Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2088:A2089
Extra
PDB:
ATOM 1 O3' U A2087 114.371 -42.271 -26.389 1.00 28.61 O
ATOM 2 P C A2088 114.492 -42.103 -27.973 1.00 40.20 P
ATOM 3 OP1 C A2088 115.910 -42.386 -28.336 1.00 34.36 O
ATOM 4 OP2 C A2088 113.906 -40.780 -28.318 1.00 39.78 O
ATOM 5 O5' C A2088 113.560 -43.251 -28.528 1.00 30.30 O
ATOM 6 C5' C A2088 114.049 -44.561 -28.710 1.00 27.47 C
ATOM 7 C4' C A2088 113.131 -45.352 -29.588 1.00 24.28 C
ATOM 8 O4' C A2088 111.765 -45.114 -29.161 1.00 28.94 O
ATOM 9 C3' C A2088 113.180 -44.980 -31.062 1.00 24.17 C
ATOM 10 O3' C A2088 112.866 -46.116 -31.828 1.00 24.04 O
ATOM 11 C2' C A2088 112.035 -43.998 -31.192 1.00 33.42 C
ATOM 12 O2' C A2088 111.513 -43.878 -32.502 1.00 33.71 O
ATOM 13 C1' C A2088 111.018 -44.614 -30.251 1.00 30.46 C
ATOM 14 N1 C A2088 110.032 -43.662 -29.760 1.00 28.93 N
ATOM 15 C2 C A2088 108.682 -43.918 -30.004 1.00 38.21 C
ATOM 16 O2 C A2088 108.442 -44.986 -30.616 1.00 33.55 O
ATOM 17 N3 C A2088 107.735 -43.011 -29.569 1.00 36.18 N
ATOM 18 C4 C A2088 108.171 -41.908 -28.932 1.00 36.35 C
ATOM 19 N4 C A2088 107.332 -40.991 -28.479 1.00 30.80 N
ATOM 20 C5 C A2088 109.552 -41.658 -28.690 1.00 36.55 C
ATOM 21 C6 C A2088 110.445 -42.544 -29.126 1.00 30.51 C
ATOM 22 P G A2089 113.946 -47.241 -32.074 1.00 37.09 P
ATOM 23 OP1 G A2089 113.201 -48.472 -32.432 1.00 37.69 O
ATOM 24 OP2 G A2089 114.850 -47.268 -30.878 1.00 33.28 O
ATOM 25 O5' G A2089 114.736 -46.685 -33.345 1.00 31.45 O
TER
ATOM 1 O3' C B2088 112.866 -46.116 -31.828 1.00 24.04 O
ATOM 2 P G B2089 113.946 -47.241 -32.074 1.00 37.09 P
ATOM 3 OP1 G B2089 113.201 -48.472 -32.432 1.00 37.69 O
ATOM 4 OP2 G B2089 114.850 -47.268 -30.878 1.00 33.28 O
ATOM 5 O5' G B2089 114.736 -46.685 -33.345 1.00 31.45 O
ATOM 6 C5' G B2089 114.404 -47.104 -34.654 1.00 27.17 C
ATOM 7 C4' G B2089 115.211 -46.374 -35.694 1.00 32.30 C
ATOM 8 O4' G B2089 114.951 -44.951 -35.607 1.00 39.69 O
ATOM 9 C3' G B2089 116.723 -46.483 -35.562 1.00 30.92 C
ATOM 10 O3' G B2089 117.247 -47.669 -36.123 1.00 30.50 O
ATOM 11 C2' G B2089 117.206 -45.245 -36.271 1.00 36.03 C
ATOM 12 O2' G B2089 117.130 -45.444 -37.666 1.00 43.59 O
ATOM 13 C1' G B2089 116.140 -44.233 -35.874 1.00 37.14 C
ATOM 14 N9 G B2089 116.515 -43.487 -34.665 1.00 32.36 N
ATOM 15 C8 G B2089 115.858 -43.595 -33.472 1.00 33.76 C
ATOM 16 N7 G B2089 116.346 -42.835 -32.552 1.00 34.09 N
ATOM 17 C5 G B2089 117.385 -42.176 -33.182 1.00 31.92 C
ATOM 18 C6 G B2089 118.273 -41.222 -32.635 1.00 34.94 C
ATOM 19 O6 G B2089 118.292 -40.772 -31.470 1.00 39.49 O
ATOM 20 N1 G B2089 119.177 -40.801 -33.607 1.00 32.83 N
ATOM 21 C2 G B2089 119.218 -41.259 -34.901 1.00 32.73 C
ATOM 22 N2 G B2089 120.180 -40.736 -35.641 1.00 32.61 N
ATOM 23 N3 G B2089 118.396 -42.152 -35.429 1.00 32.99 N
ATOM 24 C4 G B2089 117.505 -42.561 -34.501 1.00 31.90 C
ATOM 25 P C B2090 118.515 -48.375 -35.436 1.00 42.52 P
