Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01007:01042
Extra
PDB:
ATOM 1 O3' U A1006 46.398 96.116 104.540 1.00 34.22 O
ATOM 2 P G A1007 46.808 94.944 105.549 1.00 34.71 P
ATOM 3 OP1 G A1007 47.141 95.606 106.832 1.00 35.65 O
ATOM 4 OP2 G A1007 47.800 94.064 104.898 1.00 35.60 O
ATOM 5 O5' G A1007 45.459 94.125 105.736 1.00 36.36 O
ATOM 6 C5' G A1007 44.332 94.737 106.387 1.00 39.01 C
ATOM 7 C4' G A1007 43.157 93.798 106.401 1.00 39.71 C
ATOM 8 O4' G A1007 42.661 93.606 105.052 1.00 39.91 O
ATOM 9 C3' G A1007 43.455 92.392 106.880 1.00 38.31 C
ATOM 10 O3' G A1007 43.495 92.318 108.290 1.00 37.30 O
ATOM 11 C2' G A1007 42.300 91.610 106.281 1.00 38.96 C
ATOM 12 O2' G A1007 41.092 91.803 106.984 1.00 38.68 O
ATOM 13 C1' G A1007 42.188 92.278 104.912 1.00 38.75 C
ATOM 14 N9 G A1007 43.020 91.600 103.930 1.00 37.40 N
ATOM 15 C8 G A1007 44.261 91.975 103.475 1.00 37.31 C
ATOM 16 N7 G A1007 44.746 91.154 102.586 1.00 35.91 N
ATOM 17 C5 G A1007 43.767 90.186 102.450 1.00 34.83 C
ATOM 18 C6 G A1007 43.723 89.057 101.629 1.00 35.57 C
ATOM 19 O6 G A1007 44.571 88.660 100.824 1.00 37.60 O
ATOM 20 N1 G A1007 42.540 88.350 101.803 1.00 36.09 N
ATOM 21 C2 G A1007 41.531 88.697 102.662 1.00 34.87 C
ATOM 22 N2 G A1007 40.468 87.900 102.684 1.00 36.66 N
ATOM 23 N3 G A1007 41.564 89.749 103.438 1.00 34.34 N
ATOM 24 C4 G A1007 42.701 90.447 103.279 1.00 35.56 C
ATOM 25 P C A1008 44.482 91.274 108.986 1.00 35.98 P
ATOM 26 OP1 C A1008 44.425 91.487 110.447 1.00 35.05 O
ATOM 27 OP2 C A1008 45.778 91.333 108.276 1.00 36.25 O
ATOM 28 O5' C A1008 43.836 89.868 108.657 1.00 36.43 O
TER
ATOM 1 O3' A B1041 38.038 95.815 103.120 1.00 42.40 O
ATOM 2 P C B1042 38.760 94.780 104.122 1.00 44.65 P
ATOM 3 OP1 C B1042 40.234 94.867 103.958 1.00 45.17 O
ATOM 4 OP2 C B1042 38.087 93.464 103.943 1.00 42.99 O
ATOM 5 O5' C B1042 38.387 95.322 105.576 1.00 44.77 O
ATOM 6 C5' C B1042 38.825 94.612 106.761 1.00 44.00 C
ATOM 7 C4' C B1042 37.866 94.832 107.914 1.00 42.55 C
ATOM 8 O4' C B1042 37.906 96.211 108.363 1.00 43.70 O
ATOM 9 C3' C B1042 36.397 94.597 107.629 1.00 41.51 C
ATOM 10 O3' C B1042 36.086 93.228 107.686 1.00 41.65 O
ATOM 11 C2' C B1042 35.742 95.352 108.765 1.00 41.98 C
ATOM 12 O2' C B1042 35.886 94.645 109.975 1.00 43.33 O
ATOM 13 C1' C B1042 36.623 96.597 108.830 1.00 42.54 C
ATOM 14 N1 C B1042 36.124 97.681 107.966 1.00 43.75 N
ATOM 15 C2 C B1042 34.954 98.363 108.332 1.00 43.62 C
ATOM 16 O2 C B1042 34.353 98.029 109.362 1.00 42.84 O
ATOM 17 N3 C B1042 34.506 99.364 107.547 1.00 44.14 N
ATOM 18 C4 C B1042 35.166 99.687 106.434 1.00 44.46 C
ATOM 19 N4 C B1042 34.689 100.688 105.695 1.00 46.06 N
ATOM 20 C5 C B1042 36.346 99.002 106.031 1.00 44.80 C
ATOM 21 C6 C B1042 36.787 98.020 106.819 1.00 44.62 C
