Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A488:A489
Extra
PDB:
ATOM 1 O3' G A 487 -19.254 -93.948 6.442 1.00 0.01 O
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' G B 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 2 P C B 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 3 OP1 C B 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 4 OP2 C B 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 5 O5' C B 489 -13.840 -91.174 11.938 1.00 4.76 O
ATOM 6 C5' C B 489 -14.243 -92.493 12.231 1.00 4.76 C
ATOM 7 C4' C B 489 -14.236 -92.740 13.707 1.00 4.76 C
ATOM 8 O4' C B 489 -12.869 -92.691 14.194 1.00 4.76 O
ATOM 9 C3' C B 489 -15.001 -91.715 14.524 1.00 4.76 C
ATOM 10 O3' C B 489 -15.553 -92.359 15.662 1.00 4.76 O
ATOM 11 C2' C B 489 -13.919 -90.741 14.934 1.00 4.76 C
ATOM 12 O2' C B 489 -14.228 -89.955 16.061 1.00 4.76 O
ATOM 13 C1' C B 489 -12.766 -91.697 15.195 1.00 4.76 C
ATOM 14 N1 C B 489 -11.444 -91.066 15.096 1.00 5.35 N
ATOM 15 C2 C B 489 -10.634 -91.046 16.229 1.00 5.35 C
ATOM 16 O2 C B 489 -11.011 -91.588 17.297 1.00 5.35 O
ATOM 17 N3 C B 489 -9.446 -90.424 16.105 1.00 5.35 N
ATOM 18 C4 C B 489 -9.062 -89.859 14.953 1.00 5.35 C
ATOM 19 N4 C B 489 -7.857 -89.261 14.899 1.00 5.35 N
ATOM 20 C5 C B 489 -9.884 -89.889 13.794 1.00 5.35 C
ATOM 21 C6 C B 489 -11.063 -90.493 13.918 1.00 5.35 C
ATOM 22 P G B 490 -16.902 -93.192 15.466 1.00 0.01 P
ATOM 23 OP1 G B 490 -17.358 -93.652 16.794 1.00 0.01 O
ATOM 24 OP2 G B 490 -16.639 -94.228 14.388 1.00 0.01 O
ATOM 25 O5' G B 490 -17.879 -92.056 14.919 1.00 0.01 O
TER
ATOM 2 P G A 488 -17.823 -93.465 5.897 1.00 0.01 P
ATOM 3 OP1 G A 488 -18.061 -92.557 4.761 1.00 0.01 O
ATOM 4 OP2 G A 488 -16.996 -94.671 5.674 1.00 0.01 O
ATOM 5 O5' G A 488 -17.267 -92.642 7.106 1.00 0.01 O
ATOM 6 C5' G A 488 -16.061 -91.941 6.961 1.00 0.01 C
ATOM 7 C4' G A 488 -15.989 -90.785 7.888 1.00 0.01 C
ATOM 8 O4' G A 488 -17.077 -89.901 7.588 1.00 0.01 O
ATOM 9 C3' G A 488 -16.116 -91.146 9.353 1.00 0.01 C
ATOM 10 O3' G A 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 11 C2' G A 488 -17.562 -90.841 9.655 1.00 0.01 C
ATOM 12 O2' G A 488 -17.789 -90.511 10.990 1.00 0.01 O
ATOM 13 C1' G A 488 -17.815 -89.655 8.748 1.00 0.01 C
ATOM 14 N9 G A 488 -19.219 -89.456 8.371 1.00 0.01 N
ATOM 15 C8 G A 488 -19.966 -90.025 7.371 1.00 0.01 C
ATOM 16 N7 G A 488 -21.196 -89.578 7.323 1.00 0.01 N
ATOM 17 C5 G A 488 -21.267 -88.656 8.349 1.00 0.01 C
ATOM 18 C6 G A 488 -22.337 -87.845 8.816 1.00 0.01 C
ATOM 19 O6 G A 488 -23.514 -87.777 8.382 1.00 0.01 O
ATOM 20 N1 G A 488 -21.916 -87.060 9.905 1.00 0.01 N
ATOM 21 C2 G A 488 -20.639 -87.065 10.443 1.00 0.01 C
ATOM 22 N2 G A 488 -20.321 -86.278 11.493 1.00 0.01 N
ATOM 23 N3 G A 488 -19.679 -87.822 9.998 1.00 0.01 N
ATOM 24 C4 G A 488 -20.056 -88.573 8.974 1.00 0.01 C
ATOM 25 P C A 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 26 OP1 C A 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 27 OP2 C A 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 28 O5' C A 489 -13.840 -91.174 11.938 1.00 4.76 O
TER
ATOM 1 O3' G B 488 -15.285 -90.293 10.122 1.00 0.01 O
ATOM 2 P C B 489 -13.760 -90.693 10.440 1.00 4.76 P
