Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A1680:A2672
Extra
PDB:
ATOM 1 O3' C A1679 -49.504 -52.138 -18.573 1.00 33.72 O
ATOM 2 P G A1680 -50.201 -51.011 -19.471 1.00 31.04 P
ATOM 3 OP1 G A1680 -49.367 -49.796 -19.315 1.00 44.80 O
ATOM 4 OP2 G A1680 -51.635 -50.992 -19.113 1.00 38.57 O
ATOM 5 O5' G A1680 -50.115 -51.533 -20.970 1.00 29.62 O
ATOM 6 C5' G A1680 -48.869 -51.435 -21.588 1.00 42.80 C
ATOM 7 C4' G A1680 -48.822 -52.314 -22.809 1.00 41.28 C
ATOM 8 O4' G A1680 -49.323 -53.615 -22.449 1.00 47.03 O
ATOM 9 C3' G A1680 -49.763 -51.905 -23.915 1.00 47.82 C
ATOM 10 O3' G A1680 -49.238 -50.794 -24.628 1.00 50.78 O
ATOM 11 C2' G A1680 -49.742 -53.182 -24.739 1.00 47.78 C
ATOM 12 O2' G A1680 -48.531 -53.302 -25.454 1.00 48.35 O
ATOM 13 C1' G A1680 -49.787 -54.235 -23.632 1.00 49.51 C
ATOM 14 N9 G A1680 -51.114 -54.780 -23.369 1.00 50.65 N
ATOM 15 C8 G A1680 -51.889 -54.590 -22.251 1.00 54.91 C
ATOM 16 N7 G A1680 -53.033 -55.214 -22.300 1.00 57.61 N
ATOM 17 C5 G A1680 -53.003 -55.856 -23.529 1.00 55.88 C
ATOM 18 C6 G A1680 -53.962 -56.680 -24.140 1.00 56.41 C
ATOM 19 O6 G A1680 -55.062 -57.012 -23.691 1.00 69.93 O
ATOM 20 N1 G A1680 -53.544 -57.129 -25.385 1.00 53.82 N
ATOM 21 C2 G A1680 -52.342 -56.816 -25.967 1.00 60.14 C
ATOM 22 N2 G A1680 -52.099 -57.338 -27.177 1.00 63.62 N
ATOM 23 N3 G A1680 -51.434 -56.040 -25.405 1.00 63.63 N
ATOM 24 C4 G A1680 -51.834 -55.601 -24.196 1.00 57.80 C
ATOM 25 P C A1681 -50.296 -49.681 -25.066 1.00 61.47 P
ATOM 26 OP1 C A1681 -49.575 -48.419 -25.356 1.00 63.93 O
ATOM 27 OP2 C A1681 -51.402 -49.729 -24.079 1.00 64.24 O
ATOM 28 O5' C A1681 -50.869 -50.286 -26.428 1.00 82.67 O
TER
ATOM 1 O3' U B2671 -51.026 -57.489 -30.149 1.00 53.63 O
ATOM 2 P U B2672 -49.445 -57.420 -29.985 1.00 57.58 P
ATOM 3 OP1 U B2672 -49.144 -57.650 -28.549 1.00 59.67 O
ATOM 4 OP2 U B2672 -49.006 -56.191 -30.677 1.00 40.08 O
ATOM 5 O5' U B2672 -48.892 -58.685 -30.812 1.00 60.97 O
ATOM 6 C5' U B2672 -48.889 -59.995 -30.234 1.00 52.22 C
ATOM 7 C4' U B2672 -48.616 -61.094 -31.251 1.00 58.58 C
ATOM 8 O4' U B2672 -49.484 -60.951 -32.403 1.00 60.53 O
ATOM 9 C3' U B2672 -47.231 -61.130 -31.876 1.00 57.68 C
ATOM 10 O3' U B2672 -46.282 -61.720 -31.001 1.00 52.07 O
ATOM 11 C2' U B2672 -47.488 -62.026 -33.084 1.00 66.21 C
ATOM 12 O2' U B2672 -47.477 -63.396 -32.711 1.00 69.36 O
ATOM 13 C1' U B2672 -48.889 -61.592 -33.521 1.00 63.59 C
ATOM 14 N1 U B2672 -48.957 -60.607 -34.634 1.00 62.22 N
ATOM 15 C2 U B2672 -48.492 -59.339 -34.392 1.00 68.54 C
ATOM 16 O2 U B2672 -48.011 -59.013 -33.327 1.00 81.19 O
ATOM 17 N3 U B2672 -48.586 -58.452 -35.430 1.00 58.34 N
ATOM 18 C4 U B2672 -49.112 -58.696 -36.667 1.00 67.27 C
ATOM 19 O4 U B2672 -49.122 -57.777 -37.480 1.00 64.20 O
ATOM 20 C5 U B2672 -49.595 -60.047 -36.848 1.00 72.77 C
ATOM 21 C6 U B2672 -49.507 -60.938 -35.853 1.00 62.79 C
ATOM 22 P U B2673 -44.759 -61.233 -31.075 1.00 54.25 P
