ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3LWP:D28:D29

Extra

PDB:
ATOM 1 O3' A A 27 53.814 -9.204 25.000 1.00 72.80 O
ATOM 2 P A A 28 54.936 -8.112 24.653 1.00 61.85 P
ATOM 3 OP1 A A 28 54.356 -7.131 23.700 1.00 48.86 O
ATOM 4 OP2 A A 28 56.252 -8.752 24.435 1.00 55.26 O
ATOM 5 O5' A A 28 55.051 -7.307 26.028 1.00 68.12 O
ATOM 6 C5' A A 28 55.366 -8.034 27.208 1.00 61.37 C
ATOM 7 C4' A A 28 56.026 -7.134 28.217 1.00 59.39 C
ATOM 8 O4' A A 28 56.301 -7.866 29.445 1.00 54.12 O
ATOM 9 C3' A A 28 57.360 -6.557 27.763 1.00 55.71 C
ATOM 10 O3' A A 28 57.533 -5.339 28.469 1.00 55.75 O
ATOM 11 C2' A A 28 58.339 -7.574 28.335 1.00 48.42 C
ATOM 12 O2' A A 28 59.654 -7.092 28.485 1.00 51.56 O
ATOM 13 C1' A A 28 57.696 -7.850 29.684 1.00 47.72 C
ATOM 14 N9 A A 28 58.082 -9.129 30.264 1.00 56.12 N
ATOM 15 C8 A A 28 58.704 -9.338 31.462 1.00 66.15 C
ATOM 16 N7 A A 28 58.935 -10.600 31.735 1.00 66.78 N
ATOM 17 C5 A A 28 58.424 -11.257 30.629 1.00 67.76 C
ATOM 18 C6 A A 28 58.358 -12.624 30.290 1.00 63.77 C
ATOM 19 N6 A A 28 58.823 -13.593 31.074 1.00 57.99 N
ATOM 20 N1 A A 28 57.777 -12.943 29.113 1.00 63.48 N
ATOM 21 C2 A A 28 57.309 -11.958 28.328 1.00 62.56 C
ATOM 22 N3 A A 28 57.324 -10.639 28.539 1.00 60.78 N
ATOM 23 C4 A A 28 57.895 -10.360 29.715 1.00 59.20 C
ATOM 24 P U A 29 58.010 -3.971 27.856 1.00 50.39 P
ATOM 25 OP1 U A 29 59.023 -4.194 26.799 1.00 45.99 O
ATOM 26 OP2 U A 29 58.254 -3.040 28.979 1.00 46.82 O
ATOM 27 O5' U A 29 56.680 -3.499 27.113 1.00 63.25 O
TER

ATOM 1 O3' A B 28 57.533 -5.339 28.469 1.00 55.75 O
ATOM 2 P U B 29 58.010 -3.971 27.856 1.00 50.39 P
ATOM 3 OP1 U B 29 59.023 -4.194 26.799 1.00 45.99 O
ATOM 4 OP2 U B 29 58.254 -3.040 28.979 1.00 46.82 O
ATOM 5 O5' U B 29 56.680 -3.499 27.113 1.00 63.25 O
ATOM 6 C5' U B 29 55.532 -3.213 27.907 1.00 56.95 C
ATOM 7 C4' U B 29 54.328 -2.897 27.059 1.00 53.69 C
ATOM 8 O4' U B 29 54.691 -1.856 26.117 1.00 55.02 O
ATOM 9 C3' U B 29 53.801 -4.048 26.208 1.00 54.73 C
ATOM 10 O3' U B 29 52.395 -3.883 26.036 1.00 60.31 O
ATOM 11 C2' U B 29 54.491 -3.838 24.864 1.00 49.35 C
ATOM 12 O2' U B 29 53.803 -4.370 23.753 1.00 49.78 O
ATOM 13 C1' U B 29 54.507 -2.324 24.792 1.00 49.35 C
ATOM 14 N1 U B 29 55.597 -1.795 23.967 1.00 51.62 N
ATOM 15 C2 U B 29 55.270 -1.092 22.833 1.00 57.10 C
ATOM 16 O2 U B 29 54.119 -0.912 22.474 1.00 58.67 O
ATOM 17 N3 U B 29 56.345 -0.606 22.136 1.00 53.93 N
ATOM 18 C4 U B 29 57.682 -0.747 22.444 1.00 56.23 C
ATOM 19 O4 U B 29 58.537 -0.258 21.705 1.00 56.50 O
ATOM 20 C5 U B 29 57.936 -1.488 23.652 1.00 56.14 C
ATOM 21 C6 U B 29 56.905 -1.971 24.356 1.00 50.19 C
ATOM 22 P G B 30 51.353 -4.259 27.188 1.00 65.51 P
ATOM 23 OP1 G B 30 50.163 -4.797 26.494 1.00 73.77 O
ATOM 24 OP2 G B 30 51.245 -3.124 28.130 1.00 55.36 O
ATOM 25 O5' G B 30 51.963 -5.536 27.942 1.00 57.23 O
TER

Atoms:
OP1: (54.356,-7.131,23.700)
OP2: (56.252,-8.752,24.435)
C3': (57.360,-6.557,27.763)
C1': (57.696,-7.850,29.684)
C5': (55.366,-8.034,27.208)
O4': (56.301,-7.866,29.445)
C8: (58.704,-9.338,31.462)
O2': (59.654,-7.092,28.485)
C6: (58.358,-12.624,30.290)
C5: (58.424,-11.257,30.629)
C4: (57.895,-10.360,29.715)
P: (54.936,-8.112,24.653)
C4': (56.026,-7.134,28.217)
C2': (58.339,-7.574,28.335)
C2: (57.309,-11.958,28.328)
N1: (57.777,-12.943,29.113)
N3: (57.324,-10.639,28.539)
N6: (58.823,-13.593,31.074)
N7: (58.935,-10.600,31.735)
N9: (58.082,-9.129,30.264)
O5': (55.051,-7.307,26.028)
O3': (57.533,-5.339,28.469)
C4: (57.682,-0.747,22.444)
N3: (56.345,-0.606,22.136)
OP1: (59.023,-4.194,26.799)
OP2: (58.254,-3.040,28.979)
C2: (55.270,-1.092,22.833)
C1': (54.507,-2.324,24.792)
C3': (53.801,-4.048,26.208)
O5': (56.680,-3.499,27.113)
O4': (54.691,-1.856,26.117)
C5': (55.532,-3.213,27.907)
P: (58.010,-3.971,27.856)
C4': (54.328,-2.897,27.059)
C2': (54.491,-3.838,24.864)
O2': (53.803,-4.370,23.753)
N1: (55.597,-1.795,23.967)
O4: (58.537,-0.258,21.705)
O2: (54.119,-0.912,22.474)
C6: (56.905,-1.971,24.356)
C5: (57.936,-1.488,23.652)
O3': (52.395,-3.883,26.036)
Image (generated by PyMOL):
PyMOL image
show in jmol