Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y9H:F8:F9
Extra
PDB:
ATOM 1 O3' G A 7 -33.561 1.563 21.114 1.00 54.70 O
ATOM 2 P C A 8 -33.715 1.743 22.719 1.00 61.28 P
ATOM 3 OP1 C A 8 -32.677 2.696 23.153 1.00 56.68 O
ATOM 4 OP2 C A 8 -33.723 0.387 23.315 1.00 71.79 O
ATOM 5 O5' C A 8 -35.158 2.404 22.871 1.00 59.88 O
ATOM 6 C5' C A 8 -36.286 1.619 23.250 1.00 60.47 C
ATOM 7 C4' C A 8 -37.522 2.463 23.473 1.00 59.37 C
ATOM 8 O4' C A 8 -37.244 3.471 24.491 1.00 60.62 O
ATOM 9 C3' C A 8 -38.027 3.230 22.255 1.00 56.48 C
ATOM 10 O3' C A 8 -39.446 3.394 22.374 1.00 55.01 O
ATOM 11 C2' C A 8 -37.342 4.589 22.433 1.00 56.57 C
ATOM 12 O2' C A 8 -37.951 5.657 21.740 1.00 58.78 O
ATOM 13 C1' C A 8 -37.437 4.766 23.946 1.00 56.46 C
ATOM 14 N1 C A 8 -36.415 5.666 24.533 1.00 55.30 N
ATOM 15 C2 C A 8 -36.855 6.831 25.185 1.00 54.91 C
ATOM 16 O2 C A 8 -38.075 7.076 25.207 1.00 52.74 O
ATOM 17 N3 C A 8 -35.944 7.653 25.768 1.00 44.71 N
ATOM 18 C4 C A 8 -34.642 7.342 25.708 1.00 49.08 C
ATOM 19 N4 C A 8 -33.764 8.170 26.285 1.00 49.40 N
ATOM 20 C5 C A 8 -34.169 6.159 25.061 1.00 46.17 C
ATOM 21 C6 C A 8 -35.080 5.352 24.504 1.00 47.02 C
ATOM 22 P G A 9 -40.458 2.555 21.451 1.00 55.77 P
ATOM 23 OP1 G A 9 -41.778 2.601 22.112 1.00 61.96 O
ATOM 24 OP2 G A 9 -39.831 1.234 21.192 1.00 58.14 O
ATOM 25 O5' G A 9 -40.498 3.410 20.111 1.00 70.66 O
TER
ATOM 1 O3' C B 8 -39.446 3.394 22.374 1.00 55.01 O
ATOM 2 P G B 9 -40.458 2.555 21.451 1.00 55.77 P
ATOM 3 OP1 G B 9 -41.778 2.601 22.112 1.00 61.96 O
ATOM 4 OP2 G B 9 -39.831 1.234 21.192 1.00 58.14 O
ATOM 5 O5' G B 9 -40.498 3.410 20.111 1.00 70.66 O
ATOM 6 C5' G B 9 -41.685 4.088 19.698 1.00 62.58 C
ATOM 7 C4' G B 9 -42.158 3.578 18.362 1.00 56.15 C
ATOM 8 O4' G B 9 -41.441 4.283 17.316 1.00 50.79 O
ATOM 9 C3' G B 9 -41.911 2.100 18.158 1.00 50.61 C
ATOM 10 O3' G B 9 -43.088 1.425 17.679 1.00 61.04 O
ATOM 11 C2' G B 9 -40.716 2.006 17.187 1.00 44.15 C
ATOM 12 O2' G B 9 -40.834 1.023 16.183 1.00 40.31 O
ATOM 13 C1' G B 9 -40.576 3.420 16.593 1.00 52.43 C
ATOM 14 N9 G B 9 -39.211 3.972 16.723 1.00 58.61 N
ATOM 15 C8 G B 9 -38.486 3.842 17.889 1.00 56.91 C
ATOM 16 N7 G B 9 -37.313 4.399 17.865 1.00 52.28 N
ATOM 17 C5 G B 9 -37.232 4.956 16.598 1.00 56.96 C
ATOM 18 C6 G B 9 -36.169 5.700 16.005 1.00 51.62 C
ATOM 19 O6 G B 9 -35.073 6.024 16.481 1.00 37.67 O
ATOM 20 N1 G B 9 -36.466 6.089 14.708 1.00 52.26 N
ATOM 21 C2 G B 9 -37.630 5.810 14.067 1.00 52.67 C
ATOM 22 N2 G B 9 -37.682 6.278 12.817 1.00 50.28 N
ATOM 23 N3 G B 9 -38.633 5.121 14.604 1.00 61.19 N
ATOM 24 C4 G B 9 -38.388 4.713 15.873 1.00 58.77 C
