Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1207:1208
Extra
PDB:
ATOM 1 O3' A A 206 109.488 -14.318 108.056 1.00 57.86 O
ATOM 2 P U A 207 110.133 -15.773 108.097 1.00 61.70 P
ATOM 3 OP1 U A 207 110.316 -16.107 109.507 1.00 62.23 O
ATOM 4 OP2 U A 207 111.308 -15.766 107.212 1.00 61.82 O
ATOM 5 O5' U A 207 108.979 -16.662 107.461 1.00 61.16 O
ATOM 6 C5' U A 207 108.254 -17.558 108.251 1.00 61.22 C
ATOM 7 C4' U A 207 106.774 -17.405 108.080 1.00 60.66 C
ATOM 8 O4' U A 207 106.175 -18.426 108.895 1.00 60.79 O
ATOM 9 C3' U A 207 106.183 -16.090 108.585 1.00 60.55 C
ATOM 10 O3' U A 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 11 C2' U A 207 106.071 -16.401 110.075 1.00 61.01 C
ATOM 12 O2' U A 207 105.149 -15.611 110.760 1.00 60.90 O
ATOM 13 C1' U A 207 105.616 -17.855 110.051 1.00 60.95 C
ATOM 14 N1 U A 207 106.057 -18.657 111.210 1.00 61.53 N
ATOM 15 C2 U A 207 105.134 -19.478 111.859 1.00 61.50 C
ATOM 16 O2 U A 207 103.964 -19.584 111.561 1.00 61.03 O
ATOM 17 N3 U A 207 105.576 -20.227 112.904 1.00 62.06 N
ATOM 18 C4 U A 207 106.857 -20.228 113.384 1.00 62.64 C
ATOM 19 O4 U A 207 107.108 -20.944 114.369 1.00 63.13 O
ATOM 20 C5 U A 207 107.774 -19.363 112.669 1.00 62.64 C
ATOM 21 C6 U A 207 107.353 -18.635 111.620 1.00 62.09 C
ATOM 22 P A A 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 23 OP1 A A 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 24 OP2 A A 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 25 O5' A A 208 104.222 -13.663 106.832 1.00 55.06 O
TER
ATOM 1 O3' U B 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 2 P A B 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 3 OP1 A B 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 4 OP2 A B 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 5 O5' A B 208 104.222 -13.663 106.832 1.00 55.06 O
ATOM 6 C5' A B 208 102.868 -13.218 106.901 1.00 54.64 C
ATOM 7 C4' A B 208 102.728 -11.724 107.146 1.00 54.63 C
ATOM 8 O4' A B 208 103.438 -11.348 108.361 1.00 55.21 O
ATOM 9 C3' A B 208 103.262 -10.805 106.044 1.00 54.43 C
ATOM 10 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 11 C2' A B 208 104.659 -10.492 106.556 1.00 55.02 C
ATOM 12 O2' A B 208 105.242 -9.340 106.004 1.00 55.01 O
ATOM 13 C1' A B 208 104.376 -10.325 108.047 1.00 55.39 C
ATOM 14 N9 A B 208 105.553 -10.465 108.914 1.00 56.04 N
ATOM 15 C8 A B 208 106.704 -11.199 108.756 1.00 56.37 C
ATOM 16 N7 A B 208 107.597 -11.061 109.736 1.00 56.98 N
ATOM 17 C5 A B 208 106.977 -10.167 110.598 1.00 57.05 C
ATOM 18 C6 A B 208 107.369 -9.601 111.827 1.00 57.58 C
ATOM 19 N6 A B 208 108.508 -9.853 112.432 1.00 58.17 N
ATOM 20 N1 A B 208 106.540 -8.739 112.431 1.00 57.51 N
ATOM 21 C2 A B 208 105.375 -8.486 111.802 1.00 56.91 C
ATOM 22 N3 A B 208 104.880 -8.932 110.640 1.00 56.37 N
ATOM 23 C4 A B 208 105.738 -9.788 110.083 1.00 56.47 C
