ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A316:A317

Extra

PDB:
ATOM 1 O3' A A 315 15.218 126.413 20.889 1.00 54.30 O
ATOM 2 P U A 316 14.781 125.803 19.478 1.00 52.57 P
ATOM 3 OP1 U A 316 14.857 126.872 18.447 1.00 52.32 O
ATOM 4 OP2 U A 316 13.504 125.074 19.689 1.00 51.38 O
ATOM 5 O5' U A 316 15.928 124.756 19.180 1.00 52.35 O
ATOM 6 C5' U A 316 16.153 123.675 20.071 1.00 54.11 C
ATOM 7 C4' U A 316 17.622 123.545 20.361 1.00 56.73 C
ATOM 8 O4' U A 316 18.330 123.108 19.166 1.00 57.21 O
ATOM 9 C3' U A 316 18.330 124.810 20.841 1.00 57.02 C
ATOM 10 O3' U A 316 19.306 124.459 21.809 1.00 55.46 O
ATOM 11 C2' U A 316 19.075 125.287 19.601 1.00 57.54 C
ATOM 12 O2' U A 316 20.246 125.979 19.985 1.00 58.41 O
ATOM 13 C1' U A 316 19.437 123.960 18.933 1.00 58.51 C
ATOM 14 N1 U A 316 19.665 124.041 17.479 1.00 60.64 N
ATOM 15 C2 U A 316 20.793 123.409 16.947 1.00 61.97 C
ATOM 16 O2 U A 316 21.598 122.784 17.625 1.00 62.42 O
ATOM 17 N3 U A 316 20.935 123.534 15.586 1.00 62.43 N
ATOM 18 C4 U A 316 20.092 124.203 14.716 1.00 63.60 C
ATOM 19 O4 U A 316 20.351 124.216 13.507 1.00 64.39 O
ATOM 20 C5 U A 316 18.957 124.820 15.338 1.00 63.54 C
ATOM 21 C6 U A 316 18.787 124.720 16.662 1.00 62.56 C
ATOM 22 P A A 317 18.878 124.290 23.342 1.00 53.34 P
ATOM 23 OP1 A A 317 19.778 123.227 23.868 1.00 49.01 O
ATOM 24 OP2 A A 317 17.408 124.081 23.346 1.00 54.08 O
ATOM 25 O5' A A 317 19.158 125.721 24.005 1.00 52.19 O
TER

ATOM 1 O3' U B 316 19.306 124.459 21.809 1.00 55.46 O
ATOM 2 P A B 317 18.878 124.290 23.342 1.00 53.34 P
ATOM 3 OP1 A B 317 19.778 123.227 23.868 1.00 49.01 O
ATOM 4 OP2 A B 317 17.408 124.081 23.346 1.00 54.08 O
ATOM 5 O5' A B 317 19.158 125.721 24.005 1.00 52.19 O
ATOM 6 C5' A B 317 20.345 125.988 24.781 1.00 51.16 C
ATOM 7 C4' A B 317 20.273 127.375 25.392 1.00 50.65 C
ATOM 8 O4' A B 317 20.201 128.369 24.324 1.00 51.32 O
ATOM 9 C3' A B 317 19.096 127.669 26.323 1.00 49.70 C
ATOM 10 O3' A B 317 19.497 128.622 27.344 1.00 48.73 O
ATOM 11 C2' A B 317 18.106 128.320 25.352 1.00 49.97 C
ATOM 12 O2' A B 317 17.106 129.122 25.937 1.00 49.04 O
ATOM 13 C1' A B 317 19.049 129.161 24.494 1.00 51.00 C
ATOM 14 N9 A B 317 18.548 129.561 23.176 1.00 53.24 N
ATOM 15 C8 A B 317 17.909 128.806 22.216 1.00 54.08 C
ATOM 16 N7 A B 317 17.545 129.493 21.158 1.00 55.26 N
ATOM 17 C5 A B 317 17.983 130.782 21.430 1.00 55.47 C
ATOM 18 C6 A B 317 17.903 131.990 20.700 1.00 55.86 C
ATOM 19 N6 A B 317 17.313 132.106 19.508 1.00 54.84 N
ATOM 20 N1 A B 317 18.457 133.094 21.251 1.00 56.39 N
ATOM 21 C2 A B 317 19.045 132.988 22.449 1.00 56.51 C
ATOM 22 N3 A B 317 19.176 131.919 23.233 1.00 56.10 N
ATOM 23 C4 A B 317 18.618 130.835 22.661 1.00 54.99 C
ATOM 24 P C B 318 20.359 128.149 28.640 1.00 45.93 P
ATOM 25 OP1 C B 318 20.417 129.346 29.511 1.00 45.55 O
ATOM 26 OP2 C B 318 21.629 127.457 28.245 1.00 43.36 O
ATOM 27 O5' C B 318 19.432 127.119 29.422 1.00 47.45 O
TER

Atoms:
C4: (20.092,124.203,14.716)
N3: (20.935,123.534,15.586)
OP1: (14.857,126.872,18.447)
OP2: (13.504,125.074,19.689)
C2: (20.793,123.409,16.947)
C1': (19.437,123.960,18.933)
C3': (18.330,124.810,20.841)
O5': (15.928,124.756,19.180)
O4': (18.330,123.108,19.166)
C5': (16.153,123.675,20.071)
P: (14.781,125.803,19.478)
C4': (17.622,123.545,20.361)
C2': (19.075,125.287,19.601)
O2': (20.246,125.979,19.985)
N1: (19.665,124.041,17.479)
O4: (20.351,124.216,13.507)
O2: (21.598,122.784,17.625)
C6: (18.787,124.720,16.662)
C5: (18.957,124.820,15.338)
O3': (19.306,124.459,21.809)
OP1: (19.778,123.227,23.868)
OP2: (17.408,124.081,23.346)
C3': (19.096,127.669,26.323)
C1': (19.049,129.161,24.494)
C5': (20.345,125.988,24.781)
O4': (20.201,128.369,24.324)
C8: (17.909,128.806,22.216)
O2': (17.106,129.122,25.937)
C6: (17.903,131.990,20.700)
C5: (17.983,130.782,21.430)
C4: (18.618,130.835,22.661)
P: (18.878,124.290,23.342)
C4': (20.273,127.375,25.392)
C2': (18.106,128.320,25.352)
C2: (19.045,132.988,22.449)
N1: (18.457,133.094,21.251)
N3: (19.176,131.919,23.233)
N6: (17.313,132.106,19.508)
N7: (17.545,129.493,21.158)
N9: (18.548,129.561,23.176)
O5': (19.158,125.721,24.005)
O3': (19.497,128.622,27.344)
Image (generated by PyMOL):
PyMOL image
show in jmol