Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01007:01042
Extra
PDB:
ATOM 1 O3' U A1006 46.455 96.329 104.912 1.00 36.35 O
ATOM 2 P G A1007 46.953 95.211 105.939 1.00 36.90 P
ATOM 3 OP1 G A1007 47.261 95.950 107.188 1.00 38.49 O
ATOM 4 OP2 G A1007 47.999 94.372 105.306 1.00 38.94 O
ATOM 5 O5' G A1007 45.655 94.324 106.186 1.00 37.93 O
ATOM 6 C5' G A1007 44.508 94.903 106.836 1.00 39.31 C
ATOM 7 C4' G A1007 43.343 93.945 106.834 1.00 40.23 C
ATOM 8 O4' G A1007 42.830 93.745 105.490 1.00 42.04 O
ATOM 9 C3' G A1007 43.626 92.538 107.311 1.00 38.99 C
ATOM 10 O3' G A1007 43.701 92.489 108.715 1.00 38.28 O
ATOM 11 C2' G A1007 42.424 91.790 106.755 1.00 39.71 C
ATOM 12 O2' G A1007 41.239 92.095 107.457 1.00 39.28 O
ATOM 13 C1' G A1007 42.317 92.427 105.374 1.00 39.06 C
ATOM 14 N9 G A1007 43.124 91.713 104.393 1.00 38.47 N
ATOM 15 C8 G A1007 44.362 92.061 103.908 1.00 37.90 C
ATOM 16 N7 G A1007 44.814 91.224 103.011 1.00 35.90 N
ATOM 17 C5 G A1007 43.819 90.268 102.908 1.00 34.94 C
ATOM 18 C6 G A1007 43.738 89.139 102.094 1.00 34.93 C
ATOM 19 O6 G A1007 44.552 88.731 101.269 1.00 36.07 O
ATOM 20 N1 G A1007 42.555 88.449 102.301 1.00 35.81 N
ATOM 21 C2 G A1007 41.571 88.811 103.184 1.00 35.39 C
ATOM 22 N2 G A1007 40.506 88.014 103.234 1.00 38.90 N
ATOM 23 N3 G A1007 41.631 89.870 103.954 1.00 34.08 N
ATOM 24 C4 G A1007 42.774 90.551 103.764 1.00 36.87 C
ATOM 25 P C A1008 44.716 91.467 109.409 1.00 38.28 P
ATOM 26 OP1 C A1008 44.701 91.745 110.867 1.00 38.01 O
ATOM 27 OP2 C A1008 45.994 91.491 108.659 1.00 40.88 O
ATOM 28 O5' C A1008 44.068 90.049 109.140 1.00 37.15 O
TER
ATOM 1 O3' A B1041 38.179 96.020 103.451 1.00 42.13 O
ATOM 2 P C B1042 38.888 94.972 104.451 1.00 43.58 P
ATOM 3 OP1 C B1042 40.363 95.106 104.353 1.00 45.28 O
ATOM 4 OP2 C B1042 38.264 93.651 104.206 1.00 42.26 O
ATOM 5 O5' C B1042 38.469 95.457 105.911 1.00 43.41 O
ATOM 6 C5' C B1042 38.934 94.741 107.082 1.00 41.79 C
ATOM 7 C4' C B1042 38.001 94.956 108.261 1.00 40.34 C
ATOM 8 O4' C B1042 38.053 96.334 108.707 1.00 40.28 O
ATOM 9 C3' C B1042 36.523 94.722 108.018 1.00 39.95 C
ATOM 10 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 11 C2' C B1042 35.891 95.494 109.160 1.00 39.31 C
ATOM 12 O2' C B1042 36.027 94.831 110.394 1.00 39.63 O
ATOM 13 C1' C B1042 36.779 96.731 109.194 1.00 39.66 C
ATOM 14 N1 C B1042 36.260 97.809 108.333 1.00 39.88 N
ATOM 15 C2 C B1042 35.083 98.453 108.697 1.00 39.06 C
ATOM 16 O2 C B1042 34.481 98.072 109.700 1.00 40.07 O
ATOM 17 N3 C B1042 34.630 99.471 107.945 1.00 39.20 N
ATOM 18 C4 C B1042 35.299 99.845 106.858 1.00 39.51 C
ATOM 19 N4 C B1042 34.835 100.879 106.163 1.00 41.12 N
ATOM 20 C5 C B1042 36.480 99.184 106.439 1.00 39.48 C
ATOM 21 C6 C B1042 36.924 98.183 107.198 1.00 39.75 C