ATOM 26 OP1 C B2090 118.761 -49.647 -36.166 1.00 32.07 O
ATOM 27 OP2 C B2090 118.261 -48.414 -33.948 1.00 32.28 O
ATOM 28 O5' C B2090 119.673 -47.354 -35.741 1.00 35.64 O
TER
ATOM 2 P C A2088 114.492 -42.103 -27.973 1.00 40.20 P
ATOM 3 OP1 C A2088 115.910 -42.386 -28.336 1.00 34.36 O
ATOM 4 OP2 C A2088 113.906 -40.780 -28.318 1.00 39.78 O
ATOM 5 O5' C A2088 113.560 -43.251 -28.528 1.00 30.30 O
ATOM 6 C5' C A2088 114.049 -44.561 -28.710 1.00 27.47 C
ATOM 7 C4' C A2088 113.131 -45.352 -29.588 1.00 24.28 C
ATOM 8 O4' C A2088 111.765 -45.114 -29.161 1.00 28.94 O
ATOM 9 C3' C A2088 113.180 -44.980 -31.062 1.00 24.17 C
ATOM 10 O3' C A2088 112.866 -46.116 -31.828 1.00 24.04 O
ATOM 11 C2' C A2088 112.035 -43.998 -31.192 1.00 33.42 C
ATOM 12 O2' C A2088 111.513 -43.878 -32.502 1.00 33.71 O
ATOM 13 C1' C A2088 111.018 -44.614 -30.251 1.00 30.46 C
ATOM 14 N1 C A2088 110.032 -43.662 -29.760 1.00 28.93 N
ATOM 15 C2 C A2088 108.682 -43.918 -30.004 1.00 38.21 C
ATOM 16 O2 C A2088 108.442 -44.986 -30.616 1.00 33.55 O
ATOM 17 N3 C A2088 107.735 -43.011 -29.569 1.00 36.18 N
ATOM 18 C4 C A2088 108.171 -41.908 -28.932 1.00 36.35 C
ATOM 19 N4 C A2088 107.332 -40.991 -28.479 1.00 30.80 N
ATOM 20 C5 C A2088 109.552 -41.658 -28.690 1.00 36.55 C
ATOM 21 C6 C A2088 110.445 -42.544 -29.126 1.00 30.51 C
ATOM 22 P G A2089 113.946 -47.241 -32.074 1.00 37.09 P
ATOM 23 OP1 G A2089 113.201 -48.472 -32.432 1.00 37.69 O
ATOM 24 OP2 G A2089 114.850 -47.268 -30.878 1.00 33.28 O
ATOM 25 O5' G A2089 114.736 -46.685 -33.345 1.00 31.45 O
TER
ATOM 1 O3' C B2088 112.866 -46.116 -31.828 1.00 24.04 O
ATOM 2 P G B2089 113.946 -47.241 -32.074 1.00 37.09 P
ATOM 3 OP1 G B2089 113.201 -48.472 -32.432 1.00 37.69 O
ATOM 4 OP2 G B2089 114.850 -47.268 -30.878 1.00 33.28 O
ATOM 5 O5' G B2089 114.736 -46.685 -33.345 1.00 31.45 O
ATOM 6 C5' G B2089 114.404 -47.104 -34.654 1.00 27.17 C
ATOM 7 C4' G B2089 115.211 -46.374 -35.694 1.00 32.30 C
ATOM 8 O4' G B2089 114.951 -44.951 -35.607 1.00 39.69 O
ATOM 9 C3' G B2089 116.723 -46.483 -35.562 1.00 30.92 C
ATOM 10 O3' G B2089 117.247 -47.669 -36.123 1.00 30.50 O
ATOM 11 C2' G B2089 117.206 -45.245 -36.271 1.00 36.03 C
ATOM 12 O2' G B2089 117.130 -45.444 -37.666 1.00 43.59 O
ATOM 13 C1' G B2089 116.140 -44.233 -35.874 1.00 37.14 C
ATOM 14 N9 G B2089 116.515 -43.487 -34.665 1.00 32.36 N
ATOM 15 C8 G B2089 115.858 -43.595 -33.472 1.00 33.76 C
ATOM 16 N7 G B2089 116.346 -42.835 -32.552 1.00 34.09 N
ATOM 17 C5 G B2089 117.385 -42.176 -33.182 1.00 31.92 C
ATOM 18 C6 G B2089 118.273 -41.222 -32.635 1.00 34.94 C
ATOM 19 O6 G B2089 118.292 -40.772 -31.470 1.00 39.49 O
ATOM 20 N1 G B2089 119.177 -40.801 -33.607 1.00 32.83 N
ATOM 21 C2 G B2089 119.218 -41.259 -34.901 1.00 32.73 C
ATOM 22 N2 G B2089 120.180 -40.736 -35.641 1.00 32.61 N
ATOM 23 N3 G B2089 118.396 -42.152 -35.429 1.00 32.99 N