ATOM 23 OP1 U B2673 -44.724 -59.870 -31.665 1.00 64.51 O
ATOM 24 OP2 U B2673 -43.968 -62.323 -31.673 1.00 63.41 O
ATOM 25 O5' U B2673 -44.367 -61.128 -29.531 1.00 56.16 O
TER
ATOM 2 P G A1680 -50.201 -51.011 -19.471 1.00 31.04 P
ATOM 3 OP1 G A1680 -49.367 -49.796 -19.315 1.00 44.80 O
ATOM 4 OP2 G A1680 -51.635 -50.992 -19.113 1.00 38.57 O
ATOM 5 O5' G A1680 -50.115 -51.533 -20.970 1.00 29.62 O
ATOM 6 C5' G A1680 -48.869 -51.435 -21.588 1.00 42.80 C
ATOM 7 C4' G A1680 -48.822 -52.314 -22.809 1.00 41.28 C
ATOM 8 O4' G A1680 -49.323 -53.615 -22.449 1.00 47.03 O
ATOM 9 C3' G A1680 -49.763 -51.905 -23.915 1.00 47.82 C
ATOM 10 O3' G A1680 -49.238 -50.794 -24.628 1.00 50.78 O
ATOM 11 C2' G A1680 -49.742 -53.182 -24.739 1.00 47.78 C
ATOM 12 O2' G A1680 -48.531 -53.302 -25.454 1.00 48.35 O
ATOM 13 C1' G A1680 -49.787 -54.235 -23.632 1.00 49.51 C
ATOM 14 N9 G A1680 -51.114 -54.780 -23.369 1.00 50.65 N
ATOM 15 C8 G A1680 -51.889 -54.590 -22.251 1.00 54.91 C
ATOM 16 N7 G A1680 -53.033 -55.214 -22.300 1.00 57.61 N
ATOM 17 C5 G A1680 -53.003 -55.856 -23.529 1.00 55.88 C
ATOM 18 C6 G A1680 -53.962 -56.680 -24.140 1.00 56.41 C
ATOM 19 O6 G A1680 -55.062 -57.012 -23.691 1.00 69.93 O
ATOM 20 N1 G A1680 -53.544 -57.129 -25.385 1.00 53.82 N
ATOM 21 C2 G A1680 -52.342 -56.816 -25.967 1.00 60.14 C
ATOM 22 N2 G A1680 -52.099 -57.338 -27.177 1.00 63.62 N
ATOM 23 N3 G A1680 -51.434 -56.040 -25.405 1.00 63.63 N
ATOM 24 C4 G A1680 -51.834 -55.601 -24.196 1.00 57.80 C
ATOM 25 P C A1681 -50.296 -49.681 -25.066 1.00 61.47 P
ATOM 26 OP1 C A1681 -49.575 -48.419 -25.356 1.00 63.93 O
ATOM 27 OP2 C A1681 -51.402 -49.729 -24.079 1.00 64.24 O
ATOM 28 O5' C A1681 -50.869 -50.286 -26.428 1.00 82.67 O
TER
ATOM 1 O3' U B2671 -51.026 -57.489 -30.149 1.00 53.63 O
ATOM 2 P U B2672 -49.445 -57.420 -29.985 1.00 57.58 P
ATOM 3 OP1 U B2672 -49.144 -57.650 -28.549 1.00 59.67 O
ATOM 4 OP2 U B2672 -49.006 -56.191 -30.677 1.00 40.08 O
ATOM 5 O5' U B2672 -48.892 -58.685 -30.812 1.00 60.97 O
ATOM 6 C5' U B2672 -48.889 -59.995 -30.234 1.00 52.22 C
ATOM 7 C4' U B2672 -48.616 -61.094 -31.251 1.00 58.58 C
ATOM 8 O4' U B2672 -49.484 -60.951 -32.403 1.00 60.53 O
ATOM 9 C3' U B2672 -47.231 -61.130 -31.876 1.00 57.68 C
ATOM 10 O3' U B2672 -46.282 -61.720 -31.001 1.00 52.07 O
ATOM 11 C2' U B2672 -47.488 -62.026 -33.084 1.00 66.21 C
ATOM 12 O2' U B2672 -47.477 -63.396 -32.711 1.00 69.36 O
ATOM 13 C1' U B2672 -48.889 -61.592 -33.521 1.00 63.59 C
ATOM 14 N1 U B2672 -48.957 -60.607 -34.634 1.00 62.22 N
ATOM 15 C2 U B2672 -48.492 -59.339 -34.392 1.00 68.54 C
ATOM 16 O2 U B2672 -48.011 -59.013 -33.327 1.00 81.19 O
ATOM 17 N3 U B2672 -48.586 -58.452 -35.430 1.00 58.34 N
ATOM 18 C4 U B2672 -49.112 -58.696 -36.667 1.00 67.27 C
ATOM 19 O4 U B2672 -49.122 -57.777 -37.480 1.00 64.20 O
ATOM 20 C5 U B2672 -49.595 -60.047 -36.848 1.00 72.77 C
