ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ7:0316:0317

Extra

PDB:
ATOM 1 O3' A A 315 14.484 126.587 20.532 1.00 56.03 O
ATOM 2 P U A 316 14.035 126.055 19.090 1.00 54.87 P
ATOM 3 OP1 U A 316 14.130 127.223 18.188 1.00 57.46 O
ATOM 4 OP2 U A 316 12.749 125.318 19.204 1.00 54.34 O
ATOM 5 O5' U A 316 15.179 125.021 18.709 1.00 53.50 O
ATOM 6 C5' U A 316 15.413 123.881 19.536 1.00 52.95 C
ATOM 7 C4' U A 316 16.877 123.759 19.870 1.00 54.96 C
ATOM 8 O4' U A 316 17.597 123.278 18.704 1.00 55.17 O
ATOM 9 C3' U A 316 17.596 125.025 20.347 1.00 55.99 C
ATOM 10 O3' U A 316 18.535 124.701 21.380 1.00 56.20 O
ATOM 11 C2' U A 316 18.347 125.464 19.087 1.00 56.27 C
ATOM 12 O2' U A 316 19.525 126.188 19.368 1.00 56.33 O
ATOM 13 C1' U A 316 18.703 124.119 18.454 1.00 56.45 C
ATOM 14 N1 U A 316 18.943 124.148 17.001 1.00 56.88 N
ATOM 15 C2 U A 316 20.131 123.609 16.531 1.00 58.20 C
ATOM 16 O2 U A 316 20.978 123.119 17.258 1.00 59.46 O
ATOM 17 N3 U A 316 20.290 123.656 15.169 1.00 59.67 N
ATOM 18 C4 U A 316 19.403 124.164 14.244 1.00 60.30 C
ATOM 19 O4 U A 316 19.670 124.082 13.040 1.00 61.86 O
ATOM 20 C5 U A 316 18.203 124.706 14.804 1.00 59.15 C
ATOM 21 C6 U A 316 18.019 124.682 16.129 1.00 58.39 C
ATOM 22 P A A 317 18.037 124.555 22.907 1.00 53.39 P
ATOM 23 OP1 A A 317 18.907 123.519 23.516 1.00 54.58 O
ATOM 24 OP2 A A 317 16.569 124.378 22.927 1.00 54.96 O
ATOM 25 O5' A A 317 18.323 125.970 23.585 1.00 54.48 O
TER

ATOM 1 O3' U B 316 18.535 124.701 21.380 1.00 56.20 O
ATOM 2 P A B 317 18.037 124.555 22.907 1.00 53.39 P
ATOM 3 OP1 A B 317 18.907 123.519 23.516 1.00 54.58 O
ATOM 4 OP2 A B 317 16.569 124.378 22.927 1.00 54.96 O
ATOM 5 O5' A B 317 18.323 125.970 23.585 1.00 54.48 O
ATOM 6 C5' A B 317 19.511 126.197 24.370 1.00 53.98 C
ATOM 7 C4' A B 317 19.492 127.583 24.975 1.00 53.29 C
ATOM 8 O4' A B 317 19.391 128.564 23.905 1.00 54.17 O
ATOM 9 C3' A B 317 18.346 127.892 25.935 1.00 52.12 C
ATOM 10 O3' A B 317 18.756 128.881 26.890 1.00 52.41 O
ATOM 11 C2' A B 317 17.334 128.558 25.015 1.00 53.08 C
ATOM 12 O2' A B 317 16.441 129.395 25.715 1.00 52.08 O
ATOM 13 C1' A B 317 18.263 129.382 24.126 1.00 55.57 C
ATOM 14 N9 A B 317 17.727 129.786 22.829 1.00 58.90 N
ATOM 15 C8 A B 317 16.999 129.052 21.921 1.00 59.19 C
ATOM 16 N7 A B 317 16.689 129.715 20.834 1.00 60.35 N
ATOM 17 C5 A B 317 17.245 130.971 21.040 1.00 61.43 C
ATOM 18 C6 A B 317 17.270 132.136 20.255 1.00 60.49 C
ATOM 19 N6 A B 317 16.699 132.232 19.056 1.00 61.25 N
ATOM 20 N1 A B 317 17.911 133.215 20.753 1.00 60.28 N
ATOM 21 C2 A B 317 18.483 133.121 21.954 1.00 60.47 C
ATOM 22 N3 A B 317 18.528 132.085 22.787 1.00 61.11 N
ATOM 23 C4 A B 317 17.884 131.028 22.265 1.00 60.81 C
ATOM 24 P C B 318 19.578 128.455 28.207 1.00 50.08 P
ATOM 25 OP1 C B 318 19.646 129.645 29.080 1.00 48.62 O
ATOM 26 OP2 C B 318 20.831 127.776 27.773 1.00 47.13 O
ATOM 27 O5' C B 318 18.663 127.381 28.946 1.00 51.82 O
TER

Atoms:
C4: (19.403,124.164,14.244)
N3: (20.290,123.656,15.169)
OP1: (14.130,127.223,18.188)
OP2: (12.749,125.318,19.204)
C2: (20.131,123.609,16.531)
C1': (18.703,124.119,18.454)
C3': (17.596,125.025,20.347)
O5': (15.179,125.021,18.709)
O4': (17.597,123.278,18.704)
C5': (15.413,123.881,19.536)
P: (14.035,126.055,19.090)
C4': (16.877,123.759,19.870)
C2': (18.347,125.464,19.087)
O2': (19.525,126.188,19.368)
N1: (18.943,124.148,17.001)
O4: (19.670,124.082,13.040)
O2: (20.978,123.119,17.258)
C6: (18.019,124.682,16.129)
C5: (18.203,124.706,14.804)
O3': (18.535,124.701,21.380)
OP1: (18.907,123.519,23.516)
OP2: (16.569,124.378,22.927)
C3': (18.346,127.892,25.935)
C1': (18.263,129.382,24.126)
C5': (19.511,126.197,24.370)
O4': (19.391,128.564,23.905)
C8: (16.999,129.052,21.921)
O2': (16.441,129.395,25.715)
C6: (17.270,132.136,20.255)
C5: (17.245,130.971,21.040)
C4: (17.884,131.028,22.265)
P: (18.037,124.555,22.907)
C4': (19.492,127.583,24.975)
C2': (17.334,128.558,25.015)
C2: (18.483,133.121,21.954)
N1: (17.911,133.215,20.753)
N3: (18.528,132.085,22.787)
N6: (16.699,132.232,19.056)
N7: (16.689,129.715,20.834)
N9: (17.727,129.786,22.829)
O5': (18.323,125.970,23.585)
O3': (18.756,128.881,26.890)
Image (generated by PyMOL):
PyMOL image
show in jmol