ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A341:A342

Extra

PDB:
ATOM 1 O3' G A 340 138.000 47.356 4.789 1.00 82.48 O
ATOM 2 P G A 341 136.579 47.974 4.356 1.00 80.46 P
ATOM 3 OP1 G A 341 135.685 47.919 5.542 1.00 53.97 O
ATOM 4 OP2 G A 341 136.135 47.362 3.071 1.00 53.97 O
ATOM 5 O5' G A 341 136.919 49.502 4.089 1.00 80.46 O
ATOM 6 C5' G A 341 137.653 50.268 5.060 1.00 80.46 C
ATOM 7 C4' G A 341 138.720 51.065 4.371 1.00 80.46 C
ATOM 8 O4' G A 341 139.632 50.136 3.768 1.00 80.46 O
ATOM 9 C3' G A 341 138.209 51.939 3.235 1.00 80.46 C
ATOM 10 O3' G A 341 137.917 53.297 3.619 1.00 80.46 O
ATOM 11 C2' G A 341 139.384 51.985 2.265 1.00 80.46 C
ATOM 12 O2' G A 341 140.233 53.100 2.481 1.00 80.46 O
ATOM 13 C1' G A 341 140.126 50.682 2.577 1.00 80.46 C
ATOM 14 N9 G A 341 140.106 49.648 1.554 1.00 53.97 N
ATOM 15 C8 G A 341 139.101 48.761 1.265 1.00 53.97 C
ATOM 16 N7 G A 341 139.404 47.948 0.288 1.00 53.97 N
ATOM 17 C5 G A 341 140.682 48.332 -0.089 1.00 53.97 C
ATOM 18 C6 G A 341 141.530 47.827 -1.101 1.00 53.97 C
ATOM 19 O6 G A 341 141.307 46.925 -1.915 1.00 53.97 O
ATOM 20 N1 G A 341 142.747 48.493 -1.121 1.00 53.97 N
ATOM 21 C2 G A 341 143.099 49.525 -0.281 1.00 53.97 C
ATOM 22 N2 G A 341 144.330 50.042 -0.439 1.00 53.97 N
ATOM 23 N3 G A 341 142.308 50.015 0.648 1.00 53.97 N
ATOM 24 C4 G A 341 141.127 49.375 0.690 1.00 53.97 C
ATOM 25 P C A 342 138.335 53.869 5.081 1.00 45.86 P
ATOM 26 OP1 C A 342 139.464 53.143 5.721 1.00 58.72 O
ATOM 27 OP2 C A 342 137.084 54.110 5.856 1.00 58.72 O
ATOM 28 O5' C A 342 138.935 55.288 4.741 1.00 45.86 O
TER

ATOM 1 O3' G B 341 137.917 53.297 3.619 1.00 80.46 O
ATOM 2 P C B 342 138.335 53.869 5.081 1.00 45.86 P
ATOM 3 OP1 C B 342 139.464 53.143 5.721 1.00 58.72 O
ATOM 4 OP2 C B 342 137.084 54.110 5.856 1.00 58.72 O
ATOM 5 O5' C B 342 138.935 55.288 4.741 1.00 45.86 O
ATOM 6 C5' C B 342 140.085 55.758 5.427 1.00 45.86 C
ATOM 7 C4' C B 342 139.675 56.679 6.536 1.00 45.86 C
ATOM 8 O4' C B 342 139.229 55.920 7.692 1.00 45.86 O
ATOM 9 C3' C B 342 140.808 57.530 7.055 1.00 45.86 C
ATOM 10 O3' C B 342 140.919 58.666 6.231 1.00 45.86 O
ATOM 11 C2' C B 342 140.328 57.877 8.451 1.00 45.86 C
ATOM 12 O2' C B 342 139.354 58.892 8.401 1.00 45.86 O
ATOM 13 C1' C B 342 139.651 56.575 8.878 1.00 45.86 C
ATOM 14 N1 C B 342 140.601 55.703 9.589 1.00 58.72 N
ATOM 15 C2 C B 342 140.969 56.026 10.902 1.00 58.72 C
ATOM 16 O2 C B 342 140.475 57.025 11.439 1.00 58.72 O
ATOM 17 N3 C B 342 141.867 55.246 11.547 1.00 58.72 N
ATOM 18 C4 C B 342 142.404 54.190 10.927 1.00 58.72 C
ATOM 19 N4 C B 342 143.313 53.468 11.585 1.00 58.72 N
ATOM 20 C5 C B 342 142.037 53.833 9.599 1.00 58.72 C
ATOM 21 C6 C B 342 141.137 54.606 8.976 1.00 58.72 C
ATOM 22 P A B 343 142.290 59.506 6.195 1.00 52.41 P
ATOM 23 OP1 A B 343 142.971 59.107 4.929 1.00 50.19 O
ATOM 24 OP2 A B 343 143.032 59.418 7.485 1.00 50.19 O
ATOM 25 O5' A B 343 141.764 61.012 6.142 1.00 52.41 O
TER

Atoms:
OP1: (135.685,47.919,5.542)
OP2: (136.135,47.362,3.071)
C3': (138.209,51.939,3.235)
C1': (140.126,50.682,2.577)
C5': (137.653,50.268,5.060)
O6: (141.307,46.925,-1.915)
O4': (139.632,50.136,3.768)
C8: (139.101,48.761,1.265)
C2: (143.099,49.525,-0.281)
C6: (141.530,47.827,-1.101)
C5: (140.682,48.332,-0.089)
C4: (141.127,49.375,0.690)
P: (136.579,47.974,4.356)
C4': (138.720,51.065,4.371)
C2': (139.384,51.985,2.265)
O2': (140.233,53.100,2.481)
N1: (142.747,48.493,-1.121)
N2: (144.330,50.042,-0.439)
N3: (142.308,50.015,0.648)
N7: (139.404,47.948,0.288)
N9: (140.106,49.648,1.554)
O5': (136.919,49.502,4.089)
O3': (137.917,53.297,3.619)
C2: (140.969,56.026,10.902)
OP1: (139.464,53.143,5.721)
OP2: (137.084,54.110,5.856)
C4: (142.404,54.190,10.927)
O5': (138.935,55.288,4.741)
C3': (140.808,57.530,7.055)
C1': (139.651,56.575,8.878)
O4': (139.229,55.920,7.692)
C5': (140.085,55.758,5.427)
P: (138.335,53.869,5.081)
O2: (140.475,57.025,11.439)
C4': (139.675,56.679,6.536)
C2': (140.328,57.877,8.451)
O2': (139.354,58.892,8.401)
N1: (140.601,55.703,9.589)
N3: (141.867,55.246,11.547)
N4: (143.313,53.468,11.585)
C6: (141.137,54.606,8.976)
C5: (142.037,53.833,9.599)
O3': (140.919,58.666,6.231)
Image (generated by PyMOL):
PyMOL image
show in jmol