ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:0517:0600

Extra

PDB:
ATOM 1 O3' G A 516 10.419 140.551 94.826 1.00 44.74 O
ATOM 2 P G A 517 10.663 140.716 96.407 1.00 44.64 P
ATOM 3 OP1 G A 517 9.372 140.421 97.075 1.00 44.50 O
ATOM 4 OP2 G A 517 11.338 142.019 96.664 1.00 44.11 O
ATOM 5 O5' G A 517 11.685 139.544 96.753 1.00 42.90 O
ATOM 6 C5' G A 517 11.259 138.171 96.741 1.00 40.03 C
ATOM 7 C4' G A 517 12.443 137.249 96.917 1.00 38.32 C
ATOM 8 O4' G A 517 13.351 137.402 95.794 1.00 38.07 O
ATOM 9 C3' G A 517 13.347 137.497 98.114 1.00 36.22 C
ATOM 10 O3' G A 517 12.812 136.995 99.328 1.00 35.87 O
ATOM 11 C2' G A 517 14.589 136.737 97.690 1.00 36.22 C
ATOM 12 O2' G A 517 14.397 135.342 97.749 1.00 37.62 O
ATOM 13 C1' G A 517 14.681 137.144 96.223 1.00 36.18 C
ATOM 14 N9 G A 517 15.460 138.371 96.116 1.00 34.76 N
ATOM 15 C8 G A 517 14.987 139.661 96.088 1.00 34.35 C
ATOM 16 N7 G A 517 15.939 140.553 96.078 1.00 34.44 N
ATOM 17 C5 G A 517 17.110 139.808 96.080 1.00 33.99 C
ATOM 18 C6 G A 517 18.468 140.226 96.098 1.00 33.43 C
ATOM 19 O6 G A 517 18.919 141.372 96.129 1.00 33.09 O
ATOM 20 N1 G A 517 19.339 139.142 96.089 1.00 32.97 N
ATOM 21 C2 G A 517 18.955 137.825 96.073 1.00 33.90 C
ATOM 22 N2 G A 517 19.944 136.924 96.052 1.00 32.70 N
ATOM 23 N3 G A 517 17.694 137.421 96.075 1.00 34.36 N
ATOM 24 C4 G A 517 16.831 138.459 96.079 1.00 34.41 C
ATOM 25 P C A 518 13.134 137.744 100.715 1.00 36.05 P
ATOM 26 OP1 C A 518 12.344 137.029 101.747 1.00 37.11 O
ATOM 27 OP2 C A 518 12.985 139.210 100.556 1.00 35.04 O
ATOM 28 O5' C A 518 14.673 137.448 100.991 1.00 37.32 O
TER

ATOM 1 O3' U B 599 19.133 133.880 95.472 1.00 37.46 O
ATOM 2 P U B 600 19.960 132.901 96.435 1.00 38.71 P
ATOM 3 OP1 U B 600 21.133 133.689 96.895 1.00 39.93 O
ATOM 4 OP2 U B 600 20.180 131.610 95.742 1.00 38.02 O
ATOM 5 O5' U B 600 18.976 132.650 97.668 1.00 38.20 O
ATOM 6 C5' U B 600 18.705 133.699 98.617 1.00 38.77 C
ATOM 7 C4' U B 600 17.609 133.289 99.578 1.00 39.53 C
ATOM 8 O4' U B 600 16.375 133.053 98.847 1.00 37.81 O
ATOM 9 C3' U B 600 17.803 132.005 100.372 1.00 39.39 C
ATOM 10 O3' U B 600 18.649 132.163 101.506 1.00 38.46 O
ATOM 11 C2' U B 600 16.375 131.682 100.788 1.00 38.79 C
ATOM 12 O2' U B 600 15.920 132.467 101.873 1.00 39.22 O
ATOM 13 C1' U B 600 15.609 132.069 99.525 1.00 37.66 C
ATOM 14 N1 U B 600 15.437 130.908 98.645 1.00 37.14 N
ATOM 15 C2 U B 600 14.385 130.067 98.919 1.00 37.52 C
ATOM 16 O2 U B 600 13.605 130.260 99.835 1.00 38.42 O
ATOM 17 N3 U B 600 14.277 128.985 98.086 1.00 38.25 N
ATOM 18 C4 U B 600 15.093 128.669 97.027 1.00 38.57 C
ATOM 19 O4 U B 600 14.850 127.665 96.359 1.00 40.12 O
ATOM 20 C5 U B 600 16.158 129.592 96.802 1.00 38.35 C
ATOM 21 C6 U B 600 16.289 130.655 97.599 1.00 37.75 C
ATOM 22 P C B 601 19.192 130.860 102.279 1.00 39.04 P
ATOM 23 OP1 C B 601 20.109 131.342 103.345 1.00 37.37 O
ATOM 24 OP2 C B 601 19.676 129.876 101.283 1.00 38.54 O
ATOM 25 O5' C B 601 17.899 130.246 102.975 1.00 39.02 O
TER

Atoms:
OP1: (9.372,140.421,97.075)
OP2: (11.338,142.019,96.664)
C3': (13.347,137.497,98.114)
C1': (14.681,137.144,96.223)
C5': (11.259,138.171,96.741)
O6: (18.919,141.372,96.129)
O4': (13.351,137.402,95.794)
C8: (14.987,139.661,96.088)
C2: (18.955,137.825,96.073)
C6: (18.468,140.226,96.098)
C5: (17.110,139.808,96.080)
C4: (16.831,138.459,96.079)
P: (10.663,140.716,96.407)
C4': (12.443,137.249,96.917)
C2': (14.589,136.737,97.690)
O2': (14.397,135.342,97.749)
N1: (19.339,139.142,96.089)
N2: (19.944,136.924,96.052)
N3: (17.694,137.421,96.075)
N7: (15.939,140.553,96.078)
N9: (15.460,138.371,96.116)
O5': (11.685,139.544,96.753)
O3': (12.812,136.995,99.328)
C4: (15.093,128.669,97.027)
N3: (14.277,128.985,98.086)
OP1: (21.133,133.689,96.895)
OP2: (20.180,131.610,95.742)
C2: (14.385,130.067,98.919)
C1': (15.609,132.069,99.525)
C3': (17.803,132.005,100.372)
O5': (18.976,132.650,97.668)
O4': (16.375,133.053,98.847)
C5': (18.705,133.699,98.617)
P: (19.960,132.901,96.435)
C4': (17.609,133.289,99.578)
C2': (16.375,131.682,100.788)
O2': (15.920,132.467,101.873)
N1: (15.437,130.908,98.645)
O4: (14.850,127.665,96.359)
O2: (13.605,130.260,99.835)
C6: (16.289,130.655,97.599)
C5: (16.158,129.592,96.802)
O3': (18.649,132.163,101.506)
Image (generated by PyMOL):
PyMOL image
show in jmol