ATOM 21 C6 U B2672 -49.507 -60.938 -35.853 1.00 62.79 C
ATOM 22 P U B2673 -44.759 -61.233 -31.075 1.00 54.25 P
ATOM 23 OP1 U B2673 -44.724 -59.870 -31.665 1.00 64.51 O
ATOM 24 OP2 U B2673 -43.968 -62.323 -31.673 1.00 63.41 O
ATOM 25 O5' U B2673 -44.367 -61.128 -29.531 1.00 56.16 O
TER
Atoms:
OP1: (-49.367,-49.796,-19.315)
OP2: (-51.635,-50.992,-19.113)
C3': (-49.763,-51.905,-23.915)
C1': (-49.787,-54.235,-23.632)
C5': (-48.869,-51.435,-21.588)
O6: (-55.062,-57.012,-23.691)
O4': (-49.323,-53.615,-22.449)
C8: (-51.889,-54.590,-22.251)
C2: (-52.342,-56.816,-25.967)
C6: (-53.962,-56.680,-24.140)
C5: (-53.003,-55.856,-23.529)
C4: (-51.834,-55.601,-24.196)
P: (-50.201,-51.011,-19.471)
C4': (-48.822,-52.314,-22.809)
C2': (-49.742,-53.182,-24.739)
O2': (-48.531,-53.302,-25.454)
N1: (-53.544,-57.129,-25.385)
N2: (-52.099,-57.338,-27.177)
N3: (-51.434,-56.040,-25.405)
N7: (-53.033,-55.214,-22.300)
N9: (-51.114,-54.780,-23.369)
O5': (-50.115,-51.533,-20.970)
O3': (-49.238,-50.794,-24.628)
OP2: (-51.635,-50.992,-19.113)
C3': (-49.763,-51.905,-23.915)
C1': (-49.787,-54.235,-23.632)
C5': (-48.869,-51.435,-21.588)
O6: (-55.062,-57.012,-23.691)
O4': (-49.323,-53.615,-22.449)
C8: (-51.889,-54.590,-22.251)
C2: (-52.342,-56.816,-25.967)
C6: (-53.962,-56.680,-24.140)
C5: (-53.003,-55.856,-23.529)
C4: (-51.834,-55.601,-24.196)
P: (-50.201,-51.011,-19.471)
C4': (-48.822,-52.314,-22.809)
C2': (-49.742,-53.182,-24.739)
O2': (-48.531,-53.302,-25.454)
N1: (-53.544,-57.129,-25.385)
N2: (-52.099,-57.338,-27.177)
N3: (-51.434,-56.040,-25.405)
N7: (-53.033,-55.214,-22.300)
N9: (-51.114,-54.780,-23.369)
O5': (-50.115,-51.533,-20.970)
O3': (-49.238,-50.794,-24.628)
C4: (-49.112,-58.696,-36.667)
N3: (-48.586,-58.452,-35.430)
OP1: (-49.144,-57.650,-28.549)
OP2: (-49.006,-56.191,-30.677)
C2: (-48.492,-59.339,-34.392)
C1': (-48.889,-61.592,-33.521)
C3': (-47.231,-61.130,-31.876)
O5': (-48.892,-58.685,-30.812)
O4': (-49.484,-60.951,-32.403)
C5': (-48.889,-59.995,-30.234)
P: (-49.445,-57.420,-29.985)
C4': (-48.616,-61.094,-31.251)
C2': (-47.488,-62.026,-33.084)
O2': (-47.477,-63.396,-32.711)
N1: (-48.957,-60.607,-34.634)
O4: (-49.122,-57.777,-37.480)
O2: (-48.011,-59.013,-33.327)
C6: (-49.507,-60.938,-35.853)
C5: (-49.595,-60.047,-36.848)
O3': (-46.282,-61.720,-31.001)
N3: (-48.586,-58.452,-35.430)
OP1: (-49.144,-57.650,-28.549)
OP2: (-49.006,-56.191,-30.677)
C2: (-48.492,-59.339,-34.392)
C1': (-48.889,-61.592,-33.521)
C3': (-47.231,-61.130,-31.876)
O5': (-48.892,-58.685,-30.812)
O4': (-49.484,-60.951,-32.403)
C5': (-48.889,-59.995,-30.234)
P: (-49.445,-57.420,-29.985)
C4': (-48.616,-61.094,-31.251)
C2': (-47.488,-62.026,-33.084)
O2': (-47.477,-63.396,-32.711)
N1: (-48.957,-60.607,-34.634)
O4: (-49.122,-57.777,-37.480)
O2: (-48.011,-59.013,-33.327)
C6: (-49.507,-60.938,-35.853)
C5: (-49.595,-60.047,-36.848)
O3': (-46.282,-61.720,-31.001)
Image (generated by PyMOL):