ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01007:01042

Extra

PDB:
ATOM 1 O3' U A1006 46.217 95.333 104.689 1.00 36.39 O
ATOM 2 P G A1007 46.754 94.184 105.678 1.00 39.80 P
ATOM 3 OP1 G A1007 47.077 94.877 106.959 1.00 41.43 O
ATOM 4 OP2 G A1007 47.778 93.353 105.016 1.00 36.69 O
ATOM 5 O5' G A1007 45.478 93.274 105.927 1.00 37.42 O
ATOM 6 C5' G A1007 44.346 93.800 106.618 1.00 34.47 C
ATOM 7 C4' G A1007 43.207 92.828 106.554 1.00 35.79 C
ATOM 8 O4' G A1007 42.803 92.623 105.175 1.00 36.64 O
ATOM 9 C3' G A1007 43.516 91.425 107.028 1.00 35.42 C
ATOM 10 O3' G A1007 43.539 91.351 108.439 1.00 35.52 O
ATOM 11 C2' G A1007 42.376 90.639 106.397 1.00 35.75 C
ATOM 12 O2' G A1007 41.149 90.835 107.067 1.00 39.07 O
ATOM 13 C1' G A1007 42.290 91.308 105.025 1.00 35.80 C
ATOM 14 N9 G A1007 43.106 90.611 104.040 1.00 35.23 N
ATOM 15 C8 G A1007 44.363 90.954 103.606 1.00 34.03 C
ATOM 16 N7 G A1007 44.842 90.121 102.725 1.00 34.87 N
ATOM 17 C5 G A1007 43.841 89.176 102.565 1.00 33.10 C
ATOM 18 C6 G A1007 43.790 88.027 101.744 1.00 33.99 C
ATOM 19 O6 G A1007 44.641 87.611 100.944 1.00 33.92 O
ATOM 20 N1 G A1007 42.597 87.334 101.913 1.00 33.39 N
ATOM 21 C2 G A1007 41.575 87.709 102.753 1.00 33.80 C
ATOM 22 N2 G A1007 40.501 86.908 102.784 1.00 32.71 N
ATOM 23 N3 G A1007 41.606 88.788 103.510 1.00 35.01 N
ATOM 24 C4 G A1007 42.763 89.466 103.371 1.00 34.52 C
ATOM 25 P C A1008 44.592 90.379 109.160 1.00 37.02 P
ATOM 26 OP1 C A1008 44.522 90.702 110.601 1.00 37.82 O
ATOM 27 OP2 C A1008 45.892 90.448 108.450 1.00 39.12 O
ATOM 28 O5' C A1008 44.015 88.922 108.907 1.00 36.06 O
TER

ATOM 1 O3' A B1041 38.227 94.958 103.344 1.00 41.80 O
ATOM 2 P C B1042 39.102 94.105 104.394 1.00 43.26 P
ATOM 3 OP1 C B1042 40.496 94.653 104.424 1.00 42.85 O
ATOM 4 OP2 C B1042 38.893 92.674 104.082 1.00 45.15 O
ATOM 5 O5' C B1042 38.433 94.383 105.812 1.00 40.93 O
ATOM 6 C5' C B1042 38.931 93.702 106.989 1.00 38.49 C
ATOM 7 C4' C B1042 37.956 93.828 108.128 1.00 36.78 C
ATOM 8 O4' C B1042 37.958 95.182 108.653 1.00 34.82 O
ATOM 9 C3' C B1042 36.503 93.559 107.783 1.00 35.08 C
ATOM 10 O3' C B1042 36.246 92.164 107.731 1.00 37.99 O
ATOM 11 C2' C B1042 35.787 94.277 108.919 1.00 35.04 C
ATOM 12 O2' C B1042 35.857 93.558 110.137 1.00 34.42 O
ATOM 13 C1' C B1042 36.644 95.540 109.051 1.00 33.33 C
ATOM 14 N1 C B1042 36.174 96.646 108.186 1.00 34.20 N
ATOM 15 C2 C B1042 34.959 97.275 108.498 1.00 32.54 C
ATOM 16 O2 C B1042 34.315 96.880 109.484 1.00 32.86 O
ATOM 17 N3 C B1042 34.520 98.290 107.717 1.00 30.66 N
ATOM 18 C4 C B1042 35.239 98.682 106.658 1.00 32.17 C
ATOM 19 N4 C B1042 34.766 99.695 105.917 1.00 29.49 N
ATOM 20 C5 C B1042 36.472 98.058 106.313 1.00 32.59 C
ATOM 21 C6 C B1042 36.899 97.054 107.096 1.00 33.36 C
ATOM 22 P C B1043 34.938 91.617 106.970 1.00 40.36 P
ATOM 23 OP1 C B1043 34.952 90.143 107.119 1.00 42.20 O
ATOM 24 OP2 C B1043 34.846 92.213 105.612 1.00 42.49 O
ATOM 25 O5' C B1043 33.727 92.194 107.821 1.00 37.99 O
TER

Atoms:
OP1: (47.077,94.877,106.959)
OP2: (47.778,93.353,105.016)
C3': (43.516,91.425,107.028)
C1': (42.290,91.308,105.025)
C5': (44.346,93.800,106.618)
O6: (44.641,87.611,100.944)
O4': (42.803,92.623,105.175)
C8: (44.363,90.954,103.606)
C2: (41.575,87.709,102.753)
C6: (43.790,88.027,101.744)
C5: (43.841,89.176,102.565)
C4: (42.763,89.466,103.371)
P: (46.754,94.184,105.678)
C4': (43.207,92.828,106.554)
C2': (42.376,90.639,106.397)
O2': (41.149,90.835,107.067)
N1: (42.597,87.334,101.913)
N2: (40.501,86.908,102.784)
N3: (41.606,88.788,103.510)
N7: (44.842,90.121,102.725)
N9: (43.106,90.611,104.040)
O5': (45.478,93.274,105.927)
O3': (43.539,91.351,108.439)
C2: (34.959,97.275,108.498)
OP1: (40.496,94.653,104.424)
OP2: (38.893,92.674,104.082)
C4: (35.239,98.682,106.658)
O5': (38.433,94.383,105.812)
C3': (36.503,93.559,107.783)
C1': (36.644,95.540,109.051)
O4': (37.958,95.182,108.653)
C5': (38.931,93.702,106.989)
P: (39.102,94.105,104.394)
O2: (34.315,96.880,109.484)
C4': (37.956,93.828,108.128)
C2': (35.787,94.277,108.919)
O2': (35.857,93.558,110.137)
N1: (36.174,96.646,108.186)
N3: (34.520,98.290,107.717)
N4: (34.766,99.695,105.917)
C6: (36.899,97.054,107.096)
C5: (36.472,98.058,106.313)
O3': (36.246,92.164,107.731)
Image (generated by PyMOL):
PyMOL image
show in jmol