ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A341:A342

Extra

PDB:
ATOM 1 O3' G A 340 136.652 46.320 2.906 1.00 72.03 O
ATOM 2 P G A 341 135.401 47.162 2.354 1.00 61.42 P
ATOM 3 OP1 G A 341 134.358 47.069 3.410 1.00 58.50 O
ATOM 4 OP2 G A 341 135.055 46.803 0.945 1.00 58.50 O
ATOM 5 O5' G A 341 135.983 48.639 2.352 1.00 61.42 O
ATOM 6 C5' G A 341 136.898 49.048 3.381 1.00 61.42 C
ATOM 7 C4' G A 341 137.995 49.876 2.789 1.00 61.42 C
ATOM 8 O4' G A 341 138.838 49.039 1.954 1.00 61.42 O
ATOM 9 C3' G A 341 137.495 51.020 1.922 1.00 61.42 C
ATOM 10 O3' G A 341 138.279 52.180 2.159 1.00 61.42 O
ATOM 11 C2' G A 341 137.691 50.484 0.509 1.00 61.42 C
ATOM 12 O2' G A 341 137.914 51.497 -0.440 1.00 61.42 O
ATOM 13 C1' G A 341 138.932 49.607 0.671 1.00 61.42 C
ATOM 14 N9 G A 341 139.028 48.539 -0.320 1.00 58.50 N
ATOM 15 C8 G A 341 138.050 47.643 -0.671 1.00 58.50 C
ATOM 16 N7 G A 341 138.401 46.859 -1.653 1.00 58.50 N
ATOM 17 C5 G A 341 139.694 47.249 -1.959 1.00 58.50 C
ATOM 18 C6 G A 341 140.574 46.775 -2.955 1.00 58.50 C
ATOM 19 O6 G A 341 140.366 45.908 -3.817 1.00 58.50 O
ATOM 20 N1 G A 341 141.800 47.428 -2.903 1.00 58.50 N
ATOM 21 C2 G A 341 142.127 48.423 -2.015 1.00 58.50 C
ATOM 22 N2 G A 341 143.372 48.924 -2.113 1.00 58.50 N
ATOM 23 N3 G A 341 141.300 48.892 -1.095 1.00 58.50 N
ATOM 24 C4 G A 341 140.109 48.264 -1.125 1.00 58.50 C
ATOM 25 P C A 342 138.023 53.053 3.488 1.00 47.46 P
ATOM 26 OP1 C A 342 138.932 52.522 4.556 1.00 48.07 O
ATOM 27 OP2 C A 342 136.557 53.166 3.747 1.00 48.07 O
ATOM 28 O5' C A 342 138.534 54.501 3.096 1.00 47.46 O
TER

ATOM 1 O3' G B 341 138.279 52.180 2.159 1.00 61.42 O
ATOM 2 P C B 342 138.023 53.053 3.488 1.00 47.46 P
ATOM 3 OP1 C B 342 138.932 52.522 4.556 1.00 48.07 O
ATOM 4 OP2 C B 342 136.557 53.166 3.747 1.00 48.07 O
ATOM 5 O5' C B 342 138.534 54.501 3.096 1.00 47.46 O
ATOM 6 C5' C B 342 139.612 55.119 3.809 1.00 47.46 C
ATOM 7 C4' C B 342 139.070 56.066 4.849 1.00 47.46 C
ATOM 8 O4' C B 342 138.446 55.321 5.926 1.00 47.46 O
ATOM 9 C3' C B 342 140.135 56.910 5.512 1.00 47.46 C
ATOM 10 O3' C B 342 140.289 58.094 4.782 1.00 47.46 O
ATOM 11 C2' C B 342 139.535 57.198 6.872 1.00 47.46 C
ATOM 12 O2' C B 342 138.605 58.255 6.820 1.00 47.46 O
ATOM 13 C1' C B 342 138.821 55.880 7.172 1.00 47.46 C
ATOM 14 N1 C B 342 139.745 54.938 7.829 1.00 48.07 N
ATOM 15 C2 C B 342 140.221 55.235 9.112 1.00 48.07 C
ATOM 16 O2 C B 342 139.830 56.266 9.683 1.00 48.07 O
ATOM 17 N3 C B 342 141.099 54.398 9.694 1.00 48.07 N
ATOM 18 C4 C B 342 141.509 53.305 9.048 1.00 48.07 C
ATOM 19 N4 C B 342 142.406 52.526 9.653 1.00 48.07 N
ATOM 20 C5 C B 342 141.026 52.968 7.753 1.00 48.07 C
ATOM 21 C6 C B 342 140.153 53.799 7.190 1.00 48.07 C
ATOM 22 P A B 343 141.752 58.661 4.483 1.00 44.87 P
ATOM 23 OP1 A B 343 142.207 58.017 3.224 1.00 41.96 O
ATOM 24 OP2 A B 343 142.615 58.597 5.688 1.00 41.96 O
ATOM 25 O5' A B 343 141.449 60.205 4.271 1.00 44.87 O
TER

Atoms:
OP1: (134.358,47.069,3.410)
OP2: (135.055,46.803,0.945)
C3': (137.495,51.020,1.922)
C1': (138.932,49.607,0.671)
C5': (136.898,49.048,3.381)
O6: (140.366,45.908,-3.817)
O4': (138.838,49.039,1.954)
C8: (138.050,47.643,-0.671)
C2: (142.127,48.423,-2.015)
C6: (140.574,46.775,-2.955)
C5: (139.694,47.249,-1.959)
C4: (140.109,48.264,-1.125)
P: (135.401,47.162,2.354)
C4': (137.995,49.876,2.789)
C2': (137.691,50.484,0.509)
O2': (137.914,51.497,-0.440)
N1: (141.800,47.428,-2.903)
N2: (143.372,48.924,-2.113)
N3: (141.300,48.892,-1.095)
N7: (138.401,46.859,-1.653)
N9: (139.028,48.539,-0.320)
O5': (135.983,48.639,2.352)
O3': (138.279,52.180,2.159)
C2: (140.221,55.235,9.112)
OP1: (138.932,52.522,4.556)
OP2: (136.557,53.166,3.747)
C4: (141.509,53.305,9.048)
O5': (138.534,54.501,3.096)
C3': (140.135,56.910,5.512)
C1': (138.821,55.880,7.172)
O4': (138.446,55.321,5.926)
C5': (139.612,55.119,3.809)
P: (138.023,53.053,3.488)
O2: (139.830,56.266,9.683)
C4': (139.070,56.066,4.849)
C2': (139.535,57.198,6.872)
O2': (138.605,58.255,6.820)
N1: (139.745,54.938,7.829)
N3: (141.099,54.398,9.694)
N4: (142.406,52.526,9.653)
C6: (140.153,53.799,7.190)
C5: (141.026,52.968,7.753)
O3': (140.289,58.094,4.782)
Image (generated by PyMOL):
PyMOL image
show in jmol