Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A316:A317
Extra
PDB:
ATOM 1 O3' A A 315 15.084 126.644 20.921 1.00 55.60 O
ATOM 2 P U A 316 14.635 126.043 19.503 1.00 52.50 P
ATOM 3 OP1 U A 316 14.700 127.138 18.512 1.00 54.68 O
ATOM 4 OP2 U A 316 13.369 125.296 19.689 1.00 53.62 O
ATOM 5 O5' U A 316 15.771 124.990 19.176 1.00 53.13 O
ATOM 6 C5' U A 316 16.015 123.905 20.069 1.00 53.63 C
ATOM 7 C4' U A 316 17.483 123.810 20.379 1.00 55.57 C
ATOM 8 O4' U A 316 18.213 123.399 19.195 1.00 55.98 O
ATOM 9 C3' U A 316 18.152 125.091 20.860 1.00 56.10 C
ATOM 10 O3' U A 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 11 C2' U A 316 18.859 125.607 19.618 1.00 56.66 C
ATOM 12 O2' U A 316 19.974 126.377 20.030 1.00 56.66 O
ATOM 13 C1' U A 316 19.287 124.288 18.964 1.00 57.32 C
ATOM 14 N1 U A 316 19.520 124.333 17.513 1.00 59.06 N
ATOM 15 C2 U A 316 20.660 123.711 16.989 1.00 60.41 C
ATOM 16 O2 U A 316 21.471 123.098 17.668 1.00 60.97 O
ATOM 17 N3 U A 316 20.798 123.823 15.629 1.00 61.06 N
ATOM 18 C4 U A 316 19.937 124.458 14.753 1.00 62.28 C
ATOM 19 O4 U A 316 20.212 124.495 13.551 1.00 63.41 O
ATOM 20 C5 U A 316 18.789 125.048 15.365 1.00 62.55 C
ATOM 21 C6 U A 316 18.625 124.970 16.689 1.00 61.00 C
ATOM 22 P A A 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 23 OP1 A A 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 24 OP2 A A 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 25 O5' A A 317 19.117 125.993 23.968 1.00 53.97 O
TER
ATOM 1 O3' U B 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 2 P A B 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 3 OP1 A B 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 4 OP2 A B 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 5 O5' A B 317 19.117 125.993 23.968 1.00 53.97 O
ATOM 6 C5' A B 317 20.279 126.232 24.781 1.00 53.71 C
ATOM 7 C4' A B 317 20.237 127.633 25.347 1.00 53.88 C
ATOM 8 O4' A B 317 20.080 128.575 24.242 1.00 53.96 O
ATOM 9 C3' A B 317 19.088 127.915 26.316 1.00 54.17 C
ATOM 10 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 11 C2' A B 317 18.051 128.528 25.374 1.00 54.17 C
ATOM 12 O2' A B 317 17.059 129.320 25.988 1.00 54.58 O
ATOM 13 C1' A B 317 18.947 129.377 24.476 1.00 55.02 C
ATOM 14 N9 A B 317 18.399 129.828 23.191 1.00 57.19 N
ATOM 15 C8 A B 317 17.679 129.115 22.256 1.00 58.13 C
ATOM 16 N7 A B 317 17.350 129.814 21.196 1.00 58.34 N
ATOM 17 C5 A B 317 17.886 131.069 21.444 1.00 57.56 C
ATOM 18 C6 A B 317 17.899 132.257 20.692 1.00 57.28 C
ATOM 19 N6 A B 317 17.360 132.385 19.478 1.00 55.55 N
ATOM 20 N1 A B 317 18.509 133.332 21.234 1.00 57.71 N
ATOM 21 C2 A B 317 19.082 133.214 22.440 1.00 58.25 C
ATOM 22 N3 A B 317 19.151 132.152 23.235 1.00 57.88 N
