 13 C1' A A 250 97.993 119.317 -0.914 1.00 55.27 C
ATOM 14 N9 A A 250 97.485 119.759 -2.213 1.00 56.55 N
ATOM 15 C8 A A 250 97.600 119.098 -3.410 1.00 56.57 C
ATOM 16 N7 A A 250 97.015 119.710 -4.411 1.00 57.49 N
ATOM 17 C5 A A 250 96.483 120.856 -3.838 1.00 57.45 C
ATOM 18 C6 A A 250 95.734 121.922 -4.371 1.00 57.60 C
ATOM 19 N6 A A 250 95.369 122.008 -5.653 1.00 56.67 N
ATOM 20 N1 A A 250 95.363 122.909 -3.528 1.00 58.81 N
ATOM 21 C2 A A 250 95.720 122.821 -2.242 1.00 58.78 C
ATOM 22 N3 A A 250 96.419 121.870 -1.623 1.00 58.69 N
ATOM 23 C4 A A 250 96.774 120.905 -2.486 1.00 57.53 C
ATOM 24 P U A 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 25 OP1 U A 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 26 OP2 U A 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 27 O5' U A 251 99.703 118.337 3.952 1.00 51.21 O
TER
ATOM 1 O3' A B 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 2 P U B 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 3 OP1 U B 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 4 OP2 U B 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 5 O5' U B 251 99.703 118.337 3.952 1.00 51.21 O
ATOM 6 C5' U B 251 99.097 117.095 4.362 1.00 46.79 C
ATOM 7 C4' U B 251 98.379 117.286 5.676 1.00 47.09 C
ATOM 8 O4' U B 251 99.348 117.655 6.696 1.00 46.75 O
ATOM 9 C3' U B 251 97.343 118.403 5.672 1.00 46.92 C
ATOM 10 O3' U B 251 96.287 118.066 6.560 1.00 48.36 O
ATOM 11 C2' U B 251 98.138 119.601 6.182 1.00 45.85 C
ATOM 12 O2' U B 251 97.330 120.601 6.762 1.00 42.38 O
ATOM 13 C1' U B 251 99.037 118.934 7.214 1.00 45.43 C
ATOM 14 N1 U B 251 100.300 119.624 7.514 1.00 47.23 N
ATOM 15 C2 U B 251 100.540 119.956 8.834 1.00 48.60 C
ATOM 16 O2 U B 251 99.734 119.756 9.722 1.00 49.46 O
ATOM 17 N3 U B 251 101.761 120.530 9.078 1.00 51.24 N
ATOM 18 C4 U B 251 102.750 120.802 8.160 1.00 50.28 C
ATOM 19 O4 U B 251 103.817 121.292 8.548 1.00 52.38 O
ATOM 20 C5 U B 251 102.414 120.467 6.809 1.00 47.67 C
ATOM 21 C6 U B 251 101.228 119.907 6.538 1.00 46.68 C
ATOM 22 P G B 252 94.967 117.369 5.976 1.00 47.25 P
ATOM 23 OP1 G B 252 93.799 117.744 6.803 1.00 49.12 O
ATOM 24 OP2 G B 252 95.275 115.940 5.745 1.00 47.89 O
ATOM 25 O5' G B 252 94.804 118.059 4.560 1.00 49.00 O
TER
ATOM 2 P A A 250 96.434 122.733 3.645 1.00 55.75 P
ATOM 3 OP1 A A 250 96.626 122.652 5.106 1.00 58.49 O
ATOM 4 OP2 A A 250 97.069 123.848 2.889 1.00 58.21 O
ATOM 5 O5' A A 250 96.968 121.369 3.028 1.00 54.95 O
ATOM 6 C5' A A 250 96.608 120.972 1.693 1.00 52.98 C
ATOM 7 C4' A A 250 97.354 119.715 1.308 1.00 52.52 C
ATOM 8 O4' A A 250 96.908 119.276 -0.004 1.00 54.49 O
ATOM 9 C3' A A 250 98.866 119.865 1.203 1.00 51.82 C
ATOM 10 O3' A A 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 11 C2' A A 250 99.047 120.219 -0.272 1.00 53.56 C
ATOM 12 O2' A A 250 100.333 119.908 -0.767 1.00 54.54 O
ATOM 13 C1' A A 250 97.993 119.317 -0.914 1.00 55.27 C
ATOM 14 N9 A A 250 97.485 119.759 -2.213 1.00 56.55 N
ATOM 15 C8 A A 250 97.600 119.098 -3.410 1.00 56.57 C
ATOM 16 N7 A A 250 97.015 119.710 -4.411 1.00 57.49 N
ATOM 17 C5 A A 250 96.483 120.856 -3.838 1.00 57.45 C
ATOM 18 C6 A A 250 95.734 121.922 -4.371 1.00 57.60 C
ATOM 19 N6 A A 250 95.369 122.008 -5.653 1.00 56.67 N
ATOM 20 N1 A A 250 95.363 122.909 -3.528 1.00 58.81 N
ATOM 21 C2 A A 250 95.720 122.821 -2.242 1.00 58.78 C
ATOM 22 N3 A A 250 96.419 121.870 -1.623 1.00 58.69 N
ATOM 23 C4 A A 250 96.774 120.905 -2.486 1.00 57.53 C
ATOM 24 P U A 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 25 OP1 U A 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 26 OP2 U A 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 27 O5' U A 251 99.703 118.337 3.952 1.00 51.21 O
TER
