Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01007:01042
Extra
PDB:
ATOM 1 O3' U A1006 46.318 96.272 104.624 1.00 30.35 O
ATOM 2 P G A1007 46.826 95.123 105.615 1.00 31.78 P
ATOM 3 OP1 G A1007 47.189 95.812 106.879 1.00 33.48 O
ATOM 4 OP2 G A1007 47.823 94.272 104.926 1.00 32.94 O
ATOM 5 O5' G A1007 45.529 94.242 105.879 1.00 34.20 O
ATOM 6 C5' G A1007 44.376 94.825 106.506 1.00 32.32 C
ATOM 7 C4' G A1007 43.210 93.874 106.457 1.00 33.49 C
ATOM 8 O4' G A1007 42.782 93.662 105.085 1.00 34.36 O
ATOM 9 C3' G A1007 43.464 92.467 106.959 1.00 33.53 C
ATOM 10 O3' G A1007 43.476 92.418 108.374 1.00 32.48 O
ATOM 11 C2' G A1007 42.291 91.716 106.345 1.00 33.69 C
ATOM 12 O2' G A1007 41.069 91.992 107.000 1.00 32.59 O
ATOM 13 C1' G A1007 42.239 92.357 104.957 1.00 33.38 C
ATOM 14 N9 G A1007 43.035 91.620 103.982 1.00 32.61 N
ATOM 15 C8 G A1007 44.284 91.941 103.509 1.00 33.64 C
ATOM 16 N7 G A1007 44.739 91.079 102.640 1.00 33.35 N
ATOM 17 C5 G A1007 43.730 90.136 102.535 1.00 30.30 C
ATOM 18 C6 G A1007 43.651 88.972 101.743 1.00 30.23 C
ATOM 19 O6 G A1007 44.483 88.526 100.952 1.00 28.19 O
ATOM 20 N1 G A1007 42.448 88.304 101.939 1.00 30.45 N
ATOM 21 C2 G A1007 41.448 88.712 102.786 1.00 29.98 C
ATOM 22 N2 G A1007 40.358 87.948 102.820 1.00 30.48 N
ATOM 23 N3 G A1007 41.514 89.793 103.536 1.00 28.99 N
ATOM 24 C4 G A1007 42.673 90.454 103.359 1.00 30.42 C
ATOM 25 P C A1008 44.489 91.425 109.125 1.00 32.18 P
ATOM 26 OP1 C A1008 44.371 91.735 110.572 1.00 31.94 O
ATOM 27 OP2 C A1008 45.817 91.468 108.471 1.00 30.69 O
ATOM 28 O5' C A1008 43.886 89.980 108.847 1.00 32.35 O
TER
ATOM 1 O3' A B1041 38.011 95.880 103.131 1.00 34.89 O
ATOM 2 P C B1042 38.707 94.865 104.176 1.00 35.60 P
ATOM 3 OP1 C B1042 40.185 94.883 104.015 1.00 34.74 O
ATOM 4 OP2 C B1042 37.982 93.576 104.032 1.00 36.16 O
ATOM 5 O5' C B1042 38.360 95.458 105.615 1.00 35.38 O
ATOM 6 C5' C B1042 38.803 94.764 106.811 1.00 37.16 C
ATOM 7 C4' C B1042 37.826 94.959 107.953 1.00 35.07 C
ATOM 8 O4' C B1042 37.843 96.338 108.406 1.00 36.29 O
ATOM 9 C3' C B1042 36.363 94.699 107.656 1.00 34.77 C
ATOM 10 O3' C B1042 36.054 93.317 107.677 1.00 37.41 O
ATOM 11 C2' C B1042 35.684 95.452 108.787 1.00 35.19 C
ATOM 12 O2' C B1042 35.782 94.773 110.020 1.00 33.93 O
ATOM 13 C1' C B1042 36.550 96.707 108.858 1.00 34.98 C
ATOM 14 N1 C B1042 36.035 97.792 107.999 1.00 35.20 N
ATOM 15 C2 C B1042 34.855 98.443 108.380 1.00 35.40 C
ATOM 16 O2 C B1042 34.271 98.080 109.416 1.00 35.88 O
ATOM 17 N3 C B1042 34.381 99.448 107.613 1.00 34.87 N
ATOM 18 C4 C B1042 35.031 99.809 106.506 1.00 33.91 C
ATOM 19 N4 C B1042 34.533 100.819 105.796 1.00 32.37 N
ATOM 20 C5 C B1042 36.223 99.154 106.085 1.00 32.04 C
ATOM 21 C6 C B1042 36.686 98.162 106.854 1.00 33.26 C