ATOM 24 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 25 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 26 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 27 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
TER
ATOM 2 P U A 207 110.133 -15.773 108.097 1.00 61.70 P
ATOM 3 OP1 U A 207 110.316 -16.107 109.507 1.00 62.23 O
ATOM 4 OP2 U A 207 111.308 -15.766 107.212 1.00 61.82 O
ATOM 5 O5' U A 207 108.979 -16.662 107.461 1.00 61.16 O
ATOM 6 C5' U A 207 108.254 -17.558 108.251 1.00 61.22 C
ATOM 7 C4' U A 207 106.774 -17.405 108.080 1.00 60.66 C
ATOM 8 O4' U A 207 106.175 -18.426 108.895 1.00 60.79 O
ATOM 9 C3' U A 207 106.183 -16.090 108.585 1.00 60.55 C
ATOM 10 O3' U A 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 11 C2' U A 207 106.071 -16.401 110.075 1.00 61.01 C
ATOM 12 O2' U A 207 105.149 -15.611 110.760 1.00 60.90 O
ATOM 13 C1' U A 207 105.616 -17.855 110.051 1.00 60.95 C
ATOM 14 N1 U A 207 106.057 -18.657 111.210 1.00 61.53 N
ATOM 15 C2 U A 207 105.134 -19.478 111.859 1.00 61.50 C
ATOM 16 O2 U A 207 103.964 -19.584 111.561 1.00 61.03 O
ATOM 17 N3 U A 207 105.576 -20.227 112.904 1.00 62.06 N
ATOM 18 C4 U A 207 106.857 -20.228 113.384 1.00 62.64 C
ATOM 19 O4 U A 207 107.108 -20.944 114.369 1.00 63.13 O
ATOM 20 C5 U A 207 107.774 -19.363 112.669 1.00 62.64 C
ATOM 21 C6 U A 207 107.353 -18.635 111.620 1.00 62.09 C
ATOM 22 P A A 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 23 OP1 A A 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 24 OP2 A A 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 25 O5' A A 208 104.222 -13.663 106.832 1.00 55.06 O
TER
ATOM 1 O3' U B 207 104.836 -15.871 108.037 1.00 59.94 O
ATOM 2 P A B 208 104.558 -15.213 106.540 1.00 55.14 P
ATOM 3 OP1 A B 208 103.345 -15.862 106.013 1.00 54.64 O
ATOM 4 OP2 A B 208 105.819 -15.334 105.750 1.00 55.31 O
ATOM 5 O5' A B 208 104.222 -13.663 106.832 1.00 55.06 O
ATOM 6 C5' A B 208 102.868 -13.218 106.901 1.00 54.64 C
ATOM 7 C4' A B 208 102.728 -11.724 107.146 1.00 54.63 C
ATOM 8 O4' A B 208 103.438 -11.348 108.361 1.00 55.21 O
ATOM 9 C3' A B 208 103.262 -10.805 106.044 1.00 54.43 C
ATOM 10 O3' A B 208 102.500 -9.588 106.031 1.00 54.18 O
ATOM 11 C2' A B 208 104.659 -10.492 106.556 1.00 55.02 C
ATOM 12 O2' A B 208 105.242 -9.340 106.004 1.00 55.01 O
ATOM 13 C1' A B 208 104.376 -10.325 108.047 1.00 55.39 C
ATOM 14 N9 A B 208 105.553 -10.465 108.914 1.00 56.04 N
ATOM 15 C8 A B 208 106.704 -11.199 108.756 1.00 56.37 C
ATOM 16 N7 A B 208 107.597 -11.061 109.736 1.00 56.98 N
ATOM 17 C5 A B 208 106.977 -10.167 110.598 1.00 57.05 C
ATOM 18 C6 A B 208 107.369 -9.601 111.827 1.00 57.58 C
ATOM 19 N6 A B 208 108.508 -9.853 112.432 1.00 58.17 N
ATOM 20 N1 A B 208 106.540 -8.739 112.431 1.00 57.51 N
ATOM 21 C2 A B 208 105.375 -8.486 111.802 1.00 56.91 C
ATOM 22 N3 A B 208 104.880 -8.932 110.640 1.00 56.37 N
