ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I56:0316:0317

Extra

PDB:
ATOM 1 O3' A A 315 14.982 126.845 20.726 1.00 43.16 O
ATOM 2 P U A 316 14.558 126.298 19.283 1.00 41.76 P
ATOM 3 OP1 U A 316 14.719 127.436 18.356 1.00 43.95 O
ATOM 4 OP2 U A 316 13.242 125.642 19.417 1.00 40.39 O
ATOM 5 O5' U A 316 15.660 125.204 18.931 1.00 41.31 O
ATOM 6 C5' U A 316 15.897 124.092 19.810 1.00 41.39 C
ATOM 7 C4' U A 316 17.359 124.017 20.179 1.00 42.65 C
ATOM 8 O4' U A 316 18.127 123.623 19.012 1.00 43.41 O
ATOM 9 C3' U A 316 17.993 125.305 20.694 1.00 42.96 C
ATOM 10 O3' U A 316 18.977 124.998 21.681 1.00 43.04 O
ATOM 11 C2' U A 316 18.661 125.863 19.445 1.00 43.81 C
ATOM 12 O2' U A 316 19.746 126.704 19.767 1.00 45.07 O
ATOM 13 C1' U A 316 19.131 124.582 18.752 1.00 44.23 C
ATOM 14 N1 U A 316 19.310 124.670 17.291 1.00 45.95 N
ATOM 15 C2 U A 316 20.460 124.116 16.729 1.00 46.48 C
ATOM 16 O2 U A 316 21.338 123.578 17.381 1.00 46.53 O
ATOM 17 N3 U A 316 20.544 124.219 15.363 1.00 47.74 N
ATOM 18 C4 U A 316 19.627 124.804 14.513 1.00 49.21 C
ATOM 19 O4 U A 316 19.849 124.821 13.297 1.00 50.93 O
ATOM 20 C5 U A 316 18.479 125.354 15.163 1.00 49.04 C
ATOM 21 C6 U A 316 18.362 125.272 16.492 1.00 47.81 C
ATOM 22 P A A 317 18.545 124.900 23.229 1.00 43.47 P
ATOM 23 OP1 A A 317 19.422 123.878 23.865 1.00 39.12 O
ATOM 24 OP2 A A 317 17.070 124.717 23.242 1.00 43.01 O
ATOM 25 O5' A A 317 18.858 126.341 23.844 1.00 40.18 O
TER

ATOM 1 O3' U B 316 18.977 124.998 21.681 1.00 43.04 O
ATOM 2 P A B 317 18.545 124.900 23.229 1.00 43.47 P
ATOM 3 OP1 A B 317 19.422 123.878 23.865 1.00 39.12 O
ATOM 4 OP2 A B 317 17.070 124.717 23.242 1.00 43.01 O
ATOM 5 O5' A B 317 18.858 126.341 23.844 1.00 40.18 O
ATOM 6 C5' A B 317 20.058 126.573 24.601 1.00 39.31 C
ATOM 7 C4' A B 317 20.041 127.949 25.223 1.00 38.33 C
ATOM 8 O4' A B 317 19.973 128.946 24.167 1.00 38.84 O
ATOM 9 C3' A B 317 18.885 128.248 26.168 1.00 37.93 C
ATOM 10 O3' A B 317 19.301 129.186 27.169 1.00 39.37 O
ATOM 11 C2' A B 317 17.904 128.955 25.240 1.00 38.07 C
ATOM 12 O2' A B 317 17.005 129.798 25.924 1.00 36.97 O
ATOM 13 C1' A B 317 18.861 129.780 24.383 1.00 39.29 C
ATOM 14 N9 A B 317 18.345 130.221 23.085 1.00 41.33 N
ATOM 15 C8 A B 317 17.631 129.505 22.156 1.00 42.53 C
ATOM 16 N7 A B 317 17.289 130.201 21.099 1.00 43.46 N
ATOM 17 C5 A B 317 17.819 131.460 21.344 1.00 44.01 C
ATOM 18 C6 A B 317 17.795 132.662 20.606 1.00 44.55 C
ATOM 19 N6 A B 317 17.195 132.799 19.420 1.00 43.05 N
ATOM 20 N1 A B 317 18.418 133.735 21.138 1.00 45.72 N
ATOM 21 C2 A B 317 19.021 133.602 22.324 1.00 45.64 C
ATOM 22 N3 A B 317 19.112 132.532 23.110 1.00 44.90 N
ATOM 23 C4 A B 317 18.481 131.483 22.558 1.00 43.19 C
ATOM 24 P C B 318 20.120 128.694 28.471 1.00 39.82 P
ATOM 25 OP1 C B 318 20.253 129.879 29.350 1.00 38.93 O
ATOM 26 OP2 C B 318 21.337 127.960 28.035 1.00 38.33 O
ATOM 27 O5' C B 318 19.164 127.666 29.221 1.00 40.59 O
TER

Atoms:
C4: (19.627,124.804,14.513)
N3: (20.544,124.219,15.363)
OP1: (14.719,127.436,18.356)
OP2: (13.242,125.642,19.417)
C2: (20.460,124.116,16.729)
C1': (19.131,124.582,18.752)
C3': (17.993,125.305,20.694)
O5': (15.660,125.204,18.931)
O4': (18.127,123.623,19.012)
C5': (15.897,124.092,19.810)
P: (14.558,126.298,19.283)
C4': (17.359,124.017,20.179)
C2': (18.661,125.863,19.445)
O2': (19.746,126.704,19.767)
N1: (19.310,124.670,17.291)
O4: (19.849,124.821,13.297)
O2: (21.338,123.578,17.381)
C6: (18.362,125.272,16.492)
C5: (18.479,125.354,15.163)
O3': (18.977,124.998,21.681)
OP1: (19.422,123.878,23.865)
OP2: (17.070,124.717,23.242)
C3': (18.885,128.248,26.168)
C1': (18.861,129.780,24.383)
C5': (20.058,126.573,24.601)
O4': (19.973,128.946,24.167)
C8: (17.631,129.505,22.156)
O2': (17.005,129.798,25.924)
C6: (17.795,132.662,20.606)
C5: (17.819,131.460,21.344)
C4: (18.481,131.483,22.558)
P: (18.545,124.900,23.229)
C4': (20.041,127.949,25.223)
C2': (17.904,128.955,25.240)
C2: (19.021,133.602,22.324)
N1: (18.418,133.735,21.138)
N3: (19.112,132.532,23.110)
N6: (17.195,132.799,19.420)
N7: (17.289,130.201,21.099)
N9: (18.345,130.221,23.085)
O5': (18.858,126.341,23.844)
O3': (19.301,129.186,27.169)
Image (generated by PyMOL):
PyMOL image
show in jmol