ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCM:0316:0317

Extra

PDB:
ATOM 1 O3' A A 315 14.642 125.606 20.536 1.00 36.77 O
ATOM 2 P U A 316 14.237 125.031 19.096 1.00 34.36 P
ATOM 3 OP1 U A 316 14.422 126.152 18.150 1.00 35.84 O
ATOM 4 OP2 U A 316 12.927 124.340 19.167 1.00 34.81 O
ATOM 5 O5' U A 316 15.366 123.947 18.818 1.00 34.09 O
ATOM 6 C5' U A 316 15.607 122.903 19.766 1.00 34.04 C
ATOM 7 C4' U A 316 17.074 122.829 20.107 1.00 36.61 C
ATOM 8 O4' U A 316 17.809 122.325 18.965 1.00 37.20 O
ATOM 9 C3' U A 316 17.761 124.128 20.519 1.00 38.29 C
ATOM 10 O3' U A 316 18.721 123.838 21.533 1.00 38.80 O
ATOM 11 C2' U A 316 18.462 124.549 19.230 1.00 39.17 C
ATOM 12 O2' U A 316 19.598 125.360 19.445 1.00 37.87 O
ATOM 13 C1' U A 316 18.877 123.194 18.664 1.00 39.47 C
ATOM 14 N1 U A 316 19.088 123.170 17.209 1.00 41.50 N
ATOM 15 C2 U A 316 20.224 122.536 16.731 1.00 41.67 C
ATOM 16 O2 U A 316 21.039 121.993 17.451 1.00 41.80 O
ATOM 17 N3 U A 316 20.366 122.552 15.370 1.00 43.22 N
ATOM 18 C4 U A 316 19.508 123.112 14.453 1.00 45.23 C
ATOM 19 O4 U A 316 19.774 123.026 13.252 1.00 48.80 O
ATOM 20 C5 U A 316 18.352 123.744 15.020 1.00 44.47 C
ATOM 21 C6 U A 316 18.188 123.753 16.347 1.00 43.14 C
ATOM 22 P A A 317 18.233 123.649 23.054 1.00 38.19 P
ATOM 23 OP1 A A 317 19.144 122.640 23.643 1.00 41.60 O
ATOM 24 OP2 A A 317 16.773 123.404 23.059 1.00 37.81 O
ATOM 25 O5' A A 317 18.489 125.061 23.754 1.00 40.17 O
TER

ATOM 1 O3' U B 316 18.721 123.838 21.533 1.00 38.80 O
ATOM 2 P A B 317 18.233 123.649 23.054 1.00 38.19 P
ATOM 3 OP1 A B 317 19.144 122.640 23.643 1.00 41.60 O
ATOM 4 OP2 A B 317 16.773 123.404 23.059 1.00 37.81 O
ATOM 5 O5' A B 317 18.489 125.061 23.754 1.00 40.17 O
ATOM 6 C5' A B 317 19.698 125.308 24.508 1.00 37.96 C
ATOM 7 C4' A B 317 19.683 126.701 25.106 1.00 36.33 C
ATOM 8 O4' A B 317 19.583 127.685 24.041 1.00 36.95 O
ATOM 9 C3' A B 317 18.548 127.021 26.071 1.00 33.98 C
ATOM 10 O3' A B 317 18.988 128.045 26.965 1.00 33.54 O
ATOM 11 C2' A B 317 17.526 127.670 25.151 1.00 35.08 C
ATOM 12 O2' A B 317 16.624 128.504 25.854 1.00 31.83 O
ATOM 13 C1' A B 317 18.450 128.496 24.258 1.00 36.67 C
ATOM 14 N9 A B 317 17.918 128.890 22.954 1.00 39.81 N
ATOM 15 C8 A B 317 17.180 128.151 22.062 1.00 39.28 C
ATOM 16 N7 A B 317 16.886 128.797 20.960 1.00 40.28 N
ATOM 17 C5 A B 317 17.464 130.047 21.139 1.00 41.06 C
ATOM 18 C6 A B 317 17.515 131.199 20.325 1.00 40.53 C
ATOM 19 N6 A B 317 16.970 131.276 19.109 1.00 38.04 N
ATOM 20 N1 A B 317 18.161 132.281 20.812 1.00 40.44 N
ATOM 21 C2 A B 317 18.721 132.203 22.025 1.00 40.49 C
ATOM 22 N3 A B 317 18.750 131.180 22.877 1.00 41.07 N
ATOM 23 C4 A B 317 18.094 130.120 22.368 1.00 41.15 C
ATOM 24 P C B 318 19.763 127.667 28.322 1.00 32.63 P
ATOM 25 OP1 C B 318 19.708 128.885 29.175 1.00 29.59 O
ATOM 26 OP2 C B 318 21.082 127.058 27.987 1.00 28.17 O
ATOM 27 O5' C B 318 18.857 126.541 28.998 1.00 33.01 O
TER

Atoms:
C4: (19.508,123.112,14.453)
N3: (20.366,122.552,15.370)
OP1: (14.422,126.152,18.150)
OP2: (12.927,124.340,19.167)
C2: (20.224,122.536,16.731)
C1': (18.877,123.194,18.664)
C3': (17.761,124.128,20.519)
O5': (15.366,123.947,18.818)
O4': (17.809,122.325,18.965)
C5': (15.607,122.903,19.766)
P: (14.237,125.031,19.096)
C4': (17.074,122.829,20.107)
C2': (18.462,124.549,19.230)
O2': (19.598,125.360,19.445)
N1: (19.088,123.170,17.209)
O4: (19.774,123.026,13.252)
O2: (21.039,121.993,17.451)
C6: (18.188,123.753,16.347)
C5: (18.352,123.744,15.020)
O3': (18.721,123.838,21.533)
OP1: (19.144,122.640,23.643)
OP2: (16.773,123.404,23.059)
C3': (18.548,127.021,26.071)
C1': (18.450,128.496,24.258)
C5': (19.698,125.308,24.508)
O4': (19.583,127.685,24.041)
C8: (17.180,128.151,22.062)
O2': (16.624,128.504,25.854)
C6: (17.515,131.199,20.325)
C5: (17.464,130.047,21.139)
C4: (18.094,130.120,22.368)
P: (18.233,123.649,23.054)
C4': (19.683,126.701,25.106)
C2': (17.526,127.670,25.151)
C2: (18.721,132.203,22.025)
N1: (18.161,132.281,20.812)
N3: (18.750,131.180,22.877)
N6: (16.970,131.276,19.109)
N7: (16.886,128.797,20.960)
N9: (17.918,128.890,22.954)
O5': (18.489,125.061,23.754)
O3': (18.988,128.045,26.965)
Image (generated by PyMOL):
PyMOL image
show in jmol