ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01007:01042

Extra

PDB:
ATOM 1 O3' U A1006 46.167 95.167 104.556 1.00 40.56 O
ATOM 2 P G A1007 46.714 94.003 105.520 1.00 43.07 P
ATOM 3 OP1 G A1007 47.072 94.678 106.798 1.00 46.55 O
ATOM 4 OP2 G A1007 47.723 93.167 104.830 1.00 41.73 O
ATOM 5 O5' G A1007 45.433 93.102 105.768 1.00 41.39 O
ATOM 6 C5' G A1007 44.289 93.640 106.433 1.00 39.52 C
ATOM 7 C4' G A1007 43.142 92.674 106.348 1.00 41.93 C
ATOM 8 O4' G A1007 42.765 92.465 104.961 1.00 42.42 O
ATOM 9 C3' G A1007 43.425 91.267 106.832 1.00 41.72 C
ATOM 10 O3' G A1007 43.422 91.190 108.247 1.00 41.14 O
ATOM 11 C2' G A1007 42.279 90.504 106.189 1.00 42.19 C
ATOM 12 O2' G A1007 41.049 90.753 106.839 1.00 44.50 O
ATOM 13 C1' G A1007 42.235 91.160 104.808 1.00 41.19 C
ATOM 14 N9 G A1007 43.049 90.442 103.833 1.00 39.63 N
ATOM 15 C8 G A1007 44.310 90.767 103.398 1.00 39.99 C
ATOM 16 N7 G A1007 44.783 89.922 102.519 1.00 39.75 N
ATOM 17 C5 G A1007 43.774 88.986 102.362 1.00 37.02 C
ATOM 18 C6 G A1007 43.711 87.837 101.541 1.00 38.44 C
ATOM 19 O6 G A1007 44.558 87.409 100.744 1.00 39.12 O
ATOM 20 N1 G A1007 42.507 87.157 101.706 1.00 37.59 N
ATOM 21 C2 G A1007 41.491 87.541 102.543 1.00 38.11 C
ATOM 22 N2 G A1007 40.410 86.756 102.562 1.00 38.74 N
ATOM 23 N3 G A1007 41.532 88.618 103.307 1.00 40.18 N
ATOM 24 C4 G A1007 42.697 89.288 103.169 1.00 39.90 C
ATOM 25 P C A1008 44.480 90.236 108.989 1.00 42.84 P
ATOM 26 OP1 C A1008 44.384 90.585 110.421 1.00 44.28 O
ATOM 27 OP2 C A1008 45.791 90.296 108.308 1.00 45.66 O
ATOM 28 O5' C A1008 43.915 88.769 108.755 1.00 42.53 O
TER

ATOM 1 O3' A B1041 37.995 94.804 103.127 1.00 50.02 O
ATOM 2 P C B1042 38.812 93.855 104.144 1.00 50.82 P
ATOM 3 OP1 C B1042 40.247 94.248 104.136 1.00 51.98 O
ATOM 4 OP2 C B1042 38.440 92.456 103.833 1.00 53.98 O
ATOM 5 O5' C B1042 38.221 94.195 105.583 1.00 49.21 O
ATOM 6 C5' C B1042 38.719 93.505 106.749 1.00 46.32 C
ATOM 7 C4' C B1042 37.765 93.658 107.905 1.00 43.58 C
ATOM 8 O4' C B1042 37.794 95.016 108.422 1.00 40.48 O
ATOM 9 C3' C B1042 36.305 93.395 107.587 1.00 42.34 C
ATOM 10 O3' C B1042 36.049 91.992 107.575 1.00 45.92 O
ATOM 11 C2' C B1042 35.612 94.140 108.722 1.00 42.31 C
ATOM 12 O2' C B1042 35.694 93.429 109.944 1.00 40.51 O
ATOM 13 C1' C B1042 36.489 95.394 108.834 1.00 40.20 C
ATOM 14 N1 C B1042 36.028 96.503 107.966 1.00 39.82 N
ATOM 15 C2 C B1042 34.850 97.183 108.303 1.00 38.30 C
ATOM 16 O2 C B1042 34.230 96.843 109.320 1.00 39.36 O
ATOM 17 N3 C B1042 34.416 98.189 107.508 1.00 36.05 N
ATOM 18 C4 C B1042 35.103 98.520 106.410 1.00 38.35 C
ATOM 19 N4 C B1042 34.630 99.520 105.646 1.00 35.45 N
ATOM 20 C5 C B1042 36.301 97.847 106.042 1.00 37.63 C
ATOM 21 C6 C B1042 36.728 96.858 106.842 1.00 38.31 C
ATOM 22 P C B1043 34.780 91.409 106.773 1.00 48.01 P
ATOM 23 OP1 C B1043 34.791 89.939 106.935 1.00 48.60 O
ATOM 24 OP2 C B1043 34.738 91.993 105.407 1.00 49.69 O
ATOM 25 O5' C B1043 33.534 91.960 107.589 1.00 44.02 O
TER

Atoms:
OP1: (47.072,94.678,106.798)
OP2: (47.723,93.167,104.830)
C3': (43.425,91.267,106.832)
C1': (42.235,91.160,104.808)
C5': (44.289,93.640,106.433)
O6: (44.558,87.409,100.744)
O4': (42.765,92.465,104.961)
C8: (44.310,90.767,103.398)
C2: (41.491,87.541,102.543)
C6: (43.711,87.837,101.541)
C5: (43.774,88.986,102.362)
C4: (42.697,89.288,103.169)
P: (46.714,94.003,105.520)
C4': (43.142,92.674,106.348)
C2': (42.279,90.504,106.189)
O2': (41.049,90.753,106.839)
N1: (42.507,87.157,101.706)
N2: (40.410,86.756,102.562)
N3: (41.532,88.618,103.307)
N7: (44.783,89.922,102.519)
N9: (43.049,90.442,103.833)
O5': (45.433,93.102,105.768)
O3': (43.422,91.190,108.247)
C2: (34.850,97.183,108.303)
OP1: (40.247,94.248,104.136)
OP2: (38.440,92.456,103.833)
C4: (35.103,98.520,106.410)
O5': (38.221,94.195,105.583)
C3': (36.305,93.395,107.587)
C1': (36.489,95.394,108.834)
O4': (37.794,95.016,108.422)
C5': (38.719,93.505,106.749)
P: (38.812,93.855,104.144)
O2: (34.230,96.843,109.320)
C4': (37.765,93.658,107.905)
C2': (35.612,94.140,108.722)
O2': (35.694,93.429,109.944)
N1: (36.028,96.503,107.966)
N3: (34.416,98.189,107.508)
N4: (34.630,99.520,105.646)
C6: (36.728,96.858,106.842)
C5: (36.301,97.847,106.042)
O3': (36.049,91.992,107.575)
Image (generated by PyMOL):
PyMOL image
show in jmol