Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A2088:A2089
Extra
PDB:
ATOM 1 O3' U A2087 113.899 -42.614 -26.438 1.00 42.20 O
ATOM 2 P C A2088 114.042 -42.379 -28.012 1.00 48.04 P
ATOM 3 OP1 C A2088 115.456 -42.687 -28.370 1.00 32.05 O
ATOM 4 OP2 C A2088 113.490 -41.024 -28.314 1.00 39.03 O
ATOM 5 O5' C A2088 113.099 -43.487 -28.612 1.00 37.99 O
ATOM 6 C5' C A2088 113.622 -44.752 -28.949 1.00 36.97 C
ATOM 7 C4' C A2088 112.661 -45.520 -29.790 1.00 22.27 C
ATOM 8 O4' C A2088 111.330 -45.253 -29.309 1.00 30.30 O
ATOM 9 C3' C A2088 112.667 -45.150 -31.266 1.00 28.79 C
ATOM 10 O3' C A2088 112.423 -46.312 -32.040 1.00 28.87 O
ATOM 11 C2' C A2088 111.488 -44.204 -31.383 1.00 31.64 C
ATOM 12 O2' C A2088 110.913 -44.150 -32.665 1.00 35.44 O
ATOM 13 C1' C A2088 110.528 -44.798 -30.368 1.00 36.62 C
ATOM 14 N1 C A2088 109.553 -43.843 -29.826 1.00 37.21 N
ATOM 15 C2 C A2088 108.204 -44.094 -30.089 1.00 38.81 C
ATOM 16 O2 C A2088 107.952 -45.100 -30.761 1.00 39.01 O
ATOM 17 N3 C A2088 107.245 -43.255 -29.613 1.00 38.89 N
ATOM 18 C4 C A2088 107.655 -42.204 -28.895 1.00 38.94 C
ATOM 19 N4 C A2088 106.745 -41.387 -28.405 1.00 32.53 N
ATOM 20 C5 C A2088 109.027 -41.929 -28.606 1.00 38.95 C
ATOM 21 C6 C A2088 109.949 -42.772 -29.076 1.00 36.47 C
ATOM 22 P G A2089 113.531 -47.458 -32.123 1.00 41.47 P
ATOM 23 OP1 G A2089 112.834 -48.729 -32.396 1.00 44.37 O
ATOM 24 OP2 G A2089 114.367 -47.359 -30.893 1.00 38.21 O
ATOM 25 O5' G A2089 114.368 -47.018 -33.400 1.00 35.81 O
TER
ATOM 1 O3' C B2088 112.423 -46.312 -32.040 1.00 28.87 O
ATOM 2 P G B2089 113.531 -47.458 -32.123 1.00 41.47 P
ATOM 3 OP1 G B2089 112.834 -48.729 -32.396 1.00 44.37 O
ATOM 4 OP2 G B2089 114.367 -47.359 -30.893 1.00 38.21 O
ATOM 5 O5' G B2089 114.368 -47.018 -33.400 1.00 35.81 O
ATOM 6 C5' G B2089 113.780 -47.053 -34.688 1.00 36.05 C
ATOM 7 C4' G B2089 114.693 -46.492 -35.747 1.00 36.86 C
ATOM 8 O4' G B2089 114.503 -45.057 -35.857 1.00 44.01 O
ATOM 9 C3' G B2089 116.179 -46.654 -35.505 1.00 28.96 C
ATOM 10 O3' G B2089 116.653 -47.909 -35.915 1.00 42.10 O
ATOM 11 C2' G B2089 116.745 -45.540 -36.331 1.00 36.87 C
ATOM 12 O2' G B2089 116.638 -45.882 -37.693 1.00 41.02 O
ATOM 13 C1' G B2089 115.745 -44.434 -36.045 1.00 38.94 C
ATOM 14 N9 G B2089 116.079 -43.699 -34.812 1.00 37.10 N
ATOM 15 C8 G B2089 115.415 -43.808 -33.626 1.00 36.60 C
ATOM 16 N7 G B2089 115.898 -43.058 -32.690 1.00 37.05 N
ATOM 17 C5 G B2089 116.949 -42.405 -33.297 1.00 34.75 C
ATOM 18 C6 G B2089 117.842 -41.453 -32.751 1.00 38.39 C
ATOM 19 O6 G B2089 117.893 -40.973 -31.597 1.00 35.56 O
ATOM 20 N1 G B2089 118.747 -41.067 -33.728 1.00 37.04 N
ATOM 21 C2 G B2089 118.792 -41.523 -35.020 1.00 36.46 C
ATOM 22 N2 G B2089 119.759 -41.016 -35.782 1.00 43.68 N
ATOM 23 N3 G B2089 117.965 -42.401 -35.538 1.00 37.12 N
ATOM 24 C4 G B2089 117.076 -42.792 -34.610 1.00 34.67 C
ATOM 25 P C B2090 118.088 -48.436 -35.417 1.00 51.41 P
