ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:0316:0317

Extra

PDB:
ATOM 1 O3' A A 315 15.079 127.199 20.818 1.00 64.73 O
ATOM 2 P U A 316 14.620 126.530 19.434 1.00 63.31 P
ATOM 3 OP1 U A 316 14.630 127.605 18.416 1.00 64.77 O
ATOM 4 OP2 U A 316 13.375 125.761 19.670 1.00 62.20 O
ATOM 5 O5' U A 316 15.802 125.517 19.098 1.00 60.84 O
ATOM 6 C5' U A 316 16.029 124.372 19.929 1.00 61.10 C
ATOM 7 C4' U A 316 17.498 124.232 20.257 1.00 61.92 C
ATOM 8 O4' U A 316 18.227 123.804 19.075 1.00 62.44 O
ATOM 9 C3' U A 316 18.220 125.469 20.793 1.00 62.14 C
ATOM 10 O3' U A 316 19.150 125.078 21.802 1.00 61.22 O
ATOM 11 C2' U A 316 18.976 125.971 19.565 1.00 62.99 C
ATOM 12 O2' U A 316 20.143 126.693 19.896 1.00 62.66 O
ATOM 13 C1' U A 316 19.332 124.657 18.865 1.00 62.93 C
ATOM 14 N1 U A 316 19.565 124.759 17.413 1.00 63.97 N
ATOM 15 C2 U A 316 20.707 124.165 16.891 1.00 64.89 C
ATOM 16 O2 U A 316 21.525 123.571 17.573 1.00 66.86 O
ATOM 17 N3 U A 316 20.859 124.291 15.535 1.00 65.75 N
ATOM 18 C4 U A 316 20.016 124.940 14.658 1.00 66.70 C
ATOM 19 O4 U A 316 20.295 124.970 13.458 1.00 66.99 O
ATOM 20 C5 U A 316 18.864 125.530 15.267 1.00 66.30 C
ATOM 21 C6 U A 316 18.681 125.421 16.589 1.00 65.39 C
ATOM 22 P A A 317 18.674 124.996 23.337 1.00 59.92 P
ATOM 23 OP1 A A 317 19.532 123.975 23.990 1.00 59.61 O
ATOM 24 OP2 A A 317 17.195 124.836 23.356 1.00 59.06 O
ATOM 25 O5' A A 317 18.986 126.436 23.951 1.00 59.62 O
TER

ATOM 1 O3' U B 316 19.150 125.078 21.802 1.00 61.22 O
ATOM 2 P A B 317 18.674 124.996 23.337 1.00 59.92 P
ATOM 3 OP1 A B 317 19.532 123.975 23.990 1.00 59.61 O
ATOM 4 OP2 A B 317 17.195 124.836 23.356 1.00 59.06 O
ATOM 5 O5' A B 317 18.986 126.436 23.951 1.00 59.62 O
ATOM 6 C5' A B 317 20.130 126.657 24.798 1.00 57.29 C
ATOM 7 C4' A B 317 20.092 128.045 25.393 1.00 55.83 C
ATOM 8 O4' A B 317 19.982 129.009 24.312 1.00 56.63 O
ATOM 9 C3' A B 317 18.940 128.355 26.348 1.00 55.94 C
ATOM 10 O3' A B 317 19.350 129.366 27.288 1.00 56.71 O
ATOM 11 C2' A B 317 17.929 129.007 25.416 1.00 56.39 C
ATOM 12 O2' A B 317 17.024 129.854 26.088 1.00 56.06 O
ATOM 13 C1' A B 317 18.861 129.832 24.537 1.00 57.97 C
ATOM 14 N9 A B 317 18.336 130.279 23.247 1.00 61.94 N
ATOM 15 C8 A B 317 17.578 129.597 22.324 1.00 62.06 C
ATOM 16 N7 A B 317 17.267 130.307 21.269 1.00 63.40 N
ATOM 17 C5 A B 317 17.864 131.539 21.507 1.00 64.55 C
ATOM 18 C6 A B 317 17.910 132.735 20.763 1.00 63.90 C
ATOM 19 N6 A B 317 17.320 132.897 19.579 1.00 62.53 N
ATOM 20 N1 A B 317 18.594 133.774 21.288 1.00 64.94 N
ATOM 21 C2 A B 317 19.188 133.618 22.477 1.00 64.84 C
ATOM 22 N3 A B 317 19.215 132.552 23.270 1.00 65.21 N
ATOM 23 C4 A B 317 18.527 131.534 22.721 1.00 64.50 C
ATOM 24 P C B 318 20.218 128.977 28.593 1.00 54.81 P
ATOM 25 OP1 C B 318 20.202 130.180 29.460 1.00 53.68 O
ATOM 26 OP2 C B 318 21.521 128.386 28.171 1.00 50.02 O
ATOM 27 O5' C B 318 19.362 127.851 29.327 1.00 54.12 O
TER

Atoms:
C4: (20.016,124.940,14.658)
N3: (20.859,124.291,15.535)
OP1: (14.630,127.605,18.416)
OP2: (13.375,125.761,19.670)
C2: (20.707,124.165,16.891)
C1': (19.332,124.657,18.865)
C3': (18.220,125.469,20.793)
O5': (15.802,125.517,19.098)
O4': (18.227,123.804,19.075)
C5': (16.029,124.372,19.929)
P: (14.620,126.530,19.434)
C4': (17.498,124.232,20.257)
C2': (18.976,125.971,19.565)
O2': (20.143,126.693,19.896)
N1: (19.565,124.759,17.413)
O4: (20.295,124.970,13.458)
O2: (21.525,123.571,17.573)
C6: (18.681,125.421,16.589)
C5: (18.864,125.530,15.267)
O3': (19.150,125.078,21.802)
OP1: (19.532,123.975,23.990)
OP2: (17.195,124.836,23.356)
C3': (18.940,128.355,26.348)
C1': (18.861,129.832,24.537)
C5': (20.130,126.657,24.798)
O4': (19.982,129.009,24.312)
C8: (17.578,129.597,22.324)
O2': (17.024,129.854,26.088)
C6: (17.910,132.735,20.763)
C5: (17.864,131.539,21.507)
C4: (18.527,131.534,22.721)
P: (18.674,124.996,23.337)
C4': (20.092,128.045,25.393)
C2': (17.929,129.007,25.416)
C2: (19.188,133.618,22.477)
N1: (18.594,133.774,21.288)
N3: (19.215,132.552,23.270)
N6: (17.320,132.897,19.579)
N7: (17.267,130.307,21.269)
N9: (18.336,130.279,23.247)
O5': (18.986,126.436,23.951)
O3': (19.350,129.366,27.288)
Image (generated by PyMOL):
PyMOL image
show in jmol