ATOM 22 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 23 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 24 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 25 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
TER
ATOM 2 P G A1007 46.953 95.211 105.939 1.00 36.90 P
ATOM 3 OP1 G A1007 47.261 95.950 107.188 1.00 38.49 O
ATOM 4 OP2 G A1007 47.999 94.372 105.306 1.00 38.94 O
ATOM 5 O5' G A1007 45.655 94.324 106.186 1.00 37.93 O
ATOM 6 C5' G A1007 44.508 94.903 106.836 1.00 39.31 C
ATOM 7 C4' G A1007 43.343 93.945 106.834 1.00 40.23 C
ATOM 8 O4' G A1007 42.830 93.745 105.490 1.00 42.04 O
ATOM 9 C3' G A1007 43.626 92.538 107.311 1.00 38.99 C
ATOM 10 O3' G A1007 43.701 92.489 108.715 1.00 38.28 O
ATOM 11 C2' G A1007 42.424 91.790 106.755 1.00 39.71 C
ATOM 12 O2' G A1007 41.239 92.095 107.457 1.00 39.28 O
ATOM 13 C1' G A1007 42.317 92.427 105.374 1.00 39.06 C
ATOM 14 N9 G A1007 43.124 91.713 104.393 1.00 38.47 N
ATOM 15 C8 G A1007 44.362 92.061 103.908 1.00 37.90 C
ATOM 16 N7 G A1007 44.814 91.224 103.011 1.00 35.90 N
ATOM 17 C5 G A1007 43.819 90.268 102.908 1.00 34.94 C
ATOM 18 C6 G A1007 43.738 89.139 102.094 1.00 34.93 C
ATOM 19 O6 G A1007 44.552 88.731 101.269 1.00 36.07 O
ATOM 20 N1 G A1007 42.555 88.449 102.301 1.00 35.81 N
ATOM 21 C2 G A1007 41.571 88.811 103.184 1.00 35.39 C
ATOM 22 N2 G A1007 40.506 88.014 103.234 1.00 38.90 N
ATOM 23 N3 G A1007 41.631 89.870 103.954 1.00 34.08 N
ATOM 24 C4 G A1007 42.774 90.551 103.764 1.00 36.87 C
ATOM 25 P C A1008 44.716 91.467 109.409 1.00 38.28 P
ATOM 26 OP1 C A1008 44.701 91.745 110.867 1.00 38.01 O
ATOM 27 OP2 C A1008 45.994 91.491 108.659 1.00 40.88 O
ATOM 28 O5' C A1008 44.068 90.049 109.140 1.00 37.15 O
TER
ATOM 1 O3' A B1041 38.179 96.020 103.451 1.00 42.13 O
ATOM 2 P C B1042 38.888 94.972 104.451 1.00 43.58 P
ATOM 3 OP1 C B1042 40.363 95.106 104.353 1.00 45.28 O
ATOM 4 OP2 C B1042 38.264 93.651 104.206 1.00 42.26 O
ATOM 5 O5' C B1042 38.469 95.457 105.911 1.00 43.41 O
ATOM 6 C5' C B1042 38.934 94.741 107.082 1.00 41.79 C
ATOM 7 C4' C B1042 38.001 94.956 108.261 1.00 40.34 C
ATOM 8 O4' C B1042 38.053 96.334 108.707 1.00 40.28 O
ATOM 9 C3' C B1042 36.523 94.722 108.018 1.00 39.95 C
ATOM 10 O3' C B1042 36.179 93.355 108.049 1.00 41.18 O
ATOM 11 C2' C B1042 35.891 95.494 109.160 1.00 39.31 C
ATOM 12 O2' C B1042 36.027 94.831 110.394 1.00 39.63 O
ATOM 13 C1' C B1042 36.779 96.731 109.194 1.00 39.66 C
ATOM 14 N1 C B1042 36.260 97.809 108.333 1.00 39.88 N
ATOM 15 C2 C B1042 35.083 98.453 108.697 1.00 39.06 C
ATOM 16 O2 C B1042 34.481 98.072 109.700 1.00 40.07 O
ATOM 17 N3 C B1042 34.630 99.471 107.945 1.00 39.20 N
ATOM 18 C4 C B1042 35.299 99.845 106.858 1.00 39.51 C
ATOM 19 N4 C B1042 34.835 100.879 106.163 1.00 41.12 N
