Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1547:A1548
Extra
PDB:
ATOM 1 O3' A A1546 -16.279 -24.129 2.524 1.00 8.49 O
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' U B1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 2 P G B1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 3 OP1 G B1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 4 OP2 G B1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 5 O5' G B1548 -17.188 -26.092 9.934 1.00 14.86 O
ATOM 6 C5' G B1548 -16.398 -27.134 9.377 1.00 14.86 C
ATOM 7 C4' G B1548 -15.120 -27.334 10.159 1.00 14.86 C
ATOM 8 O4' G B1548 -14.057 -27.758 9.267 1.00 14.86 O
ATOM 9 C3' G B1548 -14.574 -26.096 10.860 1.00 14.86 C
ATOM 10 O3' G B1548 -15.079 -25.972 12.175 1.00 14.86 O
ATOM 11 C2' G B1548 -13.066 -26.296 10.814 1.00 14.86 C
ATOM 12 O2' G B1548 -12.644 -27.179 11.847 1.00 14.86 O
ATOM 13 C1' G B1548 -12.898 -26.997 9.479 1.00 14.86 C
ATOM 14 N9 G B1548 -12.798 -26.059 8.357 1.00 14.49 N
ATOM 15 C8 G B1548 -13.799 -25.982 7.438 1.00 14.49 C
ATOM 16 N7 G B1548 -13.588 -25.150 6.475 1.00 14.49 N
ATOM 17 C5 G B1548 -12.358 -24.625 6.774 1.00 14.49 C
ATOM 18 C6 G B1548 -11.638 -23.648 6.047 1.00 14.49 C
ATOM 19 O6 G B1548 -11.968 -23.071 5.006 1.00 14.49 O
ATOM 20 N1 G B1548 -10.429 -23.389 6.652 1.00 14.49 N
ATOM 21 C2 G B1548 -10.016 -23.996 7.804 1.00 14.49 C
ATOM 22 N2 G B1548 -8.823 -23.592 8.200 1.00 14.49 N
ATOM 23 N3 G B1548 -10.660 -24.913 8.516 1.00 14.49 N
ATOM 24 C4 G B1548 -11.836 -25.188 7.932 1.00 14.49 C
ATOM 25 P C B1549 -14.569 -24.805 13.130 1.00 5.45 P
ATOM 26 OP1 C B1549 -15.236 -25.001 14.444 1.00 5.45 O
ATOM 27 OP2 C B1549 -14.779 -23.517 12.392 1.00 5.45 O
ATOM 28 O5' C B1549 -13.017 -25.106 13.247 1.00 5.45 O
TER
ATOM 2 P U A1547 -16.740 -22.617 2.919 1.00 0.47 P
ATOM 3 OP1 U A1547 -17.205 -21.958 1.679 1.00 0.47 O
ATOM 4 OP2 U A1547 -15.633 -21.992 3.686 1.00 0.47 O
ATOM 5 O5' U A1547 -17.969 -22.872 3.891 1.00 0.47 O
ATOM 6 C5' U A1547 -17.753 -22.995 5.293 1.00 0.47 C
ATOM 7 C4' U A1547 -18.507 -24.156 5.880 1.00 0.47 C
ATOM 8 O4' U A1547 -19.314 -24.773 4.855 1.00 0.47 O
ATOM 9 C3' U A1547 -17.643 -25.265 6.467 1.00 0.47 C
ATOM 10 O3' U A1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 11 C2' U A1547 -17.779 -26.415 5.479 1.00 0.47 C
ATOM 12 O2' U A1547 -17.694 -27.700 6.073 1.00 0.47 O
ATOM 13 C1' U A1547 -19.157 -26.168 4.915 1.00 0.47 C
ATOM 14 N1 U A1547 -19.345 -26.707 3.584 1.00 0.33 N
ATOM 15 C2 U A1547 -20.056 -27.886 3.563 1.00 0.33 C
ATOM 16 O2 U A1547 -20.488 -28.426 4.567 1.00 0.33 O
ATOM 17 N3 U A1547 -20.260 -28.412 2.334 1.00 0.33 N
ATOM 18 C4 U A1547 -19.853 -27.884 1.144 1.00 0.33 C
ATOM 19 O4 U A1547 -20.136 -28.528 0.119 1.00 0.33 O
ATOM 20 C5 U A1547 -19.119 -26.634 1.264 1.00 0.33 C
ATOM 21 C6 U A1547 -18.888 -26.087 2.461 1.00 0.33 C
ATOM 22 P G A1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 23 OP1 G A1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 24 OP2 G A1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 25 O5' G A1548 -17.188 -26.092 9.934 1.00 14.86 O
TER
ATOM 1 O3' U B1547 -18.182 -25.658 7.701 1.00 0.47 O
ATOM 2 P G B1548 -17.732 -24.891 9.021 1.00 14.86 P
ATOM 3 OP1 G B1548 -18.963 -24.290 9.614 1.00 14.86 O
ATOM 4 OP2 G B1548 -16.615 -23.984 8.633 1.00 14.86 O