ATOM 24 C4 G B2089 117.505 -42.561 -34.501 1.00 31.90 C
ATOM 25 P C B2090 118.515 -48.375 -35.436 1.00 42.52 P
ATOM 26 OP1 C B2090 118.761 -49.647 -36.166 1.00 32.07 O
ATOM 27 OP2 C B2090 118.261 -48.414 -33.948 1.00 32.28 O
ATOM 28 O5' C B2090 119.673 -47.354 -35.741 1.00 35.64 O
TER
Atoms:
C2: (108.682,-43.918,-30.004)
OP1: (115.910,-42.386,-28.336)
OP2: (113.906,-40.780,-28.318)
C4: (108.171,-41.908,-28.932)
O5': (113.560,-43.251,-28.528)
C3': (113.180,-44.980,-31.062)
C1': (111.018,-44.614,-30.251)
O4': (111.765,-45.114,-29.161)
C5': (114.049,-44.561,-28.710)
P: (114.492,-42.103,-27.973)
O2: (108.442,-44.986,-30.616)
C4': (113.131,-45.352,-29.588)
C2': (112.035,-43.998,-31.192)
O2': (111.513,-43.878,-32.502)
N1: (110.032,-43.662,-29.760)
N3: (107.735,-43.011,-29.569)
N4: (107.332,-40.991,-28.479)
C6: (110.445,-42.544,-29.126)
C5: (109.552,-41.658,-28.690)
O3': (112.866,-46.116,-31.828)
OP1: (115.910,-42.386,-28.336)
OP2: (113.906,-40.780,-28.318)
C4: (108.171,-41.908,-28.932)
O5': (113.560,-43.251,-28.528)
C3': (113.180,-44.980,-31.062)
C1': (111.018,-44.614,-30.251)
O4': (111.765,-45.114,-29.161)
C5': (114.049,-44.561,-28.710)
P: (114.492,-42.103,-27.973)
O2: (108.442,-44.986,-30.616)
C4': (113.131,-45.352,-29.588)
C2': (112.035,-43.998,-31.192)
O2': (111.513,-43.878,-32.502)
N1: (110.032,-43.662,-29.760)
N3: (107.735,-43.011,-29.569)
N4: (107.332,-40.991,-28.479)
C6: (110.445,-42.544,-29.126)
C5: (109.552,-41.658,-28.690)
O3': (112.866,-46.116,-31.828)
OP1: (113.201,-48.472,-32.432)
OP2: (114.850,-47.268,-30.878)
C3': (116.723,-46.483,-35.562)
C1': (116.140,-44.233,-35.874)
C5': (114.404,-47.104,-34.654)
O6: (118.292,-40.772,-31.470)
O4': (114.951,-44.951,-35.607)
C8: (115.858,-43.595,-33.472)
C2: (119.218,-41.259,-34.901)
C6: (118.273,-41.222,-32.635)
C5: (117.385,-42.176,-33.182)
C4: (117.505,-42.561,-34.501)
P: (113.946,-47.241,-32.074)
C4': (115.211,-46.374,-35.694)
C2': (117.206,-45.245,-36.271)
O2': (117.130,-45.444,-37.666)
N1: (119.177,-40.801,-33.607)
N2: (120.180,-40.736,-35.641)
N3: (118.396,-42.152,-35.429)
N7: (116.346,-42.835,-32.552)
N9: (116.515,-43.487,-34.665)
O5': (114.736,-46.685,-33.345)
O3': (117.247,-47.669,-36.123)
OP2: (114.850,-47.268,-30.878)
C3': (116.723,-46.483,-35.562)
C1': (116.140,-44.233,-35.874)
C5': (114.404,-47.104,-34.654)
O6: (118.292,-40.772,-31.470)
O4': (114.951,-44.951,-35.607)
C8: (115.858,-43.595,-33.472)
C2: (119.218,-41.259,-34.901)
C6: (118.273,-41.222,-32.635)
C5: (117.385,-42.176,-33.182)
C4: (117.505,-42.561,-34.501)
P: (113.946,-47.241,-32.074)
C4': (115.211,-46.374,-35.694)
C2': (117.206,-45.245,-36.271)
O2': (117.130,-45.444,-37.666)
N1: (119.177,-40.801,-33.607)
N2: (120.180,-40.736,-35.641)
N3: (118.396,-42.152,-35.429)
N7: (116.346,-42.835,-32.552)
N9: (116.515,-43.487,-34.665)
O5': (114.736,-46.685,-33.345)
O3': (117.247,-47.669,-36.123)
Image (generated by PyMOL):