Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A2513:A2457
Extra
PDB:
ATOM 1 O3' U A2512 -120.477 -50.309 -44.447 1.00112.55 O
ATOM 2 P G A2513 -120.605 -49.487 -45.826 1.00107.78 P
ATOM 3 OP1 G A2513 -121.902 -49.825 -46.449 1.00 93.42 O
ATOM 4 OP2 G A2513 -119.368 -49.619 -46.624 1.00110.79 O
ATOM 5 O5' G A2513 -120.667 -47.997 -45.237 1.00101.11 O
ATOM 6 C5' G A2513 -120.252 -46.840 -45.959 1.00 97.95 C
ATOM 7 C4' G A2513 -119.720 -45.787 -44.997 1.00103.88 C
ATOM 8 O4' G A2513 -120.782 -45.190 -44.207 1.00110.09 O
ATOM 9 C3' G A2513 -118.742 -46.356 -43.988 1.00 99.39 C
ATOM 10 O3' G A2513 -117.450 -46.176 -44.499 1.00 98.57 O
ATOM 11 C2' G A2513 -118.991 -45.532 -42.729 1.00101.16 C
ATOM 12 O2' G A2513 -118.279 -44.310 -42.740 1.00102.41 O
ATOM 13 C1' G A2513 -120.485 -45.265 -42.822 1.00 98.66 C
ATOM 14 N9 G A2513 -121.350 -46.289 -42.238 1.00 92.41 N
ATOM 15 C8 G A2513 -121.199 -47.656 -42.274 1.00 96.92 C
ATOM 16 N7 G A2513 -122.159 -48.310 -41.678 1.00 93.90 N
ATOM 17 C5 G A2513 -123.007 -47.314 -41.222 1.00 98.37 C
ATOM 18 C6 G A2513 -124.220 -47.411 -40.504 1.00 98.79 C
ATOM 19 O6 G A2513 -124.797 -48.433 -40.117 1.00102.46 O
ATOM 20 N1 G A2513 -124.762 -46.155 -40.241 1.00104.44 N
ATOM 21 C2 G A2513 -124.201 -44.958 -40.629 1.00103.78 C
ATOM 22 N2 G A2513 -124.867 -43.843 -40.291 1.00106.63 N
ATOM 23 N3 G A2513 -123.064 -44.855 -41.303 1.00 95.45 N
ATOM 24 C4 G A2513 -122.525 -46.068 -41.562 1.00 95.63 C
ATOM 25 P A A2514 -116.232 -46.956 -43.831 1.00109.52 P
ATOM 26 OP1 A A2514 -116.634 -47.404 -42.476 1.00102.09 O
ATOM 27 OP2 A A2514 -115.044 -46.092 -44.021 1.00100.33 O
ATOM 28 O5' A A2514 -116.089 -48.260 -44.745 1.00 97.55 O
TER
ATOM 1 O3' G B2456 -124.496 -39.289 -38.581 1.00157.79 O
ATOM 2 P U B2457 -125.096 -39.564 -40.045 1.00148.48 P
ATOM 3 OP1 U B2457 -124.859 -40.973 -40.406 1.00130.96 O
ATOM 4 OP2 U B2457 -124.582 -38.500 -40.932 1.00142.72 O
ATOM 5 O5' U B2457 -126.666 -39.318 -39.872 1.00141.36 O
ATOM 6 C5' U B2457 -127.112 -38.047 -39.397 1.00141.88 C
ATOM 7 C4' U B2457 -128.390 -37.551 -40.064 1.00151.52 C
ATOM 8 O4' U B2457 -128.183 -37.291 -41.482 1.00145.56 O
ATOM 9 C3' U B2457 -129.599 -38.480 -40.001 1.00145.29 C
ATOM 10 O3' U B2457 -130.275 -38.345 -38.751 1.00148.70 O
ATOM 11 C2' U B2457 -130.434 -37.901 -41.133 1.00143.83 C
ATOM 12 O2' U B2457 -131.093 -36.711 -40.749 1.00132.24 O
ATOM 13 C1' U B2457 -129.370 -37.603 -42.191 1.00150.10 C
ATOM 14 N1 U B2457 -129.072 -38.744 -43.118 1.00157.22 N
ATOM 15 C2 U B2457 -130.058 -39.646 -43.480 1.00146.54 C
ATOM 16 O2 U B2457 -131.211 -39.598 -43.094 1.00135.89 O
ATOM 17 N3 U B2457 -129.646 -40.638 -44.332 1.00145.38 N
ATOM 18 C4 U B2457 -128.379 -40.819 -44.849 1.00144.45 C
ATOM 19 O4 U B2457 -128.166 -41.758 -45.603 1.00131.32 O
ATOM 20 C5 U B2457 -127.405 -39.846 -44.433 1.00148.57 C
ATOM 21 C6 U B2457 -127.784 -38.868 -43.603 1.00146.61 C
ATOM 22 P C B2458 -131.290 -39.466 -38.215 1.00193.08 P
