Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:436:437
Extra
PDB:
ATOM 1 O3' G A 35 59.433 -6.624 132.991 1.00 48.49 O
ATOM 2 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 3 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 4 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 5 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
ATOM 6 C5' A A 36 57.163 -5.755 134.952 1.00 57.59 C
ATOM 7 C4' A A 36 56.363 -5.506 136.199 1.00 58.25 C
ATOM 8 O4' A A 36 55.017 -5.125 135.834 1.00 57.96 O
ATOM 9 C3' A A 36 56.236 -6.690 137.136 1.00 58.67 C
ATOM 10 O3' A A 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 11 C2' A A 36 54.867 -7.249 136.805 1.00 58.31 C
ATOM 12 O2' A A 36 54.253 -7.920 137.871 1.00 58.83 O
ATOM 13 C1' A A 36 54.090 -6.003 136.424 1.00 58.15 C
ATOM 14 N9 A A 36 53.034 -6.245 135.439 1.00 57.48 N
ATOM 15 C8 A A 36 51.702 -5.952 135.507 1.00 57.48 C
ATOM 16 N7 A A 36 51.034 -6.267 134.426 1.00 56.80 N
ATOM 17 C5 A A 36 51.980 -6.817 133.582 1.00 56.33 C
ATOM 18 C6 A A 36 51.913 -7.344 132.282 1.00 55.57 C
ATOM 19 N6 A A 36 50.808 -7.418 131.571 1.00 55.13 N
ATOM 20 N1 A A 36 53.026 -7.803 131.704 1.00 55.28 N
ATOM 21 C2 A A 36 54.149 -7.712 132.415 1.00 55.75 C
ATOM 22 N3 A A 36 54.364 -7.239 133.654 1.00 56.48 N
ATOM 23 C4 A A 36 53.214 -6.804 134.195 1.00 56.74 C
ATOM 24 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 25 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 26 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 27 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
TER
ATOM 1 O3' A B 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 2 P U B 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 3 OP1 U B 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 4 OP2 U B 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 5 O5' U B 37 58.597 -6.012 139.223 1.00 54.90 O
ATOM 6 C5' U B 37 58.606 -4.586 139.162 1.00 55.03 C
ATOM 7 C4' U B 37 59.953 -4.054 138.741 1.00 55.00 C
ATOM 8 O4' U B 37 60.975 -4.598 139.620 1.00 55.60 O
ATOM 9 C3' U B 37 60.379 -4.413 137.325 1.00 54.16 C
ATOM 10 O3' U B 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 11 C2' U B 37 61.249 -5.647 137.557 1.00 54.28 C
ATOM 12 O2' U B 37 62.152 -5.954 136.521 1.00 53.77 O
ATOM 13 C1' U B 37 61.954 -5.264 138.856 1.00 55.20 C
ATOM 14 N1 U B 37 62.442 -6.416 139.641 1.00 55.62 N
ATOM 15 C2 U B 37 63.802 -6.757 139.700 1.00 55.83 C
ATOM 16 O2 U B 37 64.725 -6.193 139.153 1.00 55.72 O
ATOM 17 N3 U B 37 64.098 -7.854 140.428 1.00 56.22 N
ATOM 18 C4 U B 37 63.198 -8.633 141.093 1.00 56.41 C
ATOM 19 O4 U B 37 63.607 -9.603 141.718 1.00 56.77 O
ATOM 20 C5 U B 37 61.843 -8.218 140.992 1.00 56.18 C
ATOM 21 C6 U B 37 61.509 -7.150 140.287 1.00 55.80 C
