Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5O:E56:E57
Extra
PDB:
ATOM 1 O3' U A 55 10.809 10.047 120.243 1.00 77.17 O
ATOM 2 P A A 56 10.207 11.528 120.273 1.00 61.24 P
ATOM 3 OP1 A A 56 11.334 12.491 120.309 1.00 56.26 O
ATOM 4 OP2 A A 56 9.200 11.534 121.363 1.00 70.69 O
ATOM 5 O5' A A 56 9.448 11.668 118.873 1.00 58.00 O
ATOM 6 C5' A A 56 8.713 12.853 118.562 1.00 56.12 C
ATOM 7 C4' A A 56 7.757 12.611 117.414 1.00 49.41 C
ATOM 8 O4' A A 56 6.879 13.753 117.297 1.00 60.68 O
ATOM 9 C3' A A 56 8.474 12.490 116.076 1.00 47.54 C
ATOM 10 O3' A A 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 11 C2' A A 56 8.403 13.878 115.444 1.00 53.41 C
ATOM 12 O2' A A 56 8.125 13.819 114.064 1.00 57.97 O
ATOM 13 C1' A A 56 7.159 14.453 116.113 1.00 57.38 C
ATOM 14 N9 A A 56 7.071 15.885 116.363 1.00 66.21 N
ATOM 15 C8 A A 56 6.055 16.705 115.942 1.00 65.88 C
ATOM 16 N7 A A 56 6.207 17.954 116.289 1.00 66.92 N
ATOM 17 C5 A A 56 7.404 17.960 116.988 1.00 68.23 C
ATOM 18 C6 A A 56 8.116 18.984 117.614 1.00 69.96 C
ATOM 19 N6 A A 56 7.707 20.252 117.638 1.00 68.99 N
ATOM 20 N1 A A 56 9.277 18.659 118.224 1.00 72.14 N
ATOM 21 C2 A A 56 9.678 17.384 118.197 1.00 70.03 C
ATOM 22 N3 A A 56 9.092 16.329 117.638 1.00 67.41 N
ATOM 23 C4 A A 56 7.947 16.690 117.042 1.00 66.08 C
ATOM 24 P U A 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 25 OP1 U A 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 26 OP2 U A 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 27 O5' U A 57 7.731 9.379 116.647 1.00 59.01 O
TER
ATOM 1 O3' A B 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 2 P U B 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 3 OP1 U B 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 4 OP2 U B 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 5 O5' U B 57 7.731 9.379 116.647 1.00 59.01 O
ATOM 6 C5' U B 57 6.434 8.778 116.605 1.00 50.33 C
ATOM 7 C4' U B 57 6.226 7.861 117.798 1.00 64.59 C
ATOM 8 O4' U B 57 7.159 6.754 117.725 1.00 66.95 O
ATOM 9 C3' U B 57 6.526 8.582 119.109 1.00 61.41 C
ATOM 10 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 11 C2' U B 57 7.954 8.190 119.480 1.00 61.26 C
ATOM 12 O2' U B 57 8.088 7.960 120.863 1.00 65.00 O
ATOM 13 C1' U B 57 8.096 6.843 118.773 1.00 62.29 C
ATOM 14 N1 U B 57 9.421 6.423 118.299 1.00 69.91 N
ATOM 15 C2 U B 57 10.233 5.758 119.208 1.00 72.63 C
ATOM 16 O2 U B 57 9.897 5.539 120.363 1.00 73.86 O
ATOM 17 N3 U B 57 11.446 5.355 118.715 1.00 71.39 N
ATOM 18 C4 U B 57 11.923 5.541 117.438 1.00 74.64 C
ATOM 19 O4 U B 57 13.038 5.111 117.145 1.00 75.73 O
ATOM 20 C5 U B 57 11.032 6.244 116.559 1.00 73.63 C
ATOM 21 C6 U B 57 9.840 6.654 117.012 1.00 71.77 C
ATOM 22 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 23 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 24 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 25 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
TER
ATOM 2 P A A 56 10.207 11.528 120.273 1.00 61.24 P
ATOM 3 OP1 A A 56 11.334 12.491 120.309 1.00 56.26 O
ATOM 4 OP2 A A 56 9.200 11.534 121.363 1.00 70.69 O
ATOM 5 O5' A A 56 9.448 11.668 118.873 1.00 58.00 O
ATOM 6 C5' A A 56 8.713 12.853 118.562 1.00 56.12 C
ATOM 7 C4' A A 56 7.757 12.611 117.414 1.00 49.41 C
ATOM 8 O4' A A 56 6.879 13.753 117.297 1.00 60.68 O
ATOM 9 C3' A A 56 8.474 12.490 116.076 1.00 47.54 C
ATOM 10 O3' A A 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 11 C2' A A 56 8.403 13.878 115.444 1.00 53.41 C
ATOM 12 O2' A A 56 8.125 13.819 114.064 1.00 57.97 O
ATOM 13 C1' A A 56 7.159 14.453 116.113 1.00 57.38 C
ATOM 14 N9 A A 56 7.071 15.885 116.363 1.00 66.21 N
ATOM 15 C8 A A 56 6.055 16.705 115.942 1.00 65.88 C
ATOM 16 N7 A A 56 6.207 17.954 116.289 1.00 66.92 N
ATOM 17 C5 A A 56 7.404 17.960 116.988 1.00 68.23 C