ATOM 23 OP1 C B2458 -132.480 -38.777 -37.668 1.00164.18 O
ATOM 24 OP2 C B2458 -130.521 -40.380 -37.346 1.00167.69 O
ATOM 25 O5' C B2458 -131.723 -40.268 -39.530 1.00152.37 O
TER
ATOM 2 P G A2513 -120.605 -49.487 -45.826 1.00107.78 P
ATOM 3 OP1 G A2513 -121.902 -49.825 -46.449 1.00 93.42 O
ATOM 4 OP2 G A2513 -119.368 -49.619 -46.624 1.00110.79 O
ATOM 5 O5' G A2513 -120.667 -47.997 -45.237 1.00101.11 O
ATOM 6 C5' G A2513 -120.252 -46.840 -45.959 1.00 97.95 C
ATOM 7 C4' G A2513 -119.720 -45.787 -44.997 1.00103.88 C
ATOM 8 O4' G A2513 -120.782 -45.190 -44.207 1.00110.09 O
ATOM 9 C3' G A2513 -118.742 -46.356 -43.988 1.00 99.39 C
ATOM 10 O3' G A2513 -117.450 -46.176 -44.499 1.00 98.57 O
ATOM 11 C2' G A2513 -118.991 -45.532 -42.729 1.00101.16 C
ATOM 12 O2' G A2513 -118.279 -44.310 -42.740 1.00102.41 O
ATOM 13 C1' G A2513 -120.485 -45.265 -42.822 1.00 98.66 C
ATOM 14 N9 G A2513 -121.350 -46.289 -42.238 1.00 92.41 N
ATOM 15 C8 G A2513 -121.199 -47.656 -42.274 1.00 96.92 C
ATOM 16 N7 G A2513 -122.159 -48.310 -41.678 1.00 93.90 N
ATOM 17 C5 G A2513 -123.007 -47.314 -41.222 1.00 98.37 C
ATOM 18 C6 G A2513 -124.220 -47.411 -40.504 1.00 98.79 C
ATOM 19 O6 G A2513 -124.797 -48.433 -40.117 1.00102.46 O
ATOM 20 N1 G A2513 -124.762 -46.155 -40.241 1.00104.44 N
ATOM 21 C2 G A2513 -124.201 -44.958 -40.629 1.00103.78 C
ATOM 22 N2 G A2513 -124.867 -43.843 -40.291 1.00106.63 N
ATOM 23 N3 G A2513 -123.064 -44.855 -41.303 1.00 95.45 N
ATOM 24 C4 G A2513 -122.525 -46.068 -41.562 1.00 95.63 C
ATOM 25 P A A2514 -116.232 -46.956 -43.831 1.00109.52 P
ATOM 26 OP1 A A2514 -116.634 -47.404 -42.476 1.00102.09 O
ATOM 27 OP2 A A2514 -115.044 -46.092 -44.021 1.00100.33 O
ATOM 28 O5' A A2514 -116.089 -48.260 -44.745 1.00 97.55 O
TER
ATOM 1 O3' G B2456 -124.496 -39.289 -38.581 1.00157.79 O
ATOM 2 P U B2457 -125.096 -39.564 -40.045 1.00148.48 P
ATOM 3 OP1 U B2457 -124.859 -40.973 -40.406 1.00130.96 O
ATOM 4 OP2 U B2457 -124.582 -38.500 -40.932 1.00142.72 O
ATOM 5 O5' U B2457 -126.666 -39.318 -39.872 1.00141.36 O
ATOM 6 C5' U B2457 -127.112 -38.047 -39.397 1.00141.88 C
ATOM 7 C4' U B2457 -128.390 -37.551 -40.064 1.00151.52 C
ATOM 8 O4' U B2457 -128.183 -37.291 -41.482 1.00145.56 O
ATOM 9 C3' U B2457 -129.599 -38.480 -40.001 1.00145.29 C
ATOM 10 O3' U B2457 -130.275 -38.345 -38.751 1.00148.70 O
ATOM 11 C2' U B2457 -130.434 -37.901 -41.133 1.00143.83 C
ATOM 12 O2' U B2457 -131.093 -36.711 -40.749 1.00132.24 O
ATOM 13 C1' U B2457 -129.370 -37.603 -42.191 1.00150.10 C
ATOM 14 N1 U B2457 -129.072 -38.744 -43.118 1.00157.22 N
ATOM 15 C2 U B2457 -130.058 -39.646 -43.480 1.00146.54 C
ATOM 16 O2 U B2457 -131.211 -39.598 -43.094 1.00135.89 O
ATOM 17 N3 U B2457 -129.646 -40.638 -44.332 1.00145.38 N
ATOM 18 C4 U B2457 -128.379 -40.819 -44.849 1.00144.45 C
ATOM 19 O4 U B2457 -128.166 -41.758 -45.603 1.00131.32 O
ATOM 20 C5 U B2457 -127.405 -39.846 -44.433 1.00148.57 C
ATOM 21 C6 U B2457 -127.784 -38.868 -43.603 1.00146.61 C
