Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0316:0317
Extra
PDB:
ATOM 1 O3' A A 315 15.074 126.698 20.647 1.00 53.06 O
ATOM 2 P U A 316 14.661 126.203 19.187 1.00 51.78 P
ATOM 3 OP1 U A 316 14.795 127.374 18.292 1.00 52.74 O
ATOM 4 OP2 U A 316 13.361 125.505 19.307 1.00 50.75 O
ATOM 5 O5' U A 316 15.779 125.144 18.802 1.00 51.77 O
ATOM 6 C5' U A 316 15.987 123.989 19.615 1.00 53.25 C
ATOM 7 C4' U A 316 17.449 123.850 19.958 1.00 55.23 C
ATOM 8 O4' U A 316 18.179 123.456 18.767 1.00 55.47 O
ATOM 9 C3' U A 316 18.147 125.092 20.505 1.00 55.55 C
ATOM 10 O3' U A 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 11 C2' U A 316 18.871 125.631 19.273 1.00 56.29 C
ATOM 12 O2' U A 316 20.025 126.375 19.601 1.00 58.24 O
ATOM 13 C1' U A 316 19.257 124.340 18.552 1.00 56.96 C
ATOM 14 N1 U A 316 19.461 124.456 17.097 1.00 58.52 N
ATOM 15 C2 U A 316 20.599 123.878 16.537 1.00 59.15 C
ATOM 16 O2 U A 316 21.455 123.305 17.188 1.00 59.32 O
ATOM 17 N3 U A 316 20.697 123.998 15.177 1.00 60.93 N
ATOM 18 C4 U A 316 19.808 124.626 14.331 1.00 63.34 C
ATOM 19 O4 U A 316 20.037 124.651 13.119 1.00 66.95 O
ATOM 20 C5 U A 316 18.675 125.205 14.980 1.00 62.70 C
ATOM 21 C6 U A 316 18.544 125.104 16.304 1.00 60.65 C
ATOM 22 P A A 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 23 OP1 A A 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 24 OP2 A A 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 25 O5' A A 317 18.899 126.075 23.660 1.00 54.80 O
TER
ATOM 1 O3' U B 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 2 P A B 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 3 OP1 A B 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 4 OP2 A B 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 5 O5' A B 317 18.899 126.075 23.660 1.00 54.80 O
ATOM 6 C5' A B 317 20.086 126.328 24.439 1.00 53.74 C
ATOM 7 C4' A B 317 20.058 127.719 25.028 1.00 52.01 C
ATOM 8 O4' A B 317 19.958 128.683 23.945 1.00 52.44 O
ATOM 9 C3' A B 317 18.907 128.033 25.981 1.00 51.49 C
ATOM 10 O3' A B 317 19.315 129.025 26.937 1.00 52.91 O
ATOM 11 C2' A B 317 17.907 128.703 25.048 1.00 51.35 C
ATOM 12 O2' A B 317 17.010 129.556 25.725 1.00 50.11 O
ATOM 13 C1' A B 317 18.849 129.522 24.172 1.00 52.75 C
ATOM 14 N9 A B 317 18.323 129.977 22.883 1.00 55.40 N
ATOM 15 C8 A B 317 17.571 129.288 21.960 1.00 56.01 C
ATOM 16 N7 A B 317 17.241 130.000 20.910 1.00 56.10 N
ATOM 17 C5 A B 317 17.818 131.241 21.152 1.00 56.21 C
ATOM 18 C6 A B 317 17.835 132.440 20.415 1.00 55.45 C
ATOM 19 N6 A B 317 17.233 132.596 19.234 1.00 53.70 N
ATOM 20 N1 A B 317 18.504 133.489 20.940 1.00 55.66 N
ATOM 21 C2 A B 317 19.114 133.334 22.121 1.00 55.78 C
ATOM 22 N3 A B 317 19.171 132.264 22.906 1.00 55.97 N
