Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A11:A564
Extra
PDB:
ATOM 1 O3' G A 10 67.936 -96.645 -3.108 1.00 48.54 O
ATOM 2 P G A 11 67.941 -97.406 -4.546 1.00 39.05 P
ATOM 3 OP1 G A 11 67.964 -96.483 -5.698 1.00 36.74 O
ATOM 4 OP2 G A 11 66.899 -98.443 -4.495 1.00 47.19 O
ATOM 5 O5' G A 11 69.328 -98.189 -4.556 1.00 43.76 O
ATOM 6 C5' G A 11 70.565 -97.508 -4.343 1.00 47.23 C
ATOM 7 C4' G A 11 71.711 -98.486 -4.428 1.00 49.29 C
ATOM 8 O4' G A 11 71.650 -99.436 -3.336 1.00 47.63 O
ATOM 9 C3' G A 11 71.741 -99.340 -5.678 1.00 46.79 C
ATOM 10 O3' G A 11 72.350 -98.607 -6.736 1.00 44.84 O
ATOM 11 C2' G A 11 72.545-100.554 -5.221 1.00 46.80 C
ATOM 12 O2' G A 11 73.929-100.305 -5.154 1.00 52.31 O
ATOM 13 C1' G A 11 72.094-100.699 -3.776 1.00 44.21 C
ATOM 14 N9 G A 11 71.025-101.666 -3.557 1.00 49.72 N
ATOM 15 C8 G A 11 69.701-101.393 -3.303 1.00 53.87 C
ATOM 16 N7 G A 11 68.999-102.461 -3.038 1.00 56.04 N
ATOM 17 C5 G A 11 69.905-103.503 -3.149 1.00 51.28 C
ATOM 18 C6 G A 11 69.728-104.888 -2.953 1.00 51.77 C
ATOM 19 O6 G A 11 68.713-105.481 -2.597 1.00 59.78 O
ATOM 20 N1 G A 11 70.900-105.601 -3.202 1.00 53.55 N
ATOM 21 C2 G A 11 72.094-105.044 -3.586 1.00 54.32 C
ATOM 22 N2 G A 11 73.092-105.896 -3.834 1.00 49.28 N
ATOM 23 N3 G A 11 72.287-103.742 -3.732 1.00 54.93 N
ATOM 24 C4 G A 11 71.153-103.035 -3.503 1.00 52.58 C
ATOM 25 P C A 12 71.731 -98.675 -8.219 1.00 47.48 P
ATOM 26 OP1 C A 12 72.477 -97.697 -9.057 1.00 38.92 O
ATOM 27 OP2 C A 12 70.256 -98.543 -8.103 1.00 58.16 O
ATOM 28 O5' C A 12 72.073-100.168 -8.689 1.00 44.76 O
TER
ATOM 1 O3' U B 563 75.363-106.527 -5.968 1.00 46.43 O
ATOM 2 P U B 564 76.431-105.394 -5.571 1.00 41.47 P
ATOM 3 OP1 U B 564 75.700-104.312 -4.860 1.00 41.41 O
ATOM 4 OP2 U B 564 77.168-105.090 -6.842 1.00 39.91 O
ATOM 5 O5' U B 564 77.333-106.106 -4.463 1.00 44.38 O
ATOM 6 C5' U B 564 76.683-106.733 -3.363 1.00 51.34 C
ATOM 7 C4' U B 564 77.664-107.328 -2.388 1.00 51.67 C
ATOM 8 O4' U B 564 78.384-108.425 -3.001 1.00 51.39 O
ATOM 9 C3' U B 564 78.697-106.389 -1.789 1.00 50.29 C
ATOM 10 O3' U B 564 78.824-106.604 -0.387 1.00 51.87 O
ATOM 11 C2' U B 564 79.980-106.748 -2.537 1.00 54.68 C
ATOM 12 O2' U B 564 81.179-106.531 -1.820 1.00 63.26 O
ATOM 13 C1' U B 564 79.775-108.231 -2.841 1.00 50.75 C
ATOM 14 N1 U B 564 80.417-108.639 -4.096 1.00 52.41 N
ATOM 15 C2 U B 564 81.247-109.741 -4.088 1.00 57.56 C
ATOM 16 O2 U B 564 81.471-110.394 -3.085 1.00 60.87 O
ATOM 17 N3 U B 564 81.801-110.061 -5.303 1.00 57.91 N
ATOM 18 C4 U B 564 81.611-109.411 -6.497 1.00 57.66 C
ATOM 19 O4 U B 564 82.244-109.771 -7.491 1.00 53.96 O
ATOM 20 C5 U B 564 80.733-108.288 -6.426 1.00 58.92 C
ATOM 21 C6 U B 564 80.187-107.946 -5.260 1.00 55.37 C
ATOM 22 P G B 565 79.307-105.396 0.552 1.00 50.70 P