ATOM 22 P C B2458 -131.290 -39.466 -38.215 1.00193.08 P
ATOM 23 OP1 C B2458 -132.480 -38.777 -37.668 1.00164.18 O
ATOM 24 OP2 C B2458 -130.521 -40.380 -37.346 1.00167.69 O
ATOM 25 O5' C B2458 -131.723 -40.268 -39.530 1.00152.37 O
TER
Atoms:
OP1: (-121.902,-49.825,-46.449)
OP2: (-119.368,-49.619,-46.624)
C3': (-118.742,-46.356,-43.988)
C1': (-120.485,-45.265,-42.822)
C5': (-120.252,-46.840,-45.959)
O6: (-124.797,-48.433,-40.117)
O4': (-120.782,-45.190,-44.207)
C8: (-121.199,-47.656,-42.274)
C2: (-124.201,-44.958,-40.629)
C6: (-124.220,-47.411,-40.504)
C5: (-123.007,-47.314,-41.222)
C4: (-122.525,-46.068,-41.562)
P: (-120.605,-49.487,-45.826)
C4': (-119.720,-45.787,-44.997)
C2': (-118.991,-45.532,-42.729)
O2': (-118.279,-44.310,-42.740)
N1: (-124.762,-46.155,-40.241)
N2: (-124.867,-43.843,-40.291)
N3: (-123.064,-44.855,-41.303)
N7: (-122.159,-48.310,-41.678)
N9: (-121.350,-46.289,-42.238)
O5': (-120.667,-47.997,-45.237)
O3': (-117.450,-46.176,-44.499)
OP2: (-119.368,-49.619,-46.624)
C3': (-118.742,-46.356,-43.988)
C1': (-120.485,-45.265,-42.822)
C5': (-120.252,-46.840,-45.959)
O6: (-124.797,-48.433,-40.117)
O4': (-120.782,-45.190,-44.207)
C8: (-121.199,-47.656,-42.274)
C2: (-124.201,-44.958,-40.629)
C6: (-124.220,-47.411,-40.504)
C5: (-123.007,-47.314,-41.222)
C4: (-122.525,-46.068,-41.562)
P: (-120.605,-49.487,-45.826)
C4': (-119.720,-45.787,-44.997)
C2': (-118.991,-45.532,-42.729)
O2': (-118.279,-44.310,-42.740)
N1: (-124.762,-46.155,-40.241)
N2: (-124.867,-43.843,-40.291)
N3: (-123.064,-44.855,-41.303)
N7: (-122.159,-48.310,-41.678)
N9: (-121.350,-46.289,-42.238)
O5': (-120.667,-47.997,-45.237)
O3': (-117.450,-46.176,-44.499)
C4: (-128.379,-40.819,-44.849)
N3: (-129.646,-40.638,-44.332)
OP1: (-124.859,-40.973,-40.406)
OP2: (-124.582,-38.500,-40.932)
C2: (-130.058,-39.646,-43.480)
C1': (-129.370,-37.603,-42.191)
C3': (-129.599,-38.480,-40.001)
O5': (-126.666,-39.318,-39.872)
O4': (-128.183,-37.291,-41.482)
C5': (-127.112,-38.047,-39.397)
P: (-125.096,-39.564,-40.045)
C4': (-128.390,-37.551,-40.064)
C2': (-130.434,-37.901,-41.133)
O2': (-131.093,-36.711,-40.749)
N1: (-129.072,-38.744,-43.118)
O4: (-128.166,-41.758,-45.603)
O2: (-131.211,-39.598,-43.094)
C6: (-127.784,-38.868,-43.603)
C5: (-127.405,-39.846,-44.433)
O3': (-130.275,-38.345,-38.751)
N3: (-129.646,-40.638,-44.332)
OP1: (-124.859,-40.973,-40.406)
OP2: (-124.582,-38.500,-40.932)
C2: (-130.058,-39.646,-43.480)
C1': (-129.370,-37.603,-42.191)
C3': (-129.599,-38.480,-40.001)
O5': (-126.666,-39.318,-39.872)
O4': (-128.183,-37.291,-41.482)
C5': (-127.112,-38.047,-39.397)
P: (-125.096,-39.564,-40.045)
C4': (-128.390,-37.551,-40.064)
C2': (-130.434,-37.901,-41.133)
O2': (-131.093,-36.711,-40.749)
N1: (-129.072,-38.744,-43.118)
O4: (-128.166,-41.758,-45.603)
O2: (-131.211,-39.598,-43.094)
C6: (-127.784,-38.868,-43.603)
C5: (-127.405,-39.846,-44.433)
O3': (-130.275,-38.345,-38.751)
Image (generated by PyMOL):