ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2HVY:E30:E31

Extra

PDB:
ATOM 1 O3' C A 29 -27.955 -33.657 36.498 1.00 43.11 O
ATOM 2 P A A 30 -26.382 -33.844 36.743 1.00 41.64 P
ATOM 3 OP1 A A 30 -25.690 -32.704 36.108 1.00 42.00 O
ATOM 4 OP2 A A 30 -25.991 -35.224 36.372 1.00 41.87 O
ATOM 5 O5' A A 30 -26.256 -33.702 38.332 1.00 41.28 O
ATOM 6 C5' A A 30 -26.970 -34.580 39.197 1.00 39.84 C
ATOM 7 C4' A A 30 -26.497 -34.445 40.638 1.00 39.14 C
ATOM 8 O4' A A 30 -27.377 -35.203 41.509 1.00 39.15 O
ATOM 9 C3' A A 30 -25.103 -34.981 40.944 1.00 38.87 C
ATOM 10 O3' A A 30 -24.570 -34.286 42.074 1.00 38.80 O
ATOM 11 C2' A A 30 -25.406 -36.444 41.264 1.00 38.71 C
ATOM 12 O2' A A 30 -24.389 -37.091 42.005 1.00 38.48 O
ATOM 13 C1' A A 30 -26.663 -36.269 42.110 1.00 38.71 C
ATOM 14 N9 A A 30 -27.534 -37.440 42.181 1.00 38.62 N
ATOM 15 C8 A A 30 -27.881 -38.104 43.322 1.00 38.42 C
ATOM 16 N7 A A 30 -28.682 -39.122 43.123 1.00 38.70 N
ATOM 17 C5 A A 30 -28.874 -39.132 41.754 1.00 38.59 C
ATOM 18 C6 A A 30 -29.627 -39.973 40.908 1.00 38.55 C
ATOM 19 N6 A A 30 -30.346 -41.005 41.359 1.00 38.54 N
ATOM 20 N1 A A 30 -29.612 -39.714 39.580 1.00 38.66 N
ATOM 21 C2 A A 30 -28.887 -38.678 39.131 1.00 38.56 C
ATOM 22 N3 A A 30 -28.143 -37.817 39.831 1.00 38.55 N
ATOM 23 C4 A A 30 -28.175 -38.098 41.150 1.00 38.79 C
ATOM 24 P U A 31 -23.156 -33.539 42.023 1.00 38.25 P
ATOM 25 OP1 U A 31 -22.211 -34.364 41.242 1.00 38.40 O
ATOM 26 OP2 U A 31 -22.816 -33.130 43.403 1.00 39.01 O
ATOM 27 O5' U A 31 -23.471 -32.210 41.201 1.00 38.93 O
TER

ATOM 1 O3' A B 30 -24.570 -34.286 42.074 1.00 38.80 O
ATOM 2 P U B 31 -23.156 -33.539 42.023 1.00 38.25 P
ATOM 3 OP1 U B 31 -22.211 -34.364 41.242 1.00 38.40 O
ATOM 4 OP2 U B 31 -22.816 -33.130 43.403 1.00 39.01 O
ATOM 5 O5' U B 31 -23.471 -32.210 41.201 1.00 38.93 O
ATOM 6 C5' U B 31 -24.308 -31.183 41.722 1.00 39.43 C
ATOM 7 C4' U B 31 -24.442 -30.063 40.702 1.00 39.79 C
ATOM 8 O4' U B 31 -23.127 -29.610 40.286 1.00 39.86 O
ATOM 9 C3' U B 31 -25.175 -30.418 39.410 1.00 40.10 C
ATOM 10 O3' U B 31 -25.895 -29.274 38.928 1.00 41.19 O
ATOM 11 C2' U B 31 -24.029 -30.816 38.479 1.00 39.78 C
ATOM 12 O2' U B 31 -24.349 -30.706 37.108 1.00 38.98 O
ATOM 13 C1' U B 31 -22.979 -29.785 38.887 1.00 39.86 C
ATOM 14 N1 U B 31 -21.555 -30.158 38.606 1.00 39.85 N
ATOM 15 C2 U B 31 -20.848 -29.431 37.660 1.00 39.91 C
ATOM 16 O2 U B 31 -21.317 -28.498 37.031 1.00 39.91 O
ATOM 17 N3 U B 31 -19.545 -29.833 37.478 1.00 39.93 N
ATOM 18 C4 U B 31 -18.895 -30.867 38.130 1.00 39.74 C
ATOM 19 O4 U B 31 -17.726 -31.109 37.852 1.00 40.16 O
ATOM 20 C5 U B 31 -19.692 -31.579 39.099 1.00 39.55 C
ATOM 21 C6 U B 31 -20.963 -31.204 39.299 1.00 39.29 C
ATOM 22 P G B 32 -27.349 -28.901 39.495 1.00 41.83 P
ATOM 23 OP1 G B 32 -28.005 -28.031 38.493 1.00 42.11 O
ATOM 24 OP2 G B 32 -27.204 -28.414 40.887 1.00 42.07 O
ATOM 25 O5' G B 32 -28.071 -30.327 39.558 1.00 41.59 O
TER

Atoms:
OP1: (-25.690,-32.704,36.108)
OP2: (-25.991,-35.224,36.372)
C3': (-25.103,-34.981,40.944)
C1': (-26.663,-36.269,42.110)
C5': (-26.970,-34.580,39.197)
O4': (-27.377,-35.203,41.509)
C8: (-27.881,-38.104,43.322)
O2': (-24.389,-37.091,42.005)
C6: (-29.627,-39.973,40.908)
C5: (-28.874,-39.132,41.754)
C4: (-28.175,-38.098,41.150)
P: (-26.382,-33.844,36.743)
C4': (-26.497,-34.445,40.638)
C2': (-25.406,-36.444,41.264)
C2: (-28.887,-38.678,39.131)
N1: (-29.612,-39.714,39.580)
N3: (-28.143,-37.817,39.831)
N6: (-30.346,-41.005,41.359)
N7: (-28.682,-39.122,43.123)
N9: (-27.534,-37.440,42.181)
O5': (-26.256,-33.702,38.332)
O3': (-24.570,-34.286,42.074)
C4: (-18.895,-30.867,38.130)
N3: (-19.545,-29.833,37.478)
OP1: (-22.211,-34.364,41.242)
OP2: (-22.816,-33.130,43.403)
C2: (-20.848,-29.431,37.660)
C1': (-22.979,-29.785,38.887)
C3': (-25.175,-30.418,39.410)
O5': (-23.471,-32.210,41.201)
O4': (-23.127,-29.610,40.286)
C5': (-24.308,-31.183,41.722)
P: (-23.156,-33.539,42.023)
C4': (-24.442,-30.063,40.702)
C2': (-24.029,-30.816,38.479)
O2': (-24.349,-30.706,37.108)
N1: (-21.555,-30.158,38.606)
O4: (-17.726,-31.109,37.852)
O2: (-21.317,-28.498,37.031)
C6: (-20.963,-31.204,39.299)
C5: (-19.692,-31.579,39.099)
O3': (-25.895,-29.274,38.928)
Image (generated by PyMOL):
PyMOL image
show in jmol