ATOM 26 OP1 C B2090 118.419 -49.645 -36.238 1.00 35.86 O
ATOM 27 OP2 C B2090 118.015 -48.563 -33.916 1.00 29.40 O
ATOM 28 O5' C B2090 119.055 -47.246 -35.817 1.00 35.00 O
TER
ATOM 2 P C A2088 114.042 -42.379 -28.012 1.00 48.04 P
ATOM 3 OP1 C A2088 115.456 -42.687 -28.370 1.00 32.05 O
ATOM 4 OP2 C A2088 113.490 -41.024 -28.314 1.00 39.03 O
ATOM 5 O5' C A2088 113.099 -43.487 -28.612 1.00 37.99 O
ATOM 6 C5' C A2088 113.622 -44.752 -28.949 1.00 36.97 C
ATOM 7 C4' C A2088 112.661 -45.520 -29.790 1.00 22.27 C
ATOM 8 O4' C A2088 111.330 -45.253 -29.309 1.00 30.30 O
ATOM 9 C3' C A2088 112.667 -45.150 -31.266 1.00 28.79 C
ATOM 10 O3' C A2088 112.423 -46.312 -32.040 1.00 28.87 O
ATOM 11 C2' C A2088 111.488 -44.204 -31.383 1.00 31.64 C
ATOM 12 O2' C A2088 110.913 -44.150 -32.665 1.00 35.44 O
ATOM 13 C1' C A2088 110.528 -44.798 -30.368 1.00 36.62 C
ATOM 14 N1 C A2088 109.553 -43.843 -29.826 1.00 37.21 N
ATOM 15 C2 C A2088 108.204 -44.094 -30.089 1.00 38.81 C
ATOM 16 O2 C A2088 107.952 -45.100 -30.761 1.00 39.01 O
ATOM 17 N3 C A2088 107.245 -43.255 -29.613 1.00 38.89 N
ATOM 18 C4 C A2088 107.655 -42.204 -28.895 1.00 38.94 C
ATOM 19 N4 C A2088 106.745 -41.387 -28.405 1.00 32.53 N
ATOM 20 C5 C A2088 109.027 -41.929 -28.606 1.00 38.95 C
ATOM 21 C6 C A2088 109.949 -42.772 -29.076 1.00 36.47 C
ATOM 22 P G A2089 113.531 -47.458 -32.123 1.00 41.47 P
ATOM 23 OP1 G A2089 112.834 -48.729 -32.396 1.00 44.37 O
ATOM 24 OP2 G A2089 114.367 -47.359 -30.893 1.00 38.21 O
ATOM 25 O5' G A2089 114.368 -47.018 -33.400 1.00 35.81 O
TER
ATOM 1 O3' C B2088 112.423 -46.312 -32.040 1.00 28.87 O
ATOM 2 P G B2089 113.531 -47.458 -32.123 1.00 41.47 P
ATOM 3 OP1 G B2089 112.834 -48.729 -32.396 1.00 44.37 O
ATOM 4 OP2 G B2089 114.367 -47.359 -30.893 1.00 38.21 O
ATOM 5 O5' G B2089 114.368 -47.018 -33.400 1.00 35.81 O
ATOM 6 C5' G B2089 113.780 -47.053 -34.688 1.00 36.05 C
ATOM 7 C4' G B2089 114.693 -46.492 -35.747 1.00 36.86 C
ATOM 8 O4' G B2089 114.503 -45.057 -35.857 1.00 44.01 O
ATOM 9 C3' G B2089 116.179 -46.654 -35.505 1.00 28.96 C
ATOM 10 O3' G B2089 116.653 -47.909 -35.915 1.00 42.10 O
ATOM 11 C2' G B2089 116.745 -45.540 -36.331 1.00 36.87 C
ATOM 12 O2' G B2089 116.638 -45.882 -37.693 1.00 41.02 O
ATOM 13 C1' G B2089 115.745 -44.434 -36.045 1.00 38.94 C
ATOM 14 N9 G B2089 116.079 -43.699 -34.812 1.00 37.10 N
ATOM 15 C8 G B2089 115.415 -43.808 -33.626 1.00 36.60 C
ATOM 16 N7 G B2089 115.898 -43.058 -32.690 1.00 37.05 N
ATOM 17 C5 G B2089 116.949 -42.405 -33.297 1.00 34.75 C
ATOM 18 C6 G B2089 117.842 -41.453 -32.751 1.00 38.39 C
ATOM 19 O6 G B2089 117.893 -40.973 -31.597 1.00 35.56 O
ATOM 20 N1 G B2089 118.747 -41.067 -33.728 1.00 37.04 N
ATOM 21 C2 G B2089 118.792 -41.523 -35.020 1.00 36.46 C
ATOM 22 N2 G B2089 119.759 -41.016 -35.782 1.00 43.68 N
ATOM 23 N3 G B2089 117.965 -42.401 -35.538 1.00 37.12 N
