ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A957:A958

Extra

PDB:
ATOM 1 O3' G A 956 115.058 -52.763 -5.211 1.00 33.20 O
ATOM 2 P A A 957 115.988 -51.816 -4.328 1.00 34.31 P
ATOM 3 OP1 A A 957 115.122 -51.102 -3.365 1.00 49.61 O
ATOM 4 OP2 A A 957 116.823 -51.023 -5.257 1.00 48.23 O
ATOM 5 O5' A A 957 116.866 -52.849 -3.567 1.00 38.53 O
ATOM 6 C5' A A 957 117.872 -52.411 -2.691 1.00 55.89 C
ATOM 7 C4' A A 957 118.227 -53.490 -1.736 1.00 46.84 C
ATOM 8 O4' A A 957 117.095 -53.697 -0.868 1.00 38.92 O
ATOM 9 C3' A A 957 118.503 -54.829 -2.400 1.00 43.12 C
ATOM 10 O3' A A 957 119.428 -55.579 -1.609 1.00 67.96 O
ATOM 11 C2' A A 957 117.139 -55.484 -2.370 1.00 33.48 C
ATOM 12 O2' A A 957 117.166 -56.879 -2.452 1.00 46.95 O
ATOM 13 C1' A A 957 116.611 -55.010 -1.027 1.00 43.03 C
ATOM 14 N9 A A 957 115.150 -54.973 -0.929 1.00 45.26 N
ATOM 15 C8 A A 957 114.281 -54.150 -1.597 1.00 56.69 C
ATOM 16 N7 A A 957 113.018 -54.357 -1.304 1.00 59.73 N
ATOM 17 C5 A A 957 113.076 -55.375 -0.367 1.00 47.70 C
ATOM 18 C6 A A 957 112.077 -56.049 0.335 1.00 49.37 C
ATOM 19 N6 A A 957 110.771 -55.775 0.202 1.00 49.31 N
ATOM 20 N1 A A 957 112.477 -57.019 1.181 1.00 46.58 N
ATOM 21 C2 A A 957 113.771 -57.284 1.304 1.00 42.99 C
ATOM 22 N3 A A 957 114.793 -56.715 0.697 1.00 45.62 N
ATOM 23 C4 A A 957 114.373 -55.758 -0.128 1.00 41.16 C
ATOM 24 P U A 958 120.996 -55.603 -1.981 1.00 29.63 P
ATOM 25 OP1 U A 958 121.725 -55.874 -0.729 1.00 88.23 O
ATOM 26 OP2 U A 958 121.293 -54.357 -2.723 1.00 63.42 O
ATOM 27 O5' U A 958 121.095 -56.861 -2.947 1.00 55.86 O
TER

ATOM 1 O3' A B 957 119.428 -55.579 -1.609 1.00 67.96 O
ATOM 2 P U B 958 120.996 -55.603 -1.981 1.00 29.63 P
ATOM 3 OP1 U B 958 121.725 -55.874 -0.729 1.00 88.23 O
ATOM 4 OP2 U B 958 121.293 -54.357 -2.723 1.00 63.42 O
ATOM 5 O5' U B 958 121.095 -56.861 -2.947 1.00 55.86 O
ATOM 6 C5' U B 958 122.296 -57.616 -3.033 1.00 84.32 C
ATOM 7 C4' U B 958 122.079 -59.066 -2.687 1.00 88.08 C
ATOM 8 O4' U B 958 123.362 -59.640 -2.299 1.00 88.08 O
ATOM 9 C3' U B 958 121.099 -59.305 -1.537 1.00 91.27 C
ATOM 10 O3' U B 958 119.981 -60.083 -1.950 1.00 77.59 O
ATOM 11 C2' U B 958 121.887 -60.074 -0.467 1.00102.06 C
ATOM 12 O2' U B 958 121.264 -61.267 -0.021 1.00105.07 O
ATOM 13 C1' U B 958 123.256 -60.367 -1.087 1.00 98.65 C
ATOM 14 N1 U B 958 124.350 -59.948 -0.172 1.00117.80 N
ATOM 15 C2 U B 958 125.225 -60.832 0.466 1.00121.57 C
ATOM 16 O2 U B 958 125.294 -62.038 0.247 1.00126.66 O
ATOM 17 N3 U B 958 126.085 -60.218 1.359 1.00115.79 N
ATOM 18 C4 U B 958 126.142 -58.880 1.716 1.00102.18 C
ATOM 19 O4 U B 958 126.969 -58.476 2.534 1.00 93.91 O
ATOM 20 C5 U B 958 125.181 -58.063 1.062 1.00108.90 C
ATOM 21 C6 U B 958 124.336 -58.622 0.195 1.00114.58 C
ATOM 22 P A B 959 118.917 -60.572 -0.834 1.00 74.46 P
ATOM 23 OP1 A B 959 119.401 -60.089 0.496 1.00 79.29 O
ATOM 24 OP2 A B 959 118.710 -62.023 -1.041 1.00 81.48 O
ATOM 25 O5' A B 959 117.604 -59.781 -1.216 1.00 69.63 O
TER

Atoms:
OP1: (115.122,-51.102,-3.365)
OP2: (116.823,-51.023,-5.257)
C3': (118.503,-54.829,-2.400)
C1': (116.611,-55.010,-1.027)
C5': (117.872,-52.411,-2.691)
O4': (117.095,-53.697,-0.868)
C8: (114.281,-54.150,-1.597)
O2': (117.166,-56.879,-2.452)
C6: (112.077,-56.049,0.335)
C5: (113.076,-55.375,-0.367)
C4: (114.373,-55.758,-0.128)
P: (115.988,-51.816,-4.328)
C4': (118.227,-53.490,-1.736)
C2': (117.139,-55.484,-2.370)
C2: (113.771,-57.284,1.304)
N1: (112.477,-57.019,1.181)
N3: (114.793,-56.715,0.697)
N6: (110.771,-55.775,0.202)
N7: (113.018,-54.357,-1.304)
N9: (115.150,-54.973,-0.929)
O5': (116.866,-52.849,-3.567)
O3': (119.428,-55.579,-1.609)
C4: (126.142,-58.880,1.716)
N3: (126.085,-60.218,1.359)
OP1: (121.725,-55.874,-0.729)
OP2: (121.293,-54.357,-2.723)
C2: (125.225,-60.832,0.466)
C1': (123.256,-60.367,-1.087)
C3': (121.099,-59.305,-1.537)
O5': (121.095,-56.861,-2.947)
O4': (123.362,-59.640,-2.299)
C5': (122.296,-57.616,-3.033)
P: (120.996,-55.603,-1.981)
C4': (122.079,-59.066,-2.687)
C2': (121.887,-60.074,-0.467)
O2': (121.264,-61.267,-0.021)
N1: (124.350,-59.948,-0.172)
O4: (126.969,-58.476,2.534)
O2: (125.294,-62.038,0.247)
C6: (124.336,-58.622,0.195)
C5: (125.181,-58.063,1.062)
O3': (119.981,-60.083,-1.950)
Image (generated by PyMOL):
PyMOL image
show in jmol