ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A316:A317

Extra

PDB:
ATOM 1 O3' A A 315 14.760 126.629 20.624 1.00 42.37 O
ATOM 2 P U A 316 14.315 126.067 19.197 1.00 42.10 P
ATOM 3 OP1 U A 316 14.340 127.188 18.228 1.00 43.56 O
ATOM 4 OP2 U A 316 13.048 125.334 19.431 1.00 41.57 O
ATOM 5 O5' U A 316 15.482 125.046 18.837 1.00 42.39 O
ATOM 6 C5' U A 316 15.734 123.914 19.684 1.00 43.78 C
ATOM 7 C4' U A 316 17.204 123.804 20.015 1.00 44.54 C
ATOM 8 O4' U A 316 17.934 123.383 18.835 1.00 46.13 O
ATOM 9 C3' U A 316 17.905 125.056 20.532 1.00 45.21 C
ATOM 10 O3' U A 316 18.857 124.669 21.521 1.00 43.78 O
ATOM 11 C2' U A 316 18.602 125.584 19.277 1.00 45.51 C
ATOM 12 O2' U A 316 19.747 126.363 19.547 1.00 47.41 O
ATOM 13 C1' U A 316 18.991 124.281 18.580 1.00 45.98 C
ATOM 14 N1 U A 316 19.179 124.343 17.120 1.00 47.23 N
ATOM 15 C2 U A 316 20.338 123.790 16.595 1.00 48.35 C
ATOM 16 O2 U A 316 21.208 123.285 17.279 1.00 48.81 O
ATOM 17 N3 U A 316 20.439 123.845 15.228 1.00 49.53 N
ATOM 18 C4 U A 316 19.531 124.384 14.344 1.00 50.58 C
ATOM 19 O4 U A 316 19.777 124.349 13.136 1.00 52.94 O
ATOM 20 C5 U A 316 18.365 124.945 14.953 1.00 49.69 C
ATOM 21 C6 U A 316 18.231 124.910 16.288 1.00 48.75 C
ATOM 22 P A A 317 18.394 124.514 23.057 1.00 43.33 P
ATOM 23 OP1 A A 317 19.286 123.494 23.663 1.00 42.66 O
ATOM 24 OP2 A A 317 16.925 124.320 23.098 1.00 42.85 O
ATOM 25 O5' A A 317 18.682 125.941 23.710 1.00 41.75 O
TER

ATOM 1 O3' U B 316 18.857 124.669 21.521 1.00 43.78 O
ATOM 2 P A B 317 18.394 124.514 23.057 1.00 43.33 P
ATOM 3 OP1 A B 317 19.286 123.494 23.663 1.00 42.66 O
ATOM 4 OP2 A B 317 16.925 124.320 23.098 1.00 42.85 O
ATOM 5 O5' A B 317 18.682 125.941 23.710 1.00 41.75 O
ATOM 6 C5' A B 317 19.875 126.192 24.473 1.00 38.93 C
ATOM 7 C4' A B 317 19.837 127.583 25.064 1.00 38.60 C
ATOM 8 O4' A B 317 19.735 128.537 23.967 1.00 39.16 O
ATOM 9 C3' A B 317 18.688 127.909 26.024 1.00 38.86 C
ATOM 10 O3' A B 317 19.099 128.912 26.973 1.00 41.36 O
ATOM 11 C2' A B 317 17.696 128.610 25.099 1.00 38.95 C
ATOM 12 O2' A B 317 16.853 129.524 25.758 1.00 38.13 O
ATOM 13 C1' A B 317 18.642 129.397 24.198 1.00 39.71 C
ATOM 14 N9 A B 317 18.087 129.820 22.912 1.00 41.68 N
ATOM 15 C8 A B 317 17.350 129.088 22.014 1.00 42.71 C
ATOM 16 N7 A B 317 17.017 129.752 20.934 1.00 43.61 N
ATOM 17 C5 A B 317 17.568 131.009 21.132 1.00 44.32 C
ATOM 18 C6 A B 317 17.583 132.171 20.339 1.00 44.73 C
ATOM 19 N6 A B 317 17.006 132.258 19.141 1.00 45.07 N
ATOM 20 N1 A B 317 18.227 133.254 20.825 1.00 46.16 N
ATOM 21 C2 A B 317 18.812 133.168 22.026 1.00 45.09 C
ATOM 22 N3 A B 317 18.869 132.134 22.864 1.00 45.64 N
ATOM 23 C4 A B 317 18.223 131.069 22.350 1.00 43.99 C
ATOM 24 P C B 318 19.877 128.511 28.332 1.00 42.38 P
ATOM 25 OP1 C B 318 19.827 129.741 29.154 1.00 39.26 O
ATOM 26 OP2 C B 318 21.190 127.869 28.013 1.00 39.93 O
ATOM 27 O5' C B 318 18.956 127.443 29.066 1.00 41.49 O
TER

Atoms:
C4: (19.531,124.384,14.344)
N3: (20.439,123.845,15.228)
OP1: (14.340,127.188,18.228)
OP2: (13.048,125.334,19.431)
C2: (20.338,123.790,16.595)
C1': (18.991,124.281,18.580)
C3': (17.905,125.056,20.532)
O5': (15.482,125.046,18.837)
O4': (17.934,123.383,18.835)
C5': (15.734,123.914,19.684)
P: (14.315,126.067,19.197)
C4': (17.204,123.804,20.015)
C2': (18.602,125.584,19.277)
O2': (19.747,126.363,19.547)
N1: (19.179,124.343,17.120)
O4: (19.777,124.349,13.136)
O2: (21.208,123.285,17.279)
C6: (18.231,124.910,16.288)
C5: (18.365,124.945,14.953)
O3': (18.857,124.669,21.521)
OP1: (19.286,123.494,23.663)
OP2: (16.925,124.320,23.098)
C3': (18.688,127.909,26.024)
C1': (18.642,129.397,24.198)
C5': (19.875,126.192,24.473)
O4': (19.735,128.537,23.967)
C8: (17.350,129.088,22.014)
O2': (16.853,129.524,25.758)
C6: (17.583,132.171,20.339)
C5: (17.568,131.009,21.132)
C4: (18.223,131.069,22.350)
P: (18.394,124.514,23.057)
C4': (19.837,127.583,25.064)
C2': (17.696,128.610,25.099)
C2: (18.812,133.168,22.026)
N1: (18.227,133.254,20.825)
N3: (18.869,132.134,22.864)
N6: (17.006,132.258,19.141)
N7: (17.017,129.752,20.934)
N9: (18.087,129.820,22.912)
O5': (18.682,125.941,23.710)
O3': (19.099,128.912,26.973)
Image (generated by PyMOL):
PyMOL image
show in jmol