ATOM 20 C5 C B1042 36.480 99.184 106.439 1.00 39.48 C
ATOM 21 C6 C B1042 36.924 98.183 107.198 1.00 39.75 C
ATOM 22 P C B1043 34.945 92.849 107.172 1.00 42.28 P
ATOM 23 OP1 C B1043 34.941 91.361 107.152 1.00 41.39 O
ATOM 24 OP2 C B1043 34.993 93.608 105.904 1.00 40.44 O
ATOM 25 O5' C B1043 33.684 93.322 108.011 1.00 40.05 O
TER
Atoms:
OP1: (47.261,95.950,107.188)
OP2: (47.999,94.372,105.306)
C3': (43.626,92.538,107.311)
C1': (42.317,92.427,105.374)
C5': (44.508,94.903,106.836)
O6: (44.552,88.731,101.269)
O4': (42.830,93.745,105.490)
C8: (44.362,92.061,103.908)
C2: (41.571,88.811,103.184)
C6: (43.738,89.139,102.094)
C5: (43.819,90.268,102.908)
C4: (42.774,90.551,103.764)
P: (46.953,95.211,105.939)
C4': (43.343,93.945,106.834)
C2': (42.424,91.790,106.755)
O2': (41.239,92.095,107.457)
N1: (42.555,88.449,102.301)
N2: (40.506,88.014,103.234)
N3: (41.631,89.870,103.954)
N7: (44.814,91.224,103.011)
N9: (43.124,91.713,104.393)
O5': (45.655,94.324,106.186)
O3': (43.701,92.489,108.715)
OP2: (47.999,94.372,105.306)
C3': (43.626,92.538,107.311)
C1': (42.317,92.427,105.374)
C5': (44.508,94.903,106.836)
O6: (44.552,88.731,101.269)
O4': (42.830,93.745,105.490)
C8: (44.362,92.061,103.908)
C2: (41.571,88.811,103.184)
C6: (43.738,89.139,102.094)
C5: (43.819,90.268,102.908)
C4: (42.774,90.551,103.764)
P: (46.953,95.211,105.939)
C4': (43.343,93.945,106.834)
C2': (42.424,91.790,106.755)
O2': (41.239,92.095,107.457)
N1: (42.555,88.449,102.301)
N2: (40.506,88.014,103.234)
N3: (41.631,89.870,103.954)
N7: (44.814,91.224,103.011)
N9: (43.124,91.713,104.393)
O5': (45.655,94.324,106.186)
O3': (43.701,92.489,108.715)
C2: (35.083,98.453,108.697)
OP1: (40.363,95.106,104.353)
OP2: (38.264,93.651,104.206)
C4: (35.299,99.845,106.858)
O5': (38.469,95.457,105.911)
C3': (36.523,94.722,108.018)
C1': (36.779,96.731,109.194)
O4': (38.053,96.334,108.707)
C5': (38.934,94.741,107.082)
P: (38.888,94.972,104.451)
O2: (34.481,98.072,109.700)
C4': (38.001,94.956,108.261)
C2': (35.891,95.494,109.160)
O2': (36.027,94.831,110.394)
N1: (36.260,97.809,108.333)
N3: (34.630,99.471,107.945)
N4: (34.835,100.879,106.163)
C6: (36.924,98.183,107.198)
C5: (36.480,99.184,106.439)
O3': (36.179,93.355,108.049)
OP1: (40.363,95.106,104.353)
OP2: (38.264,93.651,104.206)
C4: (35.299,99.845,106.858)
O5': (38.469,95.457,105.911)
C3': (36.523,94.722,108.018)
C1': (36.779,96.731,109.194)
O4': (38.053,96.334,108.707)
C5': (38.934,94.741,107.082)
P: (38.888,94.972,104.451)
O2: (34.481,98.072,109.700)
C4': (38.001,94.956,108.261)
C2': (35.891,95.494,109.160)
O2': (36.027,94.831,110.394)
N1: (36.260,97.809,108.333)
N3: (34.630,99.471,107.945)
N4: (34.835,100.879,106.163)
C6: (36.924,98.183,107.198)
C5: (36.480,99.184,106.439)
O3': (36.179,93.355,108.049)
Image (generated by PyMOL):