ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:035:036

Extra

PDB:
ATOM 1 O3' G A 34 69.177 142.317 24.865 1.00 32.04 O
ATOM 2 P A A 35 69.853 142.277 23.403 1.00 31.09 P
ATOM 3 OP1 A A 35 68.822 142.618 22.393 1.00 29.92 O
ATOM 4 OP2 A A 35 70.605 141.011 23.263 1.00 32.27 O
ATOM 5 O5' A A 35 70.929 143.454 23.466 1.00 33.08 O
ATOM 6 C5' A A 35 71.904 143.507 24.528 1.00 32.23 C
ATOM 7 C4' A A 35 73.046 144.432 24.168 1.00 31.70 C
ATOM 8 O4' A A 35 73.948 144.530 25.301 1.00 32.21 O
ATOM 9 C3' A A 35 73.921 144.002 22.998 1.00 32.53 C
ATOM 10 O3' A A 35 74.500 145.176 22.445 1.00 36.61 O
ATOM 11 C2' A A 35 75.023 143.208 23.682 1.00 31.20 C
ATOM 12 O2' A A 35 76.217 143.166 22.929 1.00 27.74 O
ATOM 13 C1' A A 35 75.227 144.042 24.940 1.00 32.11 C
ATOM 14 N9 A A 35 75.782 143.329 26.089 1.00 33.46 N
ATOM 15 C8 A A 35 76.851 143.727 26.842 1.00 33.87 C
ATOM 16 N7 A A 35 77.095 142.952 27.865 1.00 35.33 N
ATOM 17 C5 A A 35 76.127 141.963 27.774 1.00 34.49 C
ATOM 18 C6 A A 35 75.835 140.852 28.579 1.00 33.50 C
ATOM 19 N6 A A 35 76.503 140.549 29.696 1.00 30.17 N
ATOM 20 N1 A A 35 74.812 140.057 28.200 1.00 34.01 N
ATOM 21 C2 A A 35 74.132 140.371 27.095 1.00 33.46 C
ATOM 22 N3 A A 35 74.302 141.393 26.266 1.00 34.94 N
ATOM 23 C4 A A 35 75.328 142.165 26.668 1.00 34.50 C
ATOM 24 P U A 36 74.339 145.495 20.883 1.00 38.40 P
ATOM 25 OP1 U A 36 74.455 144.216 20.130 1.00 38.90 O
ATOM 26 OP2 U A 36 75.289 146.595 20.604 1.00 38.11 O
ATOM 27 O5' U A 36 72.853 146.055 20.765 1.00 37.06 O
TER

ATOM 1 O3' A B 35 74.500 145.176 22.445 1.00 36.61 O
ATOM 2 P U B 36 74.339 145.495 20.883 1.00 38.40 P
ATOM 3 OP1 U B 36 74.455 144.216 20.130 1.00 38.90 O
ATOM 4 OP2 U B 36 75.289 146.595 20.604 1.00 38.11 O
ATOM 5 O5' U B 36 72.853 146.055 20.765 1.00 37.06 O
ATOM 6 C5' U B 36 72.529 147.354 21.277 1.00 40.58 C
ATOM 7 C4' U B 36 71.050 147.612 21.168 1.00 44.35 C
ATOM 8 O4' U B 36 70.648 147.528 19.775 1.00 47.94 O
ATOM 9 C3' U B 36 70.139 146.650 21.921 1.00 46.25 C
ATOM 10 O3' U B 36 69.003 147.365 22.357 1.00 43.95 O
ATOM 11 C2' U B 36 69.696 145.681 20.836 1.00 49.30 C
ATOM 12 O2' U B 36 68.447 145.074 21.112 1.00 51.03 O
ATOM 13 C1' U B 36 69.569 146.628 19.650 1.00 50.45 C
ATOM 14 N1 U B 36 69.638 145.971 18.340 1.00 53.58 N
ATOM 15 C2 U B 36 68.540 146.103 17.509 1.00 55.57 C
ATOM 16 O2 U B 36 67.538 146.737 17.822 1.00 54.56 O
ATOM 17 N3 U B 36 68.653 145.465 16.300 1.00 58.33 N
ATOM 18 C4 U B 36 69.727 144.720 15.848 1.00 59.75 C
ATOM 19 O4 U B 36 69.670 144.188 14.733 1.00 62.43 O
ATOM 20 C5 U B 36 70.824 144.633 16.768 1.00 58.22 C
ATOM 21 C6 U B 36 70.745 145.247 17.950 1.00 55.39 C
ATOM 22 P G B 37 69.003 148.015 23.810 1.00 44.08 P
ATOM 23 OP1 G B 37 67.609 147.993 24.315 1.00 43.88 O
ATOM 24 OP2 G B 37 69.742 149.298 23.719 1.00 45.34 O
ATOM 25 O5' G B 37 69.912 147.032 24.669 1.00 43.45 O
TER

Atoms:
OP1: (68.822,142.618,22.393)
OP2: (70.605,141.011,23.263)
C3': (73.921,144.002,22.998)
C1': (75.227,144.042,24.940)
C5': (71.904,143.507,24.528)
O4': (73.948,144.530,25.301)
C8: (76.851,143.727,26.842)
O2': (76.217,143.166,22.929)
C6: (75.835,140.852,28.579)
C5: (76.127,141.963,27.774)
C4: (75.328,142.165,26.668)
P: (69.853,142.277,23.403)
C4': (73.046,144.432,24.168)
C2': (75.023,143.208,23.682)
C2: (74.132,140.371,27.095)
N1: (74.812,140.057,28.200)
N3: (74.302,141.393,26.266)
N6: (76.503,140.549,29.696)
N7: (77.095,142.952,27.865)
N9: (75.782,143.329,26.089)
O5': (70.929,143.454,23.466)
O3': (74.500,145.176,22.445)
C4: (69.727,144.720,15.848)
N3: (68.653,145.465,16.300)
OP1: (74.455,144.216,20.130)
OP2: (75.289,146.595,20.604)
C2: (68.540,146.103,17.509)
C1': (69.569,146.628,19.650)
C3': (70.139,146.650,21.921)
O5': (72.853,146.055,20.765)
O4': (70.648,147.528,19.775)
C5': (72.529,147.354,21.277)
P: (74.339,145.495,20.883)
C4': (71.050,147.612,21.168)
C2': (69.696,145.681,20.836)
O2': (68.447,145.074,21.112)
N1: (69.638,145.971,18.340)
O4: (69.670,144.188,14.733)
O2: (67.538,146.737,17.822)
C6: (70.745,145.247,17.950)
C5: (70.824,144.633,16.768)
O3': (69.003,147.365,22.357)
Image (generated by PyMOL):
PyMOL image
show in jmol