ATOM 24 C4 G B2089 117.076 -42.792 -34.610 1.00 34.67 C
ATOM 25 P C B2090 118.088 -48.436 -35.417 1.00 51.41 P
ATOM 26 OP1 C B2090 118.419 -49.645 -36.238 1.00 35.86 O
ATOM 27 OP2 C B2090 118.015 -48.563 -33.916 1.00 29.40 O
ATOM 28 O5' C B2090 119.055 -47.246 -35.817 1.00 35.00 O
TER
Atoms:
C2: (108.204,-44.094,-30.089)
OP1: (115.456,-42.687,-28.370)
OP2: (113.490,-41.024,-28.314)
C4: (107.655,-42.204,-28.895)
O5': (113.099,-43.487,-28.612)
C3': (112.667,-45.150,-31.266)
C1': (110.528,-44.798,-30.368)
O4': (111.330,-45.253,-29.309)
C5': (113.622,-44.752,-28.949)
P: (114.042,-42.379,-28.012)
O2: (107.952,-45.100,-30.761)
C4': (112.661,-45.520,-29.790)
C2': (111.488,-44.204,-31.383)
O2': (110.913,-44.150,-32.665)
N1: (109.553,-43.843,-29.826)
N3: (107.245,-43.255,-29.613)
N4: (106.745,-41.387,-28.405)
C6: (109.949,-42.772,-29.076)
C5: (109.027,-41.929,-28.606)
O3': (112.423,-46.312,-32.040)
OP1: (115.456,-42.687,-28.370)
OP2: (113.490,-41.024,-28.314)
C4: (107.655,-42.204,-28.895)
O5': (113.099,-43.487,-28.612)
C3': (112.667,-45.150,-31.266)
C1': (110.528,-44.798,-30.368)
O4': (111.330,-45.253,-29.309)
C5': (113.622,-44.752,-28.949)
P: (114.042,-42.379,-28.012)
O2: (107.952,-45.100,-30.761)
C4': (112.661,-45.520,-29.790)
C2': (111.488,-44.204,-31.383)
O2': (110.913,-44.150,-32.665)
N1: (109.553,-43.843,-29.826)
N3: (107.245,-43.255,-29.613)
N4: (106.745,-41.387,-28.405)
C6: (109.949,-42.772,-29.076)
C5: (109.027,-41.929,-28.606)
O3': (112.423,-46.312,-32.040)
OP1: (112.834,-48.729,-32.396)
OP2: (114.367,-47.359,-30.893)
C3': (116.179,-46.654,-35.505)
C1': (115.745,-44.434,-36.045)
C5': (113.780,-47.053,-34.688)
O6: (117.893,-40.973,-31.597)
O4': (114.503,-45.057,-35.857)
C8: (115.415,-43.808,-33.626)
C2: (118.792,-41.523,-35.020)
C6: (117.842,-41.453,-32.751)
C5: (116.949,-42.405,-33.297)
C4: (117.076,-42.792,-34.610)
P: (113.531,-47.458,-32.123)
C4': (114.693,-46.492,-35.747)
C2': (116.745,-45.540,-36.331)
O2': (116.638,-45.882,-37.693)
N1: (118.747,-41.067,-33.728)
N2: (119.759,-41.016,-35.782)
N3: (117.965,-42.401,-35.538)
N7: (115.898,-43.058,-32.690)
N9: (116.079,-43.699,-34.812)
O5': (114.368,-47.018,-33.400)
O3': (116.653,-47.909,-35.915)
OP2: (114.367,-47.359,-30.893)
C3': (116.179,-46.654,-35.505)
C1': (115.745,-44.434,-36.045)
C5': (113.780,-47.053,-34.688)
O6: (117.893,-40.973,-31.597)
O4': (114.503,-45.057,-35.857)
C8: (115.415,-43.808,-33.626)
C2: (118.792,-41.523,-35.020)
C6: (117.842,-41.453,-32.751)
C5: (116.949,-42.405,-33.297)
C4: (117.076,-42.792,-34.610)
P: (113.531,-47.458,-32.123)
C4': (114.693,-46.492,-35.747)
C2': (116.745,-45.540,-36.331)
O2': (116.638,-45.882,-37.693)
N1: (118.747,-41.067,-33.728)
N2: (119.759,-41.016,-35.782)
N3: (117.965,-42.401,-35.538)
N7: (115.898,-43.058,-32.690)
N9: (116.079,-43.699,-34.812)
O5': (114.368,-47.018,-33.400)
O3': (116.653,-47.909,-35.915)
Image (generated by PyMOL):