ATOM 22 P C B1043 34.778 92.782 106.867 1.00 36.53 P
ATOM 23 OP1 C B1043 34.808 91.301 106.906 1.00 37.15 O
ATOM 24 OP2 C B1043 34.729 93.481 105.562 1.00 37.80 O
ATOM 25 O5' C B1043 33.548 93.285 107.733 1.00 34.26 O
TER
ATOM 2 P G A1007 46.826 95.123 105.615 1.00 31.78 P
ATOM 3 OP1 G A1007 47.189 95.812 106.879 1.00 33.48 O
ATOM 4 OP2 G A1007 47.823 94.272 104.926 1.00 32.94 O
ATOM 5 O5' G A1007 45.529 94.242 105.879 1.00 34.20 O
ATOM 6 C5' G A1007 44.376 94.825 106.506 1.00 32.32 C
ATOM 7 C4' G A1007 43.210 93.874 106.457 1.00 33.49 C
ATOM 8 O4' G A1007 42.782 93.662 105.085 1.00 34.36 O
ATOM 9 C3' G A1007 43.464 92.467 106.959 1.00 33.53 C
ATOM 10 O3' G A1007 43.476 92.418 108.374 1.00 32.48 O
ATOM 11 C2' G A1007 42.291 91.716 106.345 1.00 33.69 C
ATOM 12 O2' G A1007 41.069 91.992 107.000 1.00 32.59 O
ATOM 13 C1' G A1007 42.239 92.357 104.957 1.00 33.38 C
ATOM 14 N9 G A1007 43.035 91.620 103.982 1.00 32.61 N
ATOM 15 C8 G A1007 44.284 91.941 103.509 1.00 33.64 C
ATOM 16 N7 G A1007 44.739 91.079 102.640 1.00 33.35 N
ATOM 17 C5 G A1007 43.730 90.136 102.535 1.00 30.30 C
ATOM 18 C6 G A1007 43.651 88.972 101.743 1.00 30.23 C
ATOM 19 O6 G A1007 44.483 88.526 100.952 1.00 28.19 O
ATOM 20 N1 G A1007 42.448 88.304 101.939 1.00 30.45 N
ATOM 21 C2 G A1007 41.448 88.712 102.786 1.00 29.98 C
ATOM 22 N2 G A1007 40.358 87.948 102.820 1.00 30.48 N
ATOM 23 N3 G A1007 41.514 89.793 103.536 1.00 28.99 N
ATOM 24 C4 G A1007 42.673 90.454 103.359 1.00 30.42 C
ATOM 25 P C A1008 44.489 91.425 109.125 1.00 32.18 P
ATOM 26 OP1 C A1008 44.371 91.735 110.572 1.00 31.94 O
ATOM 27 OP2 C A1008 45.817 91.468 108.471 1.00 30.69 O
ATOM 28 O5' C A1008 43.886 89.980 108.847 1.00 32.35 O
TER
ATOM 1 O3' A B1041 38.011 95.880 103.131 1.00 34.89 O
ATOM 2 P C B1042 38.707 94.865 104.176 1.00 35.60 P
ATOM 3 OP1 C B1042 40.185 94.883 104.015 1.00 34.74 O
ATOM 4 OP2 C B1042 37.982 93.576 104.032 1.00 36.16 O
ATOM 5 O5' C B1042 38.360 95.458 105.615 1.00 35.38 O
ATOM 6 C5' C B1042 38.803 94.764 106.811 1.00 37.16 C
ATOM 7 C4' C B1042 37.826 94.959 107.953 1.00 35.07 C
ATOM 8 O4' C B1042 37.843 96.338 108.406 1.00 36.29 O
ATOM 9 C3' C B1042 36.363 94.699 107.656 1.00 34.77 C
ATOM 10 O3' C B1042 36.054 93.317 107.677 1.00 37.41 O
ATOM 11 C2' C B1042 35.684 95.452 108.787 1.00 35.19 C
ATOM 12 O2' C B1042 35.782 94.773 110.020 1.00 33.93 O
ATOM 13 C1' C B1042 36.550 96.707 108.858 1.00 34.98 C
ATOM 14 N1 C B1042 36.035 97.792 107.999 1.00 35.20 N
ATOM 15 C2 C B1042 34.855 98.443 108.380 1.00 35.40 C
ATOM 16 O2 C B1042 34.271 98.080 109.416 1.00 35.88 O
ATOM 17 N3 C B1042 34.381 99.448 107.613 1.00 34.87 N
ATOM 18 C4 C B1042 35.031 99.809 106.506 1.00 33.91 C
ATOM 19 N4 C B1042 34.533 100.819 105.796 1.00 32.37 N