ATOM 23 OP1 G B 565 78.146-104.811 1.271 1.00 52.51 O
ATOM 24 OP2 G B 565 80.218-104.519 -0.232 1.00 54.78 O
ATOM 25 O5' G B 565 80.247-106.094 1.619 1.00 46.95 O
TER
ATOM 2 P G A 11 67.941 -97.406 -4.546 1.00 39.05 P
ATOM 3 OP1 G A 11 67.964 -96.483 -5.698 1.00 36.74 O
ATOM 4 OP2 G A 11 66.899 -98.443 -4.495 1.00 47.19 O
ATOM 5 O5' G A 11 69.328 -98.189 -4.556 1.00 43.76 O
ATOM 6 C5' G A 11 70.565 -97.508 -4.343 1.00 47.23 C
ATOM 7 C4' G A 11 71.711 -98.486 -4.428 1.00 49.29 C
ATOM 8 O4' G A 11 71.650 -99.436 -3.336 1.00 47.63 O
ATOM 9 C3' G A 11 71.741 -99.340 -5.678 1.00 46.79 C
ATOM 10 O3' G A 11 72.350 -98.607 -6.736 1.00 44.84 O
ATOM 11 C2' G A 11 72.545-100.554 -5.221 1.00 46.80 C
ATOM 12 O2' G A 11 73.929-100.305 -5.154 1.00 52.31 O
ATOM 13 C1' G A 11 72.094-100.699 -3.776 1.00 44.21 C
ATOM 14 N9 G A 11 71.025-101.666 -3.557 1.00 49.72 N
ATOM 15 C8 G A 11 69.701-101.393 -3.303 1.00 53.87 C
ATOM 16 N7 G A 11 68.999-102.461 -3.038 1.00 56.04 N
ATOM 17 C5 G A 11 69.905-103.503 -3.149 1.00 51.28 C
ATOM 18 C6 G A 11 69.728-104.888 -2.953 1.00 51.77 C
ATOM 19 O6 G A 11 68.713-105.481 -2.597 1.00 59.78 O
ATOM 20 N1 G A 11 70.900-105.601 -3.202 1.00 53.55 N
ATOM 21 C2 G A 11 72.094-105.044 -3.586 1.00 54.32 C
ATOM 22 N2 G A 11 73.092-105.896 -3.834 1.00 49.28 N
ATOM 23 N3 G A 11 72.287-103.742 -3.732 1.00 54.93 N
ATOM 24 C4 G A 11 71.153-103.035 -3.503 1.00 52.58 C
ATOM 25 P C A 12 71.731 -98.675 -8.219 1.00 47.48 P
ATOM 26 OP1 C A 12 72.477 -97.697 -9.057 1.00 38.92 O
ATOM 27 OP2 C A 12 70.256 -98.543 -8.103 1.00 58.16 O
ATOM 28 O5' C A 12 72.073-100.168 -8.689 1.00 44.76 O
TER
ATOM 1 O3' U B 563 75.363-106.527 -5.968 1.00 46.43 O
ATOM 2 P U B 564 76.431-105.394 -5.571 1.00 41.47 P
ATOM 3 OP1 U B 564 75.700-104.312 -4.860 1.00 41.41 O
ATOM 4 OP2 U B 564 77.168-105.090 -6.842 1.00 39.91 O
ATOM 5 O5' U B 564 77.333-106.106 -4.463 1.00 44.38 O
ATOM 6 C5' U B 564 76.683-106.733 -3.363 1.00 51.34 C
ATOM 7 C4' U B 564 77.664-107.328 -2.388 1.00 51.67 C
ATOM 8 O4' U B 564 78.384-108.425 -3.001 1.00 51.39 O
ATOM 9 C3' U B 564 78.697-106.389 -1.789 1.00 50.29 C
ATOM 10 O3' U B 564 78.824-106.604 -0.387 1.00 51.87 O
ATOM 11 C2' U B 564 79.980-106.748 -2.537 1.00 54.68 C
ATOM 12 O2' U B 564 81.179-106.531 -1.820 1.00 63.26 O
ATOM 13 C1' U B 564 79.775-108.231 -2.841 1.00 50.75 C
ATOM 14 N1 U B 564 80.417-108.639 -4.096 1.00 52.41 N
ATOM 15 C2 U B 564 81.247-109.741 -4.088 1.00 57.56 C
ATOM 16 O2 U B 564 81.471-110.394 -3.085 1.00 60.87 O
ATOM 17 N3 U B 564 81.801-110.061 -5.303 1.00 57.91 N
ATOM 18 C4 U B 564 81.611-109.411 -6.497 1.00 57.66 C
ATOM 19 O4 U B 564 82.244-109.771 -7.491 1.00 53.96 O
ATOM 20 C5 U B 564 80.733-108.288 -6.426 1.00 58.92 C
ATOM 21 C6 U B 564 80.187-107.946 -5.260 1.00 55.37 C