ATOM 25 P U B 10 -43.870 1.836 16.332 1.00 60.73 P
ATOM 26 OP1 U B 10 -45.019 2.682 16.720 1.00 49.34 O
ATOM 27 OP2 U B 10 -42.875 2.368 15.375 1.00 70.21 O
ATOM 28 O5' U B 10 -44.387 0.416 15.844 1.00 62.65 O
TER
ATOM 2 P C A 8 -33.715 1.743 22.719 1.00 61.28 P
ATOM 3 OP1 C A 8 -32.677 2.696 23.153 1.00 56.68 O
ATOM 4 OP2 C A 8 -33.723 0.387 23.315 1.00 71.79 O
ATOM 5 O5' C A 8 -35.158 2.404 22.871 1.00 59.88 O
ATOM 6 C5' C A 8 -36.286 1.619 23.250 1.00 60.47 C
ATOM 7 C4' C A 8 -37.522 2.463 23.473 1.00 59.37 C
ATOM 8 O4' C A 8 -37.244 3.471 24.491 1.00 60.62 O
ATOM 9 C3' C A 8 -38.027 3.230 22.255 1.00 56.48 C
ATOM 10 O3' C A 8 -39.446 3.394 22.374 1.00 55.01 O
ATOM 11 C2' C A 8 -37.342 4.589 22.433 1.00 56.57 C
ATOM 12 O2' C A 8 -37.951 5.657 21.740 1.00 58.78 O
ATOM 13 C1' C A 8 -37.437 4.766 23.946 1.00 56.46 C
ATOM 14 N1 C A 8 -36.415 5.666 24.533 1.00 55.30 N
ATOM 15 C2 C A 8 -36.855 6.831 25.185 1.00 54.91 C
ATOM 16 O2 C A 8 -38.075 7.076 25.207 1.00 52.74 O
ATOM 17 N3 C A 8 -35.944 7.653 25.768 1.00 44.71 N
ATOM 18 C4 C A 8 -34.642 7.342 25.708 1.00 49.08 C
ATOM 19 N4 C A 8 -33.764 8.170 26.285 1.00 49.40 N
ATOM 20 C5 C A 8 -34.169 6.159 25.061 1.00 46.17 C
ATOM 21 C6 C A 8 -35.080 5.352 24.504 1.00 47.02 C
ATOM 22 P G A 9 -40.458 2.555 21.451 1.00 55.77 P
ATOM 23 OP1 G A 9 -41.778 2.601 22.112 1.00 61.96 O
ATOM 24 OP2 G A 9 -39.831 1.234 21.192 1.00 58.14 O
ATOM 25 O5' G A 9 -40.498 3.410 20.111 1.00 70.66 O
TER
ATOM 1 O3' C B 8 -39.446 3.394 22.374 1.00 55.01 O
ATOM 2 P G B 9 -40.458 2.555 21.451 1.00 55.77 P
ATOM 3 OP1 G B 9 -41.778 2.601 22.112 1.00 61.96 O
ATOM 4 OP2 G B 9 -39.831 1.234 21.192 1.00 58.14 O
ATOM 5 O5' G B 9 -40.498 3.410 20.111 1.00 70.66 O
ATOM 6 C5' G B 9 -41.685 4.088 19.698 1.00 62.58 C
ATOM 7 C4' G B 9 -42.158 3.578 18.362 1.00 56.15 C
ATOM 8 O4' G B 9 -41.441 4.283 17.316 1.00 50.79 O
ATOM 9 C3' G B 9 -41.911 2.100 18.158 1.00 50.61 C
ATOM 10 O3' G B 9 -43.088 1.425 17.679 1.00 61.04 O
ATOM 11 C2' G B 9 -40.716 2.006 17.187 1.00 44.15 C
ATOM 12 O2' G B 9 -40.834 1.023 16.183 1.00 40.31 O
ATOM 13 C1' G B 9 -40.576 3.420 16.593 1.00 52.43 C
ATOM 14 N9 G B 9 -39.211 3.972 16.723 1.00 58.61 N
ATOM 15 C8 G B 9 -38.486 3.842 17.889 1.00 56.91 C
ATOM 16 N7 G B 9 -37.313 4.399 17.865 1.00 52.28 N
ATOM 17 C5 G B 9 -37.232 4.956 16.598 1.00 56.96 C
ATOM 18 C6 G B 9 -36.169 5.700 16.005 1.00 51.62 C
ATOM 19 O6 G B 9 -35.073 6.024 16.481 1.00 37.67 O
ATOM 20 N1 G B 9 -36.466 6.089 14.708 1.00 52.26 N
ATOM 21 C2 G B 9 -37.630 5.810 14.067 1.00 52.67 C
ATOM 22 N2 G B 9 -37.682 6.278 12.817 1.00 50.28 N
ATOM 23 N3 G B 9 -38.633 5.121 14.604 1.00 61.19 N