ATOM 22 P G B 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 23 OP1 G B 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 24 OP2 G B 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 25 O5' G B 38 59.305 -2.523 135.368 1.00 51.58 O
TER
ATOM 2 P A A 36 59.132 -7.391 134.381 1.00 57.33 P
ATOM 3 OP1 A A 36 60.422 -7.769 134.968 1.00 57.80 O
ATOM 4 OP2 A A 36 58.152 -8.466 134.112 1.00 56.99 O
ATOM 5 O5' A A 36 58.459 -6.243 135.262 1.00 57.86 O
ATOM 6 C5' A A 36 57.163 -5.755 134.952 1.00 57.59 C
ATOM 7 C4' A A 36 56.363 -5.506 136.199 1.00 58.25 C
ATOM 8 O4' A A 36 55.017 -5.125 135.834 1.00 57.96 O
ATOM 9 C3' A A 36 56.236 -6.690 137.136 1.00 58.67 C
ATOM 10 O3' A A 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 11 C2' A A 36 54.867 -7.249 136.805 1.00 58.31 C
ATOM 12 O2' A A 36 54.253 -7.920 137.871 1.00 58.83 O
ATOM 13 C1' A A 36 54.090 -6.003 136.424 1.00 58.15 C
ATOM 14 N9 A A 36 53.034 -6.245 135.439 1.00 57.48 N
ATOM 15 C8 A A 36 51.702 -5.952 135.507 1.00 57.48 C
ATOM 16 N7 A A 36 51.034 -6.267 134.426 1.00 56.80 N
ATOM 17 C5 A A 36 51.980 -6.817 133.582 1.00 56.33 C
ATOM 18 C6 A A 36 51.913 -7.344 132.282 1.00 55.57 C
ATOM 19 N6 A A 36 50.808 -7.418 131.571 1.00 55.13 N
ATOM 20 N1 A A 36 53.026 -7.803 131.704 1.00 55.28 N
ATOM 21 C2 A A 36 54.149 -7.712 132.415 1.00 55.75 C
ATOM 22 N3 A A 36 54.364 -7.239 133.654 1.00 56.48 N
ATOM 23 C4 A A 36 53.214 -6.804 134.195 1.00 56.74 C
ATOM 24 P U A 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 25 OP1 U A 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 26 OP2 U A 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 27 O5' U A 37 58.597 -6.012 139.223 1.00 54.90 O
TER
ATOM 1 O3' A B 36 56.228 -6.225 138.465 1.00 59.51 O
ATOM 2 P U B 37 57.261 -6.821 139.535 1.00 54.86 P
ATOM 3 OP1 U B 37 57.449 -8.254 139.202 1.00 54.54 O
ATOM 4 OP2 U B 37 56.749 -6.447 140.892 1.00 55.69 O
ATOM 5 O5' U B 37 58.597 -6.012 139.223 1.00 54.90 O
ATOM 6 C5' U B 37 58.606 -4.586 139.162 1.00 55.03 C
ATOM 7 C4' U B 37 59.953 -4.054 138.741 1.00 55.00 C
ATOM 8 O4' U B 37 60.975 -4.598 139.620 1.00 55.60 O
ATOM 9 C3' U B 37 60.379 -4.413 137.325 1.00 54.16 C
ATOM 10 O3' U B 37 61.165 -3.344 136.789 1.00 54.08 O
ATOM 11 C2' U B 37 61.249 -5.647 137.557 1.00 54.28 C
ATOM 12 O2' U B 37 62.152 -5.954 136.521 1.00 53.77 O
ATOM 13 C1' U B 37 61.954 -5.264 138.856 1.00 55.20 C
ATOM 14 N1 U B 37 62.442 -6.416 139.641 1.00 55.62 N
ATOM 15 C2 U B 37 63.802 -6.757 139.700 1.00 55.83 C
ATOM 16 O2 U B 37 64.725 -6.193 139.153 1.00 55.72 O
ATOM 17 N3 U B 37 64.098 -7.854 140.428 1.00 56.22 N
ATOM 18 C4 U B 37 63.198 -8.633 141.093 1.00 56.41 C
ATOM 19 O4 U B 37 63.607 -9.603 141.718 1.00 56.77 O