ATOM 23 C4 A B 208 105.738 -9.788 110.083 1.00 56.47 C
ATOM 24 P G B 209 101.100 -9.508 105.257 1.00 54.01 P
ATOM 25 OP1 G B 209 100.641 -8.103 105.287 1.00 53.87 O
ATOM 26 OP2 G B 209 100.230 -10.526 105.838 1.00 53.94 O
ATOM 27 O5' G B 209 101.499 -9.917 103.767 1.00 53.70 O
TER
Atoms:
C4: (106.857,-20.228,113.384)
N3: (105.576,-20.227,112.904)
OP1: (110.316,-16.107,109.507)
OP2: (111.308,-15.766,107.212)
C2: (105.134,-19.478,111.859)
C1': (105.616,-17.855,110.051)
C3': (106.183,-16.090,108.585)
O5': (108.979,-16.662,107.461)
O4': (106.175,-18.426,108.895)
C5': (108.254,-17.558,108.251)
P: (110.133,-15.773,108.097)
C4': (106.774,-17.405,108.080)
C2': (106.071,-16.401,110.075)
O2': (105.149,-15.611,110.760)
N1: (106.057,-18.657,111.210)
O4: (107.108,-20.944,114.369)
O2: (103.964,-19.584,111.561)
C6: (107.353,-18.635,111.620)
C5: (107.774,-19.363,112.669)
O3': (104.836,-15.871,108.037)
N3: (105.576,-20.227,112.904)
OP1: (110.316,-16.107,109.507)
OP2: (111.308,-15.766,107.212)
C2: (105.134,-19.478,111.859)
C1': (105.616,-17.855,110.051)
C3': (106.183,-16.090,108.585)
O5': (108.979,-16.662,107.461)
O4': (106.175,-18.426,108.895)
C5': (108.254,-17.558,108.251)
P: (110.133,-15.773,108.097)
C4': (106.774,-17.405,108.080)
C2': (106.071,-16.401,110.075)
O2': (105.149,-15.611,110.760)
N1: (106.057,-18.657,111.210)
O4: (107.108,-20.944,114.369)
O2: (103.964,-19.584,111.561)
C6: (107.353,-18.635,111.620)
C5: (107.774,-19.363,112.669)
O3': (104.836,-15.871,108.037)
OP1: (103.345,-15.862,106.013)
OP2: (105.819,-15.334,105.750)
C3': (103.262,-10.805,106.044)
C1': (104.376,-10.325,108.047)
C5': (102.868,-13.218,106.901)
O4': (103.438,-11.348,108.361)
C8: (106.704,-11.199,108.756)
O2': (105.242,-9.340,106.004)
C6: (107.369,-9.601,111.827)
C5: (106.977,-10.167,110.598)
C4: (105.738,-9.788,110.083)
P: (104.558,-15.213,106.540)
C4': (102.728,-11.724,107.146)
C2': (104.659,-10.492,106.556)
C2: (105.375,-8.486,111.802)
N1: (106.540,-8.739,112.431)
N3: (104.880,-8.932,110.640)
N6: (108.508,-9.853,112.432)
N7: (107.597,-11.061,109.736)
N9: (105.553,-10.465,108.914)
O5': (104.222,-13.663,106.832)
O3': (102.500,-9.588,106.031)
OP2: (105.819,-15.334,105.750)
C3': (103.262,-10.805,106.044)
C1': (104.376,-10.325,108.047)
C5': (102.868,-13.218,106.901)
O4': (103.438,-11.348,108.361)
C8: (106.704,-11.199,108.756)
O2': (105.242,-9.340,106.004)
C6: (107.369,-9.601,111.827)
C5: (106.977,-10.167,110.598)
C4: (105.738,-9.788,110.083)
P: (104.558,-15.213,106.540)
C4': (102.728,-11.724,107.146)
C2': (104.659,-10.492,106.556)
C2: (105.375,-8.486,111.802)
N1: (106.540,-8.739,112.431)
N3: (104.880,-8.932,110.640)
N6: (108.508,-9.853,112.432)
N7: (107.597,-11.061,109.736)
N9: (105.553,-10.465,108.914)
O5': (104.222,-13.663,106.832)
O3': (102.500,-9.588,106.031)
Image (generated by PyMOL):