ATOM 3 OP1 C B 489 -12.949 -89.453 10.350 1.00 4.76 O
ATOM 4 OP2 C B 489 -13.414 -91.839 9.566 1.00 4.76 O
ATOM 5 O5' C B 489 -13.840 -91.174 11.938 1.00 4.76 O
ATOM 6 C5' C B 489 -14.243 -92.493 12.231 1.00 4.76 C
ATOM 7 C4' C B 489 -14.236 -92.740 13.707 1.00 4.76 C
ATOM 8 O4' C B 489 -12.869 -92.691 14.194 1.00 4.76 O
ATOM 9 C3' C B 489 -15.001 -91.715 14.524 1.00 4.76 C
ATOM 10 O3' C B 489 -15.553 -92.359 15.662 1.00 4.76 O
ATOM 11 C2' C B 489 -13.919 -90.741 14.934 1.00 4.76 C
ATOM 12 O2' C B 489 -14.228 -89.955 16.061 1.00 4.76 O
ATOM 13 C1' C B 489 -12.766 -91.697 15.195 1.00 4.76 C
ATOM 14 N1 C B 489 -11.444 -91.066 15.096 1.00 5.35 N
ATOM 15 C2 C B 489 -10.634 -91.046 16.229 1.00 5.35 C
ATOM 16 O2 C B 489 -11.011 -91.588 17.297 1.00 5.35 O
ATOM 17 N3 C B 489 -9.446 -90.424 16.105 1.00 5.35 N
ATOM 18 C4 C B 489 -9.062 -89.859 14.953 1.00 5.35 C
ATOM 19 N4 C B 489 -7.857 -89.261 14.899 1.00 5.35 N
ATOM 20 C5 C B 489 -9.884 -89.889 13.794 1.00 5.35 C
ATOM 21 C6 C B 489 -11.063 -90.493 13.918 1.00 5.35 C
ATOM 22 P G B 490 -16.902 -93.192 15.466 1.00 0.01 P
ATOM 23 OP1 G B 490 -17.358 -93.652 16.794 1.00 0.01 O
ATOM 24 OP2 G B 490 -16.639 -94.228 14.388 1.00 0.01 O
ATOM 25 O5' G B 490 -17.879 -92.056 14.919 1.00 0.01 O
TER
Atoms:
OP1: (-18.061,-92.557,4.761)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
OP2: (-16.996,-94.671,5.674)
C3': (-16.116,-91.146,9.353)
C1': (-17.815,-89.655,8.748)
C5': (-16.061,-91.941,6.961)
O6: (-23.514,-87.777,8.382)
O4': (-17.077,-89.901,7.588)
C8: (-19.966,-90.025,7.371)
C2: (-20.639,-87.065,10.443)
C6: (-22.337,-87.845,8.816)
C5: (-21.267,-88.656,8.349)
C4: (-20.056,-88.573,8.974)
P: (-17.823,-93.465,5.897)
C4': (-15.989,-90.785,7.888)
C2': (-17.562,-90.841,9.655)
O2': (-17.789,-90.511,10.990)
N1: (-21.916,-87.060,9.905)
N2: (-20.321,-86.278,11.493)
N3: (-19.679,-87.822,9.998)
N7: (-21.196,-89.578,7.323)
N9: (-19.219,-89.456,8.371)
O5': (-17.267,-92.642,7.106)
O3': (-15.285,-90.293,10.122)
C2: (-10.634,-91.046,16.229)
OP1: (-12.949,-89.453,10.350)
OP2: (-13.414,-91.839,9.566)
C4: (-9.062,-89.859,14.953)
O5': (-13.840,-91.174,11.938)
C3': (-15.001,-91.715,14.524)
C1': (-12.766,-91.697,15.195)
O4': (-12.869,-92.691,14.194)
C5': (-14.243,-92.493,12.231)
P: (-13.760,-90.693,10.440)
O2: (-11.011,-91.588,17.297)
C4': (-14.236,-92.740,13.707)
C2': (-13.919,-90.741,14.934)
O2': (-14.228,-89.955,16.061)
N1: (-11.444,-91.066,15.096)
N3: (-9.446,-90.424,16.105)
N4: (-7.857,-89.261,14.899)
C6: (-11.063,-90.493,13.918)
C5: (-9.884,-89.889,13.794)
O3': (-15.553,-92.359,15.662)
OP1: (-12.949,-89.453,10.350)
OP2: (-13.414,-91.839,9.566)
C4: (-9.062,-89.859,14.953)
O5': (-13.840,-91.174,11.938)
C3': (-15.001,-91.715,14.524)
C1': (-12.766,-91.697,15.195)
O4': (-12.869,-92.691,14.194)
C5': (-14.243,-92.493,12.231)
P: (-13.760,-90.693,10.440)
O2: (-11.011,-91.588,17.297)
C4': (-14.236,-92.740,13.707)
C2': (-13.919,-90.741,14.934)
O2': (-14.228,-89.955,16.061)
N1: (-11.444,-91.066,15.096)
N3: (-9.446,-90.424,16.105)
N4: (-7.857,-89.261,14.899)
C6: (-11.063,-90.493,13.918)
C5: (-9.884,-89.889,13.794)
O3': (-15.553,-92.359,15.662)
Image (generated by PyMOL):