ATOM 22 P G B 565 79.307-105.396 0.552 1.00 50.70 P
ATOM 23 OP1 G B 565 78.146-104.811 1.271 1.00 52.51 O
ATOM 24 OP2 G B 565 80.218-104.519 -0.232 1.00 54.78 O
ATOM 25 O5' G B 565 80.247-106.094 1.619 1.00 46.95 O
TER
Atoms:
OP1: (67.964,-96.483,-5.698)
OP2: (66.899,-98.443,-4.495)
C3': (71.741,-99.340,-5.678)
C1': (72.094,-100.699,-3.776)
C5': (70.565,-97.508,-4.343)
O6: (68.713,-105.481,-2.597)
O4': (71.650,-99.436,-3.336)
C8: (69.701,-101.393,-3.303)
C2: (72.094,-105.044,-3.586)
C6: (69.728,-104.888,-2.953)
C5: (69.905,-103.503,-3.149)
C4: (71.153,-103.035,-3.503)
P: (67.941,-97.406,-4.546)
C4': (71.711,-98.486,-4.428)
C2': (72.545,-100.554,-5.221)
O2': (73.929,-100.305,-5.154)
N1: (70.900,-105.601,-3.202)
N2: (73.092,-105.896,-3.834)
N3: (72.287,-103.742,-3.732)
N7: (68.999,-102.461,-3.038)
N9: (71.025,-101.666,-3.557)
O5': (69.328,-98.189,-4.556)
O3': (72.350,-98.607,-6.736)
OP2: (66.899,-98.443,-4.495)
C3': (71.741,-99.340,-5.678)
C1': (72.094,-100.699,-3.776)
C5': (70.565,-97.508,-4.343)
O6: (68.713,-105.481,-2.597)
O4': (71.650,-99.436,-3.336)
C8: (69.701,-101.393,-3.303)
C2: (72.094,-105.044,-3.586)
C6: (69.728,-104.888,-2.953)
C5: (69.905,-103.503,-3.149)
C4: (71.153,-103.035,-3.503)
P: (67.941,-97.406,-4.546)
C4': (71.711,-98.486,-4.428)
C2': (72.545,-100.554,-5.221)
O2': (73.929,-100.305,-5.154)
N1: (70.900,-105.601,-3.202)
N2: (73.092,-105.896,-3.834)
N3: (72.287,-103.742,-3.732)
N7: (68.999,-102.461,-3.038)
N9: (71.025,-101.666,-3.557)
O5': (69.328,-98.189,-4.556)
O3': (72.350,-98.607,-6.736)
C4: (81.611,-109.411,-6.497)
N3: (81.801,-110.061,-5.303)
OP1: (75.700,-104.312,-4.860)
OP2: (77.168,-105.090,-6.842)
C2: (81.247,-109.741,-4.088)
C1': (79.775,-108.231,-2.841)
C3': (78.697,-106.389,-1.789)
O5': (77.333,-106.106,-4.463)
O4': (78.384,-108.425,-3.001)
C5': (76.683,-106.733,-3.363)
P: (76.431,-105.394,-5.571)
C4': (77.664,-107.328,-2.388)
C2': (79.980,-106.748,-2.537)
O2': (81.179,-106.531,-1.820)
N1: (80.417,-108.639,-4.096)
O4: (82.244,-109.771,-7.491)
O2: (81.471,-110.394,-3.085)
C6: (80.187,-107.946,-5.260)
C5: (80.733,-108.288,-6.426)
O3': (78.824,-106.604,-0.387)
N3: (81.801,-110.061,-5.303)
OP1: (75.700,-104.312,-4.860)
OP2: (77.168,-105.090,-6.842)
C2: (81.247,-109.741,-4.088)
C1': (79.775,-108.231,-2.841)
C3': (78.697,-106.389,-1.789)
O5': (77.333,-106.106,-4.463)
O4': (78.384,-108.425,-3.001)
C5': (76.683,-106.733,-3.363)
P: (76.431,-105.394,-5.571)
C4': (77.664,-107.328,-2.388)
C2': (79.980,-106.748,-2.537)
O2': (81.179,-106.531,-1.820)
N1: (80.417,-108.639,-4.096)
O4: (82.244,-109.771,-7.491)
O2: (81.471,-110.394,-3.085)
C6: (80.187,-107.946,-5.260)
C5: (80.733,-108.288,-6.426)
O3': (78.824,-106.604,-0.387)
Image (generated by PyMOL):