ATOM 23 C4 A B 317 18.494 131.238 22.360 1.00 56.42 C
ATOM 24 P C B 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 25 OP1 C B 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 26 OP2 C B 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 27 O5' C B 318 19.160 127.523 29.006 1.00 52.32 O
TER
ATOM 2 P U A 316 14.661 126.203 19.187 1.00 51.78 P
ATOM 3 OP1 U A 316 14.795 127.374 18.292 1.00 52.74 O
ATOM 4 OP2 U A 316 13.361 125.505 19.307 1.00 50.75 O
ATOM 5 O5' U A 316 15.779 125.144 18.802 1.00 51.77 O
ATOM 6 C5' U A 316 15.987 123.989 19.615 1.00 53.25 C
ATOM 7 C4' U A 316 17.449 123.850 19.958 1.00 55.23 C
ATOM 8 O4' U A 316 18.179 123.456 18.767 1.00 55.47 O
ATOM 9 C3' U A 316 18.147 125.092 20.505 1.00 55.55 C
ATOM 10 O3' U A 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 11 C2' U A 316 18.871 125.631 19.273 1.00 56.29 C
ATOM 12 O2' U A 316 20.025 126.375 19.601 1.00 58.24 O
ATOM 13 C1' U A 316 19.257 124.340 18.552 1.00 56.96 C
ATOM 14 N1 U A 316 19.461 124.456 17.097 1.00 58.52 N
ATOM 15 C2 U A 316 20.599 123.878 16.537 1.00 59.15 C
ATOM 16 O2 U A 316 21.455 123.305 17.188 1.00 59.32 O
ATOM 17 N3 U A 316 20.697 123.998 15.177 1.00 60.93 N
ATOM 18 C4 U A 316 19.808 124.626 14.331 1.00 63.34 C
ATOM 19 O4 U A 316 20.037 124.651 13.119 1.00 66.95 O
ATOM 20 C5 U A 316 18.675 125.205 14.980 1.00 62.70 C
ATOM 21 C6 U A 316 18.544 125.104 16.304 1.00 60.65 C
ATOM 22 P A A 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 23 OP1 A A 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 24 OP2 A A 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 25 O5' A A 317 18.899 126.075 23.660 1.00 54.80 O
TER
ATOM 1 O3' U B 316 19.083 124.707 21.512 1.00 55.08 O
ATOM 2 P A B 317 18.610 124.627 23.051 1.00 56.28 P
ATOM 3 OP1 A B 317 19.475 123.618 23.717 1.00 53.30 O
ATOM 4 OP2 A B 317 17.134 124.452 23.066 1.00 55.62 O
ATOM 5 O5' A B 317 18.899 126.075 23.660 1.00 54.80 O
ATOM 6 C5' A B 317 20.086 126.328 24.439 1.00 53.74 C
ATOM 7 C4' A B 317 20.058 127.719 25.028 1.00 52.01 C
ATOM 8 O4' A B 317 19.958 128.683 23.945 1.00 52.44 O
ATOM 9 C3' A B 317 18.907 128.033 25.981 1.00 51.49 C
ATOM 10 O3' A B 317 19.315 129.025 26.937 1.00 52.91 O
ATOM 11 C2' A B 317 17.907 128.703 25.048 1.00 51.35 C
ATOM 12 O2' A B 317 17.010 129.556 25.725 1.00 50.11 O
ATOM 13 C1' A B 317 18.849 129.522 24.172 1.00 52.75 C
ATOM 14 N9 A B 317 18.323 129.977 22.883 1.00 55.40 N
ATOM 15 C8 A B 317 17.571 129.288 21.960 1.00 56.01 C
ATOM 16 N7 A B 317 17.241 130.000 20.910 1.00 56.10 N
ATOM 17 C5 A B 317 17.818 131.241 21.152 1.00 56.21 C
ATOM 18 C6 A B 317 17.835 132.440 20.415 1.00 55.45 C
ATOM 19 N6 A B 317 17.233 132.596 19.234 1.00 53.70 N
ATOM 20 N1 A B 317 18.504 133.489 20.940 1.00 55.66 N