ATOM 1 O3' A B 250 99.454 118.594 1.470 1.00 49.94 O
ATOM 2 P U B 251 100.567 118.442 2.617 1.00 51.92 P
ATOM 3 OP1 U B 251 101.366 119.697 2.706 1.00 50.80 O
ATOM 4 OP2 U B 251 101.266 117.137 2.405 1.00 47.60 O
ATOM 5 O5' U B 251 99.703 118.337 3.952 1.00 51.21 O
ATOM 6 C5' U B 251 99.097 117.095 4.362 1.00 46.79 C
ATOM 7 C4' U B 251 98.379 117.286 5.676 1.00 47.09 C
ATOM 8 O4' U B 251 99.348 117.655 6.696 1.00 46.75 O
ATOM 9 C3' U B 251 97.343 118.403 5.672 1.00 46.92 C
ATOM 10 O3' U B 251 96.287 118.066 6.560 1.00 48.36 O
ATOM 11 C2' U B 251 98.138 119.601 6.182 1.00 45.85 C
ATOM 12 O2' U B 251 97.330 120.601 6.762 1.00 42.38 O
ATOM 13 C1' U B 251 99.037 118.934 7.214 1.00 45.43 C
ATOM 14 N1 U B 251 100.300 119.624 7.514 1.00 47.23 N
ATOM 15 C2 U B 251 100.540 119.956 8.834 1.00 48.60 C
ATOM 16 O2 U B 251 99.734 119.756 9.722 1.00 49.46 O
ATOM 17 N3 U B 251 101.761 120.530 9.078 1.00 51.24 N
ATOM 18 C4 U B 251 102.750 120.802 8.160 1.00 50.28 C
ATOM 19 O4 U B 251 103.817 121.292 8.548 1.00 52.38 O
ATOM 20 C5 U B 251 102.414 120.467 6.809 1.00 47.67 C
ATOM 21 C6 U B 251 101.228 119.907 6.538 1.00 46.68 C
ATOM 22 P G B 252 94.967 117.369 5.976 1.00 47.25 P
ATOM 23 OP1 G B 252 93.799 117.744 6.803 1.00 49.12 O
ATOM 24 OP2 G B 252 95.275 115.940 5.745 1.00 47.89 O
ATOM 25 O5' G B 252 94.804 118.059 4.560 1.00 49.00 O
TER
Atoms:
OP1: (96.626,122.652,5.106)
OP2: (97.069,123.848,2.889)
C3': (98.866,119.865,1.203)
C1': (97.993,119.317,-0.914)
C5': (96.608,120.972,1.693)
O4': (96.908,119.276,-0.004)
C8: (97.600,119.098,-3.410)
O2': (100.333,119.908,-0.767)
C6: (95.734,121.922,-4.371)
C5: (96.483,120.856,-3.838)
C4: (96.774,120.905,-2.486)
P: (96.434,122.733,3.645)
C4': (97.354,119.715,1.308)
C2': (99.047,120.219,-0.272)
C2: (95.720,122.821,-2.242)
N1: (95.363,122.909,-3.528)
N3: (96.419,121.870,-1.623)
N6: (95.369,122.008,-5.653)
N7: (97.015,119.710,-4.411)
N9: (97.485,119.759,-2.213)
O5': (96.968,121.369,3.028)
O3': (99.454,118.594,1.470)
OP2: (97.069,123.848,2.889)
C3': (98.866,119.865,1.203)
C1': (97.993,119.317,-0.914)
C5': (96.608,120.972,1.693)
O4': (96.908,119.276,-0.004)
C8: (97.600,119.098,-3.410)
O2': (100.333,119.908,-0.767)
C6: (95.734,121.922,-4.371)
C5: (96.483,120.856,-3.838)
C4: (96.774,120.905,-2.486)
P: (96.434,122.733,3.645)
C4': (97.354,119.715,1.308)
C2': (99.047,120.219,-0.272)
C2: (95.720,122.821,-2.242)
N1: (95.363,122.909,-3.528)
N3: (96.419,121.870,-1.623)
N6: (95.369,122.008,-5.653)
N7: (97.015,119.710,-4.411)
N9: (97.485,119.759,-2.213)
O5': (96.968,121.369,3.028)
O3': (99.454,118.594,1.470)
C4: (102.750,120.802,8.160)
N3: (101.761,120.530,9.078)
OP1: (101.366,119.697,2.706)
OP2: (101.266,117.137,2.405)
C2: (100.540,119.956,8.834)
C1': (99.037,118.934,7.214)
C3': (97.343,118.403,5.672)
O5': (99.703,118.337,3.952)
O4': (99.348,117.655,6.696)
C5': (99.097,117.095,4.362)
P: (100.567,118.442,2.617)
C4': (98.379,117.286,5.676)
C2': (98.138,119.601,6.182)
O2': (97.330,120.601,6.762)
N1: (100.300,119.624,7.514)
O4: (103.817,121.292,8.548)
O2: (99.734,119.756,9.722)
C6: (101.228,119.907,6.538)
C5: (102.414,120.467,6.809)
O3': (96.287,118.066,6.560)
N3: (101.761,120.530,9.078)
OP1: (101.366,119.697,2.706)
OP2: (101.266,117.137,2.405)
C2: (100.540,119.956,8.834)
C1': (99.037,118.934,7.214)
C3': (97.343,118.403,5.672)
O5': (99.703,118.337,3.952)
O4': (99.348,117.655,6.696)
C5': (99.097,117.095,4.362)
P: (100.567,118.442,2.617)
C4': (98.379,117.286,5.676)
C2': (98.138,119.601,6.182)
O2': (97.330,120.601,6.762)
N1: (100.300,119.624,7.514)
O4: (103.817,121.292,8.548)
O2: (99.734,119.756,9.722)
C6: (101.228,119.907,6.538)
C5: (102.414,120.467,6.809)
O3': (96.287,118.066,6.560)
Image (generated by PyMOL):