ATOM 22 P C B1043 34.839 92.672 106.859 1.00 42.43 P
ATOM 23 OP1 C B1043 34.891 91.190 106.972 1.00 42.60 O
ATOM 24 OP2 C B1043 34.817 93.313 105.519 1.00 40.30 O
ATOM 25 O5' C B1043 33.594 93.188 107.692 1.00 39.56 O
TER
ATOM 2 P G A1007 46.808 94.944 105.549 1.00 34.71 P
ATOM 3 OP1 G A1007 47.141 95.606 106.832 1.00 35.65 O
ATOM 4 OP2 G A1007 47.800 94.064 104.898 1.00 35.60 O
ATOM 5 O5' G A1007 45.459 94.125 105.736 1.00 36.36 O
ATOM 6 C5' G A1007 44.332 94.737 106.387 1.00 39.01 C
ATOM 7 C4' G A1007 43.157 93.798 106.401 1.00 39.71 C
ATOM 8 O4' G A1007 42.661 93.606 105.052 1.00 39.91 O
ATOM 9 C3' G A1007 43.455 92.392 106.880 1.00 38.31 C
ATOM 10 O3' G A1007 43.495 92.318 108.290 1.00 37.30 O
ATOM 11 C2' G A1007 42.300 91.610 106.281 1.00 38.96 C
ATOM 12 O2' G A1007 41.092 91.803 106.984 1.00 38.68 O
ATOM 13 C1' G A1007 42.188 92.278 104.912 1.00 38.75 C
ATOM 14 N9 G A1007 43.020 91.600 103.930 1.00 37.40 N
ATOM 15 C8 G A1007 44.261 91.975 103.475 1.00 37.31 C
ATOM 16 N7 G A1007 44.746 91.154 102.586 1.00 35.91 N
ATOM 17 C5 G A1007 43.767 90.186 102.450 1.00 34.83 C
ATOM 18 C6 G A1007 43.723 89.057 101.629 1.00 35.57 C
ATOM 19 O6 G A1007 44.571 88.660 100.824 1.00 37.60 O
ATOM 20 N1 G A1007 42.540 88.350 101.803 1.00 36.09 N
ATOM 21 C2 G A1007 41.531 88.697 102.662 1.00 34.87 C
ATOM 22 N2 G A1007 40.468 87.900 102.684 1.00 36.66 N
ATOM 23 N3 G A1007 41.564 89.749 103.438 1.00 34.34 N
ATOM 24 C4 G A1007 42.701 90.447 103.279 1.00 35.56 C
ATOM 25 P C A1008 44.482 91.274 108.986 1.00 35.98 P
ATOM 26 OP1 C A1008 44.425 91.487 110.447 1.00 35.05 O
ATOM 27 OP2 C A1008 45.778 91.333 108.276 1.00 36.25 O
ATOM 28 O5' C A1008 43.836 89.868 108.657 1.00 36.43 O
TER
ATOM 1 O3' A B1041 38.038 95.815 103.120 1.00 42.40 O
ATOM 2 P C B1042 38.760 94.780 104.122 1.00 44.65 P
ATOM 3 OP1 C B1042 40.234 94.867 103.958 1.00 45.17 O
ATOM 4 OP2 C B1042 38.087 93.464 103.943 1.00 42.99 O
ATOM 5 O5' C B1042 38.387 95.322 105.576 1.00 44.77 O
ATOM 6 C5' C B1042 38.825 94.612 106.761 1.00 44.00 C
ATOM 7 C4' C B1042 37.866 94.832 107.914 1.00 42.55 C
ATOM 8 O4' C B1042 37.906 96.211 108.363 1.00 43.70 O
ATOM 9 C3' C B1042 36.397 94.597 107.629 1.00 41.51 C
ATOM 10 O3' C B1042 36.086 93.228 107.686 1.00 41.65 O
ATOM 11 C2' C B1042 35.742 95.352 108.765 1.00 41.98 C
ATOM 12 O2' C B1042 35.886 94.645 109.975 1.00 43.33 O
ATOM 13 C1' C B1042 36.623 96.597 108.830 1.00 42.54 C
ATOM 14 N1 C B1042 36.124 97.681 107.966 1.00 43.75 N
ATOM 15 C2 C B1042 34.954 98.363 108.332 1.00 43.62 C
ATOM 16 O2 C B1042 34.353 98.029 109.362 1.00 42.84 O
ATOM 17 N3 C B1042 34.506 99.364 107.547 1.00 44.14 N
ATOM 18 C4 C B1042 35.166 99.687 106.434 1.00 44.46 C
ATOM 19 N4 C B1042 34.689 100.688 105.695 1.00 46.06 N