ATOM 24 C4 G B 9 -38.388 4.713 15.873 1.00 58.77 C
ATOM 25 P U B 10 -43.870 1.836 16.332 1.00 60.73 P
ATOM 26 OP1 U B 10 -45.019 2.682 16.720 1.00 49.34 O
ATOM 27 OP2 U B 10 -42.875 2.368 15.375 1.00 70.21 O
ATOM 28 O5' U B 10 -44.387 0.416 15.844 1.00 62.65 O
TER
Atoms:
C2: (-36.855,6.831,25.185)
OP1: (-32.677,2.696,23.153)
OP2: (-33.723,0.387,23.315)
C4: (-34.642,7.342,25.708)
O5': (-35.158,2.404,22.871)
C3': (-38.027,3.230,22.255)
C1': (-37.437,4.766,23.946)
O4': (-37.244,3.471,24.491)
C5': (-36.286,1.619,23.250)
P: (-33.715,1.743,22.719)
O2: (-38.075,7.076,25.207)
C4': (-37.522,2.463,23.473)
C2': (-37.342,4.589,22.433)
O2': (-37.951,5.657,21.740)
N1: (-36.415,5.666,24.533)
N3: (-35.944,7.653,25.768)
N4: (-33.764,8.170,26.285)
C6: (-35.080,5.352,24.504)
C5: (-34.169,6.159,25.061)
O3': (-39.446,3.394,22.374)
OP1: (-32.677,2.696,23.153)
OP2: (-33.723,0.387,23.315)
C4: (-34.642,7.342,25.708)
O5': (-35.158,2.404,22.871)
C3': (-38.027,3.230,22.255)
C1': (-37.437,4.766,23.946)
O4': (-37.244,3.471,24.491)
C5': (-36.286,1.619,23.250)
P: (-33.715,1.743,22.719)
O2: (-38.075,7.076,25.207)
C4': (-37.522,2.463,23.473)
C2': (-37.342,4.589,22.433)
O2': (-37.951,5.657,21.740)
N1: (-36.415,5.666,24.533)
N3: (-35.944,7.653,25.768)
N4: (-33.764,8.170,26.285)
C6: (-35.080,5.352,24.504)
C5: (-34.169,6.159,25.061)
O3': (-39.446,3.394,22.374)
OP1: (-41.778,2.601,22.112)
OP2: (-39.831,1.234,21.192)
C3': (-41.911,2.100,18.158)
C1': (-40.576,3.420,16.593)
C5': (-41.685,4.088,19.698)
O6: (-35.073,6.024,16.481)
O4': (-41.441,4.283,17.316)
C8: (-38.486,3.842,17.889)
C2: (-37.630,5.810,14.067)
C6: (-36.169,5.700,16.005)
C5: (-37.232,4.956,16.598)
C4: (-38.388,4.713,15.873)
P: (-40.458,2.555,21.451)
C4': (-42.158,3.578,18.362)
C2': (-40.716,2.006,17.187)
O2': (-40.834,1.023,16.183)
N1: (-36.466,6.089,14.708)
N2: (-37.682,6.278,12.817)
N3: (-38.633,5.121,14.604)
N7: (-37.313,4.399,17.865)
N9: (-39.211,3.972,16.723)
O5': (-40.498,3.410,20.111)
O3': (-43.088,1.425,17.679)
OP2: (-39.831,1.234,21.192)
C3': (-41.911,2.100,18.158)
C1': (-40.576,3.420,16.593)
C5': (-41.685,4.088,19.698)
O6: (-35.073,6.024,16.481)
O4': (-41.441,4.283,17.316)
C8: (-38.486,3.842,17.889)
C2: (-37.630,5.810,14.067)
C6: (-36.169,5.700,16.005)
C5: (-37.232,4.956,16.598)
C4: (-38.388,4.713,15.873)
P: (-40.458,2.555,21.451)
C4': (-42.158,3.578,18.362)
C2': (-40.716,2.006,17.187)
O2': (-40.834,1.023,16.183)
N1: (-36.466,6.089,14.708)
N2: (-37.682,6.278,12.817)
N3: (-38.633,5.121,14.604)
N7: (-37.313,4.399,17.865)
N9: (-39.211,3.972,16.723)
O5': (-40.498,3.410,20.111)
O3': (-43.088,1.425,17.679)
Image (generated by PyMOL):