ATOM 20 C5 U B 37 61.843 -8.218 140.992 1.00 56.18 C
ATOM 21 C6 U B 37 61.509 -7.150 140.287 1.00 55.80 C
ATOM 22 P G B 38 60.449 -1.983 136.289 1.00 52.34 P
ATOM 23 OP1 G B 38 61.425 -1.252 135.494 1.00 52.12 O
ATOM 24 OP2 G B 38 59.841 -1.320 137.445 1.00 53.05 O
ATOM 25 O5' G B 38 59.305 -2.523 135.368 1.00 51.58 O
TER
Atoms:
OP1: (60.422,-7.769,134.968)
OP2: (58.152,-8.466,134.112)
C3': (56.236,-6.690,137.136)
C1': (54.090,-6.003,136.424)
C5': (57.163,-5.755,134.952)
O4': (55.017,-5.125,135.834)
C8: (51.702,-5.952,135.507)
O2': (54.253,-7.920,137.871)
C6: (51.913,-7.344,132.282)
C5: (51.980,-6.817,133.582)
C4: (53.214,-6.804,134.195)
P: (59.132,-7.391,134.381)
C4': (56.363,-5.506,136.199)
C2': (54.867,-7.249,136.805)
C2: (54.149,-7.712,132.415)
N1: (53.026,-7.803,131.704)
N3: (54.364,-7.239,133.654)
N6: (50.808,-7.418,131.571)
N7: (51.034,-6.267,134.426)
N9: (53.034,-6.245,135.439)
O5': (58.459,-6.243,135.262)
O3': (56.228,-6.225,138.465)
OP2: (58.152,-8.466,134.112)
C3': (56.236,-6.690,137.136)
C1': (54.090,-6.003,136.424)
C5': (57.163,-5.755,134.952)
O4': (55.017,-5.125,135.834)
C8: (51.702,-5.952,135.507)
O2': (54.253,-7.920,137.871)
C6: (51.913,-7.344,132.282)
C5: (51.980,-6.817,133.582)
C4: (53.214,-6.804,134.195)
P: (59.132,-7.391,134.381)
C4': (56.363,-5.506,136.199)
C2': (54.867,-7.249,136.805)
C2: (54.149,-7.712,132.415)
N1: (53.026,-7.803,131.704)
N3: (54.364,-7.239,133.654)
N6: (50.808,-7.418,131.571)
N7: (51.034,-6.267,134.426)
N9: (53.034,-6.245,135.439)
O5': (58.459,-6.243,135.262)
O3': (56.228,-6.225,138.465)
C4: (63.198,-8.633,141.093)
N3: (64.098,-7.854,140.428)
OP1: (57.449,-8.254,139.202)
OP2: (56.749,-6.447,140.892)
C2: (63.802,-6.757,139.700)
C1': (61.954,-5.264,138.856)
C3': (60.379,-4.413,137.325)
O5': (58.597,-6.012,139.223)
O4': (60.975,-4.598,139.620)
C5': (58.606,-4.586,139.162)
P: (57.261,-6.821,139.535)
C4': (59.953,-4.054,138.741)
C2': (61.249,-5.647,137.557)
O2': (62.152,-5.954,136.521)
N1: (62.442,-6.416,139.641)
O4: (63.607,-9.603,141.718)
O2: (64.725,-6.193,139.153)
C6: (61.509,-7.150,140.287)
C5: (61.843,-8.218,140.992)
O3': (61.165,-3.344,136.789)
N3: (64.098,-7.854,140.428)
OP1: (57.449,-8.254,139.202)
OP2: (56.749,-6.447,140.892)
C2: (63.802,-6.757,139.700)
C1': (61.954,-5.264,138.856)
C3': (60.379,-4.413,137.325)
O5': (58.597,-6.012,139.223)
O4': (60.975,-4.598,139.620)
C5': (58.606,-4.586,139.162)
P: (57.261,-6.821,139.535)
C4': (59.953,-4.054,138.741)
C2': (61.249,-5.647,137.557)
O2': (62.152,-5.954,136.521)
N1: (62.442,-6.416,139.641)
O4: (63.607,-9.603,141.718)
O2: (64.725,-6.193,139.153)
C6: (61.509,-7.150,140.287)
C5: (61.843,-8.218,140.992)
O3': (61.165,-3.344,136.789)
Image (generated by PyMOL):