ATOM 23 C4 A B 317 18.527 131.097 22.673 1.00 57.86 C
ATOM 24 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 25 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 26 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 27 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
TER
ATOM 2 P U A 316 14.635 126.043 19.503 1.00 52.50 P
ATOM 3 OP1 U A 316 14.700 127.138 18.512 1.00 54.68 O
ATOM 4 OP2 U A 316 13.369 125.296 19.689 1.00 53.62 O
ATOM 5 O5' U A 316 15.771 124.990 19.176 1.00 53.13 O
ATOM 6 C5' U A 316 16.015 123.905 20.069 1.00 53.63 C
ATOM 7 C4' U A 316 17.483 123.810 20.379 1.00 55.57 C
ATOM 8 O4' U A 316 18.213 123.399 19.195 1.00 55.98 O
ATOM 9 C3' U A 316 18.152 125.091 20.860 1.00 56.10 C
ATOM 10 O3' U A 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 11 C2' U A 316 18.859 125.607 19.618 1.00 56.66 C
ATOM 12 O2' U A 316 19.974 126.377 20.030 1.00 56.66 O
ATOM 13 C1' U A 316 19.287 124.288 18.964 1.00 57.32 C
ATOM 14 N1 U A 316 19.520 124.333 17.513 1.00 59.06 N
ATOM 15 C2 U A 316 20.660 123.711 16.989 1.00 60.41 C
ATOM 16 O2 U A 316 21.471 123.098 17.668 1.00 60.97 O
ATOM 17 N3 U A 316 20.798 123.823 15.629 1.00 61.06 N
ATOM 18 C4 U A 316 19.937 124.458 14.753 1.00 62.28 C
ATOM 19 O4 U A 316 20.212 124.495 13.551 1.00 63.41 O
ATOM 20 C5 U A 316 18.789 125.048 15.365 1.00 62.55 C
ATOM 21 C6 U A 316 18.625 124.970 16.689 1.00 61.00 C
ATOM 22 P A A 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 23 OP1 A A 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 24 OP2 A A 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 25 O5' A A 317 19.117 125.993 23.968 1.00 53.97 O
TER
ATOM 1 O3' U B 316 19.173 124.741 21.770 1.00 55.24 O
ATOM 2 P A B 317 18.821 124.563 23.316 1.00 55.02 P
ATOM 3 OP1 A B 317 19.759 123.548 23.853 1.00 51.84 O
ATOM 4 OP2 A B 317 17.358 124.317 23.368 1.00 54.24 O
ATOM 5 O5' A B 317 19.117 125.993 23.968 1.00 53.97 O
ATOM 6 C5' A B 317 20.279 126.232 24.781 1.00 53.71 C
ATOM 7 C4' A B 317 20.237 127.633 25.347 1.00 53.88 C
ATOM 8 O4' A B 317 20.080 128.575 24.242 1.00 53.96 O
ATOM 9 C3' A B 317 19.088 127.915 26.316 1.00 54.17 C
ATOM 10 O3' A B 317 19.496 128.886 27.313 1.00 55.06 O
ATOM 11 C2' A B 317 18.051 128.528 25.374 1.00 54.17 C
ATOM 12 O2' A B 317 17.059 129.320 25.988 1.00 54.58 O
ATOM 13 C1' A B 317 18.947 129.377 24.476 1.00 55.02 C
ATOM 14 N9 A B 317 18.399 129.828 23.191 1.00 57.19 N
ATOM 15 C8 A B 317 17.679 129.115 22.256 1.00 58.13 C
ATOM 16 N7 A B 317 17.350 129.814 21.196 1.00 58.34 N
ATOM 17 C5 A B 317 17.886 131.069 21.444 1.00 57.56 C
ATOM 18 C6 A B 317 17.899 132.257 20.692 1.00 57.28 C
ATOM 19 N6 A B 317 17.360 132.385 19.478 1.00 55.55 N
ATOM 20 N1 A B 317 18.509 133.332 21.234 1.00 57.71 N
ATOM 21 C2 A B 317 19.082 133.214 22.440 1.00 58.25 C
