ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01007:01042

Extra

PDB:
ATOM 1 O3' U A1006 46.317 96.028 104.600 1.00 36.10 O
ATOM 2 P G A1007 46.863 94.878 105.566 1.00 36.10 P
ATOM 3 OP1 G A1007 47.257 95.571 106.814 1.00 39.68 O
ATOM 4 OP2 G A1007 47.840 94.031 104.853 1.00 37.88 O
ATOM 5 O5' G A1007 45.580 93.993 105.871 1.00 37.38 O
ATOM 6 C5' G A1007 44.431 94.589 106.481 1.00 35.44 C
ATOM 7 C4' G A1007 43.264 93.644 106.430 1.00 37.04 C
ATOM 8 O4' G A1007 42.834 93.430 105.058 1.00 38.88 O
ATOM 9 C3' G A1007 43.517 92.238 106.932 1.00 36.14 C
ATOM 10 O3' G A1007 43.533 92.201 108.343 1.00 34.69 O
ATOM 11 C2' G A1007 42.331 91.497 106.332 1.00 37.07 C
ATOM 12 O2' G A1007 41.124 91.810 107.000 1.00 36.24 O
ATOM 13 C1' G A1007 42.278 92.129 104.940 1.00 36.37 C
ATOM 14 N9 G A1007 43.066 91.382 103.967 1.00 35.64 N
ATOM 15 C8 G A1007 44.322 91.688 103.495 1.00 36.13 C
ATOM 16 N7 G A1007 44.766 90.821 102.627 1.00 35.09 N
ATOM 17 C5 G A1007 43.743 89.893 102.518 1.00 33.33 C
ATOM 18 C6 G A1007 43.650 88.734 101.729 1.00 34.46 C
ATOM 19 O6 G A1007 44.479 88.278 100.940 1.00 34.42 O
ATOM 20 N1 G A1007 42.438 88.080 101.923 1.00 34.33 N
ATOM 21 C2 G A1007 41.444 88.499 102.773 1.00 32.89 C
ATOM 22 N2 G A1007 40.344 87.746 102.816 1.00 33.29 N
ATOM 23 N3 G A1007 41.525 89.578 103.521 1.00 31.43 N
ATOM 24 C4 G A1007 42.690 90.224 103.343 1.00 33.00 C
ATOM 25 P C A1008 44.546 91.217 109.094 1.00 34.35 P
ATOM 26 OP1 C A1008 44.448 91.540 110.537 1.00 35.05 O
ATOM 27 OP2 C A1008 45.861 91.247 108.425 1.00 35.41 O
ATOM 28 O5' C A1008 43.939 89.771 108.838 1.00 35.39 O
TER

ATOM 1 O3' A B1041 38.000 95.708 103.156 1.00 39.61 O
ATOM 2 P C B1042 38.701 94.660 104.163 1.00 40.60 P
ATOM 3 OP1 C B1042 40.180 94.699 104.001 1.00 37.71 O
ATOM 4 OP2 C B1042 37.989 93.369 103.985 1.00 39.87 O
ATOM 5 O5' C B1042 38.355 95.202 105.620 1.00 40.08 O
ATOM 6 C5' C B1042 38.805 94.473 106.789 1.00 41.01 C
ATOM 7 C4' C B1042 37.852 94.665 107.946 1.00 38.48 C
ATOM 8 O4' C B1042 37.883 96.043 108.390 1.00 39.79 O
ATOM 9 C3' C B1042 36.385 94.425 107.658 1.00 39.09 C
ATOM 10 O3' C B1042 36.067 93.048 107.665 1.00 42.41 O
ATOM 11 C2' C B1042 35.728 95.177 108.800 1.00 39.17 C
ATOM 12 O2' C B1042 35.863 94.509 110.036 1.00 39.88 O
ATOM 13 C1' C B1042 36.599 96.425 108.855 1.00 38.79 C
ATOM 14 N1 C B1042 36.081 97.506 107.994 1.00 39.65 N
ATOM 15 C2 C B1042 34.928 98.192 108.400 1.00 39.61 C
ATOM 16 O2 C B1042 34.359 97.850 109.450 1.00 39.44 O
ATOM 17 N3 C B1042 34.463 99.204 107.642 1.00 38.83 N
ATOM 18 C4 C B1042 35.095 99.541 106.516 1.00 38.86 C
ATOM 19 N4 C B1042 34.610 100.569 105.816 1.00 37.95 N
ATOM 20 C5 C B1042 36.252 98.847 106.063 1.00 37.05 C
ATOM 21 C6 C B1042 36.708 97.847 106.825 1.00 37.91 C
ATOM 22 P C B1043 34.786 92.533 106.859 1.00 41.70 P
ATOM 23 OP1 C B1043 34.809 91.054 106.906 1.00 42.61 O
ATOM 24 OP2 C B1043 34.728 93.224 105.551 1.00 43.15 O
ATOM 25 O5' C B1043 33.572 93.056 107.735 1.00 40.33 O
TER

Atoms:
OP1: (47.257,95.571,106.814)
OP2: (47.840,94.031,104.853)
C3': (43.517,92.238,106.932)
C1': (42.278,92.129,104.940)
C5': (44.431,94.589,106.481)
O6: (44.479,88.278,100.940)
O4': (42.834,93.430,105.058)
C8: (44.322,91.688,103.495)
C2: (41.444,88.499,102.773)
C6: (43.650,88.734,101.729)
C5: (43.743,89.893,102.518)
C4: (42.690,90.224,103.343)
P: (46.863,94.878,105.566)
C4': (43.264,93.644,106.430)
C2': (42.331,91.497,106.332)
O2': (41.124,91.810,107.000)
N1: (42.438,88.080,101.923)
N2: (40.344,87.746,102.816)
N3: (41.525,89.578,103.521)
N7: (44.766,90.821,102.627)
N9: (43.066,91.382,103.967)
O5': (45.580,93.993,105.871)
O3': (43.533,92.201,108.343)
C2: (34.928,98.192,108.400)
OP1: (40.180,94.699,104.001)
OP2: (37.989,93.369,103.985)
C4: (35.095,99.541,106.516)
O5': (38.355,95.202,105.620)
C3': (36.385,94.425,107.658)
C1': (36.599,96.425,108.855)
O4': (37.883,96.043,108.390)
C5': (38.805,94.473,106.789)
P: (38.701,94.660,104.163)
O2: (34.359,97.850,109.450)
C4': (37.852,94.665,107.946)
C2': (35.728,95.177,108.800)
O2': (35.863,94.509,110.036)
N1: (36.081,97.506,107.994)
N3: (34.463,99.204,107.642)
N4: (34.610,100.569,105.816)
C6: (36.708,97.847,106.825)
C5: (36.252,98.847,106.063)
O3': (36.067,93.048,107.665)
Image (generated by PyMOL):
PyMOL image
show in jmol