ATOM 20 C5 C B1042 36.223 99.154 106.085 1.00 32.04 C
ATOM 21 C6 C B1042 36.686 98.162 106.854 1.00 33.26 C
ATOM 22 P C B1043 34.778 92.782 106.867 1.00 36.53 P
ATOM 23 OP1 C B1043 34.808 91.301 106.906 1.00 37.15 O
ATOM 24 OP2 C B1043 34.729 93.481 105.562 1.00 37.80 O
ATOM 25 O5' C B1043 33.548 93.285 107.733 1.00 34.26 O
TER
Atoms:
OP1: (47.189,95.812,106.879)
OP2: (47.823,94.272,104.926)
C3': (43.464,92.467,106.959)
C1': (42.239,92.357,104.957)
C5': (44.376,94.825,106.506)
O6: (44.483,88.526,100.952)
O4': (42.782,93.662,105.085)
C8: (44.284,91.941,103.509)
C2: (41.448,88.712,102.786)
C6: (43.651,88.972,101.743)
C5: (43.730,90.136,102.535)
C4: (42.673,90.454,103.359)
P: (46.826,95.123,105.615)
C4': (43.210,93.874,106.457)
C2': (42.291,91.716,106.345)
O2': (41.069,91.992,107.000)
N1: (42.448,88.304,101.939)
N2: (40.358,87.948,102.820)
N3: (41.514,89.793,103.536)
N7: (44.739,91.079,102.640)
N9: (43.035,91.620,103.982)
O5': (45.529,94.242,105.879)
O3': (43.476,92.418,108.374)
OP2: (47.823,94.272,104.926)
C3': (43.464,92.467,106.959)
C1': (42.239,92.357,104.957)
C5': (44.376,94.825,106.506)
O6: (44.483,88.526,100.952)
O4': (42.782,93.662,105.085)
C8: (44.284,91.941,103.509)
C2: (41.448,88.712,102.786)
C6: (43.651,88.972,101.743)
C5: (43.730,90.136,102.535)
C4: (42.673,90.454,103.359)
P: (46.826,95.123,105.615)
C4': (43.210,93.874,106.457)
C2': (42.291,91.716,106.345)
O2': (41.069,91.992,107.000)
N1: (42.448,88.304,101.939)
N2: (40.358,87.948,102.820)
N3: (41.514,89.793,103.536)
N7: (44.739,91.079,102.640)
N9: (43.035,91.620,103.982)
O5': (45.529,94.242,105.879)
O3': (43.476,92.418,108.374)
C2: (34.855,98.443,108.380)
OP1: (40.185,94.883,104.015)
OP2: (37.982,93.576,104.032)
C4: (35.031,99.809,106.506)
O5': (38.360,95.458,105.615)
C3': (36.363,94.699,107.656)
C1': (36.550,96.707,108.858)
O4': (37.843,96.338,108.406)
C5': (38.803,94.764,106.811)
P: (38.707,94.865,104.176)
O2: (34.271,98.080,109.416)
C4': (37.826,94.959,107.953)
C2': (35.684,95.452,108.787)
O2': (35.782,94.773,110.020)
N1: (36.035,97.792,107.999)
N3: (34.381,99.448,107.613)
N4: (34.533,100.819,105.796)
C6: (36.686,98.162,106.854)
C5: (36.223,99.154,106.085)
O3': (36.054,93.317,107.677)
OP1: (40.185,94.883,104.015)
OP2: (37.982,93.576,104.032)
C4: (35.031,99.809,106.506)
O5': (38.360,95.458,105.615)
C3': (36.363,94.699,107.656)
C1': (36.550,96.707,108.858)
O4': (37.843,96.338,108.406)
C5': (38.803,94.764,106.811)
P: (38.707,94.865,104.176)
O2: (34.271,98.080,109.416)
C4': (37.826,94.959,107.953)
C2': (35.684,95.452,108.787)
O2': (35.782,94.773,110.020)
N1: (36.035,97.792,107.999)
N3: (34.381,99.448,107.613)
N4: (34.533,100.819,105.796)
C6: (36.686,98.162,106.854)
C5: (36.223,99.154,106.085)
O3': (36.054,93.317,107.677)
Image (generated by PyMOL):