ATOM 20 C5 C B1042 36.346 99.002 106.031 1.00 44.80 C
ATOM 21 C6 C B1042 36.787 98.020 106.819 1.00 44.62 C
ATOM 22 P C B1043 34.839 92.672 106.859 1.00 42.43 P
ATOM 23 OP1 C B1043 34.891 91.190 106.972 1.00 42.60 O
ATOM 24 OP2 C B1043 34.817 93.313 105.519 1.00 40.30 O
ATOM 25 O5' C B1043 33.594 93.188 107.692 1.00 39.56 O
TER
Atoms:
OP1: (47.141,95.606,106.832)
OP2: (47.800,94.064,104.898)
C3': (43.455,92.392,106.880)
C1': (42.188,92.278,104.912)
C5': (44.332,94.737,106.387)
O6: (44.571,88.660,100.824)
O4': (42.661,93.606,105.052)
C8: (44.261,91.975,103.475)
C2: (41.531,88.697,102.662)
C6: (43.723,89.057,101.629)
C5: (43.767,90.186,102.450)
C4: (42.701,90.447,103.279)
P: (46.808,94.944,105.549)
C4': (43.157,93.798,106.401)
C2': (42.300,91.610,106.281)
O2': (41.092,91.803,106.984)
N1: (42.540,88.350,101.803)
N2: (40.468,87.900,102.684)
N3: (41.564,89.749,103.438)
N7: (44.746,91.154,102.586)
N9: (43.020,91.600,103.930)
O5': (45.459,94.125,105.736)
O3': (43.495,92.318,108.290)
OP2: (47.800,94.064,104.898)
C3': (43.455,92.392,106.880)
C1': (42.188,92.278,104.912)
C5': (44.332,94.737,106.387)
O6: (44.571,88.660,100.824)
O4': (42.661,93.606,105.052)
C8: (44.261,91.975,103.475)
C2: (41.531,88.697,102.662)
C6: (43.723,89.057,101.629)
C5: (43.767,90.186,102.450)
C4: (42.701,90.447,103.279)
P: (46.808,94.944,105.549)
C4': (43.157,93.798,106.401)
C2': (42.300,91.610,106.281)
O2': (41.092,91.803,106.984)
N1: (42.540,88.350,101.803)
N2: (40.468,87.900,102.684)
N3: (41.564,89.749,103.438)
N7: (44.746,91.154,102.586)
N9: (43.020,91.600,103.930)
O5': (45.459,94.125,105.736)
O3': (43.495,92.318,108.290)
C2: (34.954,98.363,108.332)
OP1: (40.234,94.867,103.958)
OP2: (38.087,93.464,103.943)
C4: (35.166,99.687,106.434)
O5': (38.387,95.322,105.576)
C3': (36.397,94.597,107.629)
C1': (36.623,96.597,108.830)
O4': (37.906,96.211,108.363)
C5': (38.825,94.612,106.761)
P: (38.760,94.780,104.122)
O2: (34.353,98.029,109.362)
C4': (37.866,94.832,107.914)
C2': (35.742,95.352,108.765)
O2': (35.886,94.645,109.975)
N1: (36.124,97.681,107.966)
N3: (34.506,99.364,107.547)
N4: (34.689,100.688,105.695)
C6: (36.787,98.020,106.819)
C5: (36.346,99.002,106.031)
O3': (36.086,93.228,107.686)
OP1: (40.234,94.867,103.958)
OP2: (38.087,93.464,103.943)
C4: (35.166,99.687,106.434)
O5': (38.387,95.322,105.576)
C3': (36.397,94.597,107.629)
C1': (36.623,96.597,108.830)
O4': (37.906,96.211,108.363)
C5': (38.825,94.612,106.761)
P: (38.760,94.780,104.122)
O2: (34.353,98.029,109.362)
C4': (37.866,94.832,107.914)
C2': (35.742,95.352,108.765)
O2': (35.886,94.645,109.975)
N1: (36.124,97.681,107.966)
N3: (34.506,99.364,107.547)
N4: (34.689,100.688,105.695)
C6: (36.787,98.020,106.819)
C5: (36.346,99.002,106.031)
O3': (36.086,93.228,107.686)
Image (generated by PyMOL):