ATOM 5 O5' G B1548 -17.188 -26.092 9.934 1.00 14.86 O
ATOM 6 C5' G B1548 -16.398 -27.134 9.377 1.00 14.86 C
ATOM 7 C4' G B1548 -15.120 -27.334 10.159 1.00 14.86 C
ATOM 8 O4' G B1548 -14.057 -27.758 9.267 1.00 14.86 O
ATOM 9 C3' G B1548 -14.574 -26.096 10.860 1.00 14.86 C
ATOM 10 O3' G B1548 -15.079 -25.972 12.175 1.00 14.86 O
ATOM 11 C2' G B1548 -13.066 -26.296 10.814 1.00 14.86 C
ATOM 12 O2' G B1548 -12.644 -27.179 11.847 1.00 14.86 O
ATOM 13 C1' G B1548 -12.898 -26.997 9.479 1.00 14.86 C
ATOM 14 N9 G B1548 -12.798 -26.059 8.357 1.00 14.49 N
ATOM 15 C8 G B1548 -13.799 -25.982 7.438 1.00 14.49 C
ATOM 16 N7 G B1548 -13.588 -25.150 6.475 1.00 14.49 N
ATOM 17 C5 G B1548 -12.358 -24.625 6.774 1.00 14.49 C
ATOM 18 C6 G B1548 -11.638 -23.648 6.047 1.00 14.49 C
ATOM 19 O6 G B1548 -11.968 -23.071 5.006 1.00 14.49 O
ATOM 20 N1 G B1548 -10.429 -23.389 6.652 1.00 14.49 N
ATOM 21 C2 G B1548 -10.016 -23.996 7.804 1.00 14.49 C
ATOM 22 N2 G B1548 -8.823 -23.592 8.200 1.00 14.49 N
ATOM 23 N3 G B1548 -10.660 -24.913 8.516 1.00 14.49 N
ATOM 24 C4 G B1548 -11.836 -25.188 7.932 1.00 14.49 C
ATOM 25 P C B1549 -14.569 -24.805 13.130 1.00 5.45 P
ATOM 26 OP1 C B1549 -15.236 -25.001 14.444 1.00 5.45 O
ATOM 27 OP2 C B1549 -14.779 -23.517 12.392 1.00 5.45 O
ATOM 28 O5' C B1549 -13.017 -25.106 13.247 1.00 5.45 O
TER
Atoms:
C4: (-19.853,-27.884,1.144)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
N3: (-20.260,-28.412,2.334)
OP1: (-17.205,-21.958,1.679)
OP2: (-15.633,-21.992,3.686)
C2: (-20.056,-27.886,3.563)
C1': (-19.157,-26.168,4.915)
C3': (-17.643,-25.265,6.467)
O5': (-17.969,-22.872,3.891)
O4': (-19.314,-24.773,4.855)
C5': (-17.753,-22.995,5.293)
P: (-16.740,-22.617,2.919)
C4': (-18.507,-24.156,5.880)
C2': (-17.779,-26.415,5.479)
O2': (-17.694,-27.700,6.073)
N1: (-19.345,-26.707,3.584)
O4: (-20.136,-28.528,0.119)
O2: (-20.488,-28.426,4.567)
C6: (-18.888,-26.087,2.461)
C5: (-19.119,-26.634,1.264)
O3': (-18.182,-25.658,7.701)
OP1: (-18.963,-24.290,9.614)
OP2: (-16.615,-23.984,8.633)
C3': (-14.574,-26.096,10.860)
C1': (-12.898,-26.997,9.479)
C5': (-16.398,-27.134,9.377)
O6: (-11.968,-23.071,5.006)
O4': (-14.057,-27.758,9.267)
C8: (-13.799,-25.982,7.438)
C2: (-10.016,-23.996,7.804)
C6: (-11.638,-23.648,6.047)
C5: (-12.358,-24.625,6.774)
C4: (-11.836,-25.188,7.932)
P: (-17.732,-24.891,9.021)
C4': (-15.120,-27.334,10.159)
C2': (-13.066,-26.296,10.814)
O2': (-12.644,-27.179,11.847)
N1: (-10.429,-23.389,6.652)
N2: (-8.823,-23.592,8.200)
N3: (-10.660,-24.913,8.516)
N7: (-13.588,-25.150,6.475)
N9: (-12.798,-26.059,8.357)
O5': (-17.188,-26.092,9.934)
O3': (-15.079,-25.972,12.175)
OP2: (-16.615,-23.984,8.633)
C3': (-14.574,-26.096,10.860)
C1': (-12.898,-26.997,9.479)
C5': (-16.398,-27.134,9.377)
O6: (-11.968,-23.071,5.006)
O4': (-14.057,-27.758,9.267)
C8: (-13.799,-25.982,7.438)
C2: (-10.016,-23.996,7.804)
C6: (-11.638,-23.648,6.047)
C5: (-12.358,-24.625,6.774)
C4: (-11.836,-25.188,7.932)
P: (-17.732,-24.891,9.021)
C4': (-15.120,-27.334,10.159)
C2': (-13.066,-26.296,10.814)
O2': (-12.644,-27.179,11.847)
N1: (-10.429,-23.389,6.652)
N2: (-8.823,-23.592,8.200)
N3: (-10.660,-24.913,8.516)
N7: (-13.588,-25.150,6.475)
N9: (-12.798,-26.059,8.357)
O5': (-17.188,-26.092,9.934)
O3': (-15.079,-25.972,12.175)
Image (generated by PyMOL):