ATOM 21 C2 A B 317 19.114 133.334 22.121 1.00 55.78 C
ATOM 22 N3 A B 317 19.171 132.264 22.906 1.00 55.97 N
ATOM 23 C4 A B 317 18.494 131.238 22.360 1.00 56.42 C
ATOM 24 P C B 318 20.086 128.602 28.290 1.00 52.43 P
ATOM 25 OP1 C B 318 20.087 129.798 29.168 1.00 50.18 O
ATOM 26 OP2 C B 318 21.376 127.949 27.911 1.00 50.72 O
ATOM 27 O5' C B 318 19.160 127.523 29.006 1.00 52.32 O
TER
Atoms:
C4: (19.808,124.626,14.331)
N3: (20.697,123.998,15.177)
OP1: (14.795,127.374,18.292)
OP2: (13.361,125.505,19.307)
C2: (20.599,123.878,16.537)
C1': (19.257,124.340,18.552)
C3': (18.147,125.092,20.505)
O5': (15.779,125.144,18.802)
O4': (18.179,123.456,18.767)
C5': (15.987,123.989,19.615)
P: (14.661,126.203,19.187)
C4': (17.449,123.850,19.958)
C2': (18.871,125.631,19.273)
O2': (20.025,126.375,19.601)
N1: (19.461,124.456,17.097)
O4: (20.037,124.651,13.119)
O2: (21.455,123.305,17.188)
C6: (18.544,125.104,16.304)
C5: (18.675,125.205,14.980)
O3': (19.083,124.707,21.512)
N3: (20.697,123.998,15.177)
OP1: (14.795,127.374,18.292)
OP2: (13.361,125.505,19.307)
C2: (20.599,123.878,16.537)
C1': (19.257,124.340,18.552)
C3': (18.147,125.092,20.505)
O5': (15.779,125.144,18.802)
O4': (18.179,123.456,18.767)
C5': (15.987,123.989,19.615)
P: (14.661,126.203,19.187)
C4': (17.449,123.850,19.958)
C2': (18.871,125.631,19.273)
O2': (20.025,126.375,19.601)
N1: (19.461,124.456,17.097)
O4: (20.037,124.651,13.119)
O2: (21.455,123.305,17.188)
C6: (18.544,125.104,16.304)
C5: (18.675,125.205,14.980)
O3': (19.083,124.707,21.512)
OP1: (19.475,123.618,23.717)
OP2: (17.134,124.452,23.066)
C3': (18.907,128.033,25.981)
C1': (18.849,129.522,24.172)
C5': (20.086,126.328,24.439)
O4': (19.958,128.683,23.945)
C8: (17.571,129.288,21.960)
O2': (17.010,129.556,25.725)
C6: (17.835,132.440,20.415)
C5: (17.818,131.241,21.152)
C4: (18.494,131.238,22.360)
P: (18.610,124.627,23.051)
C4': (20.058,127.719,25.028)
C2': (17.907,128.703,25.048)
C2: (19.114,133.334,22.121)
N1: (18.504,133.489,20.940)
N3: (19.171,132.264,22.906)
N6: (17.233,132.596,19.234)
N7: (17.241,130.000,20.910)
N9: (18.323,129.977,22.883)
O5': (18.899,126.075,23.660)
O3': (19.315,129.025,26.937)
OP2: (17.134,124.452,23.066)
C3': (18.907,128.033,25.981)
C1': (18.849,129.522,24.172)
C5': (20.086,126.328,24.439)
O4': (19.958,128.683,23.945)
C8: (17.571,129.288,21.960)
O2': (17.010,129.556,25.725)
C6: (17.835,132.440,20.415)
C5: (17.818,131.241,21.152)
C4: (18.494,131.238,22.360)
P: (18.610,124.627,23.051)
C4': (20.058,127.719,25.028)
C2': (17.907,128.703,25.048)
C2: (19.114,133.334,22.121)
N1: (18.504,133.489,20.940)
N3: (19.171,132.264,22.906)
N6: (17.233,132.596,19.234)
N7: (17.241,130.000,20.910)
N9: (18.323,129.977,22.883)
O5': (18.899,126.075,23.660)
O3': (19.315,129.025,26.937)
Image (generated by PyMOL):