ATOM 22 N3 A B 317 19.151 132.152 23.235 1.00 57.88 N
ATOM 23 C4 A B 317 18.527 131.097 22.673 1.00 57.86 C
ATOM 24 P C B 318 20.319 128.428 28.636 1.00 53.87 P
ATOM 25 OP1 C B 318 20.370 129.631 29.493 1.00 54.03 O
ATOM 26 OP2 C B 318 21.589 127.721 28.262 1.00 51.34 O
ATOM 27 O5' C B 318 19.373 127.400 29.407 1.00 54.11 O
TER
Atoms:
C4: (19.937,124.458,14.753)
N3: (20.798,123.823,15.629)
OP1: (14.700,127.138,18.512)
OP2: (13.369,125.296,19.689)
C2: (20.660,123.711,16.989)
C1': (19.287,124.288,18.964)
C3': (18.152,125.091,20.860)
O5': (15.771,124.990,19.176)
O4': (18.213,123.399,19.195)
C5': (16.015,123.905,20.069)
P: (14.635,126.043,19.503)
C4': (17.483,123.810,20.379)
C2': (18.859,125.607,19.618)
O2': (19.974,126.377,20.030)
N1: (19.520,124.333,17.513)
O4: (20.212,124.495,13.551)
O2: (21.471,123.098,17.668)
C6: (18.625,124.970,16.689)
C5: (18.789,125.048,15.365)
O3': (19.173,124.741,21.770)
N3: (20.798,123.823,15.629)
OP1: (14.700,127.138,18.512)
OP2: (13.369,125.296,19.689)
C2: (20.660,123.711,16.989)
C1': (19.287,124.288,18.964)
C3': (18.152,125.091,20.860)
O5': (15.771,124.990,19.176)
O4': (18.213,123.399,19.195)
C5': (16.015,123.905,20.069)
P: (14.635,126.043,19.503)
C4': (17.483,123.810,20.379)
C2': (18.859,125.607,19.618)
O2': (19.974,126.377,20.030)
N1: (19.520,124.333,17.513)
O4: (20.212,124.495,13.551)
O2: (21.471,123.098,17.668)
C6: (18.625,124.970,16.689)
C5: (18.789,125.048,15.365)
O3': (19.173,124.741,21.770)
OP1: (19.759,123.548,23.853)
OP2: (17.358,124.317,23.368)
C3': (19.088,127.915,26.316)
C1': (18.947,129.377,24.476)
C5': (20.279,126.232,24.781)
O4': (20.080,128.575,24.242)
C8: (17.679,129.115,22.256)
O2': (17.059,129.320,25.988)
C6: (17.899,132.257,20.692)
C5: (17.886,131.069,21.444)
C4: (18.527,131.097,22.673)
P: (18.821,124.563,23.316)
C4': (20.237,127.633,25.347)
C2': (18.051,128.528,25.374)
C2: (19.082,133.214,22.440)
N1: (18.509,133.332,21.234)
N3: (19.151,132.152,23.235)
N6: (17.360,132.385,19.478)
N7: (17.350,129.814,21.196)
N9: (18.399,129.828,23.191)
O5': (19.117,125.993,23.968)
O3': (19.496,128.886,27.313)
OP2: (17.358,124.317,23.368)
C3': (19.088,127.915,26.316)
C1': (18.947,129.377,24.476)
C5': (20.279,126.232,24.781)
O4': (20.080,128.575,24.242)
C8: (17.679,129.115,22.256)
O2': (17.059,129.320,25.988)
C6: (17.899,132.257,20.692)
C5: (17.886,131.069,21.444)
C4: (18.527,131.097,22.673)
P: (18.821,124.563,23.316)
C4': (20.237,127.633,25.347)
C2': (18.051,128.528,25.374)
C2: (19.082,133.214,22.440)
N1: (18.509,133.332,21.234)
N3: (19.151,132.152,23.235)
N6: (17.360,132.385,19.478)
N7: (17.350,129.814,21.196)
N9: (18.399,129.828,23.191)
O5': (19.117,125.993,23.968)
O3': (19.496,128.886,27.313)
Image (generated by PyMOL):