ATOM 18 C6 A A 56 8.116 18.984 117.614 1.00 69.96 C
ATOM 19 N6 A A 56 7.707 20.252 117.638 1.00 68.99 N
ATOM 20 N1 A A 56 9.277 18.659 118.224 1.00 72.14 N
ATOM 21 C2 A A 56 9.678 17.384 118.197 1.00 70.03 C
ATOM 22 N3 A A 56 9.092 16.329 117.638 1.00 67.41 N
ATOM 23 C4 A A 56 7.947 16.690 117.042 1.00 66.08 C
ATOM 24 P U A 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 25 OP1 U A 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 26 OP2 U A 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 27 O5' U A 57 7.731 9.379 116.647 1.00 59.01 O
TER
ATOM 1 O3' A B 56 7.898 11.483 115.249 1.00 51.45 O
ATOM 2 P U B 57 8.413 9.971 115.328 1.00 58.41 P
ATOM 3 OP1 U B 57 9.885 9.981 115.510 1.00 77.00 O
ATOM 4 OP2 U B 57 7.824 9.303 114.140 1.00 69.37 O
ATOM 5 O5' U B 57 7.731 9.379 116.647 1.00 59.01 O
ATOM 6 C5' U B 57 6.434 8.778 116.605 1.00 50.33 C
ATOM 7 C4' U B 57 6.226 7.861 117.798 1.00 64.59 C
ATOM 8 O4' U B 57 7.159 6.754 117.725 1.00 66.95 O
ATOM 9 C3' U B 57 6.526 8.582 119.109 1.00 61.41 C
ATOM 10 O3' U B 57 5.578 8.325 120.145 1.00 76.84 O
ATOM 11 C2' U B 57 7.954 8.190 119.480 1.00 61.26 C
ATOM 12 O2' U B 57 8.088 7.960 120.863 1.00 65.00 O
ATOM 13 C1' U B 57 8.096 6.843 118.773 1.00 62.29 C
ATOM 14 N1 U B 57 9.421 6.423 118.299 1.00 69.91 N
ATOM 15 C2 U B 57 10.233 5.758 119.208 1.00 72.63 C
ATOM 16 O2 U B 57 9.897 5.539 120.363 1.00 73.86 O
ATOM 17 N3 U B 57 11.446 5.355 118.715 1.00 71.39 N
ATOM 18 C4 U B 57 11.923 5.541 117.438 1.00 74.64 C
ATOM 19 O4 U B 57 13.038 5.111 117.145 1.00 75.73 O
ATOM 20 C5 U B 57 11.032 6.244 116.559 1.00 73.63 C
ATOM 21 C6 U B 57 9.840 6.654 117.012 1.00 71.77 C
ATOM 22 P A B 58 4.133 9.024 120.129 1.00 65.79 P
ATOM 23 OP1 A B 58 3.327 8.361 121.182 1.00 75.90 O
ATOM 24 OP2 A B 58 3.633 9.044 118.730 1.00 72.36 O
ATOM 25 O5' A B 58 4.422 10.520 120.589 1.00 69.55 O
TER
Atoms:
OP1: (11.334,12.491,120.309)
OP2: (9.200,11.534,121.363)
C3': (8.474,12.490,116.076)
C1': (7.159,14.453,116.113)
C5': (8.713,12.853,118.562)
O4': (6.879,13.753,117.297)
C8: (6.055,16.705,115.942)
O2': (8.125,13.819,114.064)
C6: (8.116,18.984,117.614)
C5: (7.404,17.960,116.988)
C4: (7.947,16.690,117.042)
P: (10.207,11.528,120.273)
C4': (7.757,12.611,117.414)
C2': (8.403,13.878,115.444)
C2: (9.678,17.384,118.197)
N1: (9.277,18.659,118.224)
N3: (9.092,16.329,117.638)
N6: (7.707,20.252,117.638)
N7: (6.207,17.954,116.289)
N9: (7.071,15.885,116.363)
O5': (9.448,11.668,118.873)
O3': (7.898,11.483,115.249)
OP2: (9.200,11.534,121.363)
C3': (8.474,12.490,116.076)
C1': (7.159,14.453,116.113)
C5': (8.713,12.853,118.562)
O4': (6.879,13.753,117.297)
C8: (6.055,16.705,115.942)
O2': (8.125,13.819,114.064)
C6: (8.116,18.984,117.614)
C5: (7.404,17.960,116.988)
C4: (7.947,16.690,117.042)
P: (10.207,11.528,120.273)
C4': (7.757,12.611,117.414)
C2': (8.403,13.878,115.444)
C2: (9.678,17.384,118.197)
N1: (9.277,18.659,118.224)
N3: (9.092,16.329,117.638)
N6: (7.707,20.252,117.638)
N7: (6.207,17.954,116.289)
N9: (7.071,15.885,116.363)
O5': (9.448,11.668,118.873)
O3': (7.898,11.483,115.249)
C4: (11.923,5.541,117.438)
N3: (11.446,5.355,118.715)
OP1: (9.885,9.981,115.510)
OP2: (7.824,9.303,114.140)
C2: (10.233,5.758,119.208)
C1': (8.096,6.843,118.773)
C3': (6.526,8.582,119.109)
O5': (7.731,9.379,116.647)
O4': (7.159,6.754,117.725)
C5': (6.434,8.778,116.605)
P: (8.413,9.971,115.328)
C4': (6.226,7.861,117.798)
C2': (7.954,8.190,119.480)
O2': (8.088,7.960,120.863)
N1: (9.421,6.423,118.299)
O4: (13.038,5.111,117.145)
O2: (9.897,5.539,120.363)
C6: (9.840,6.654,117.012)
C5: (11.032,6.244,116.559)
O3': (5.578,8.325,120.145)
N3: (11.446,5.355,118.715)
OP1: (9.885,9.981,115.510)
OP2: (7.824,9.303,114.140)
C2: (10.233,5.758,119.208)
C1': (8.096,6.843,118.773)
C3': (6.526,8.582,119.109)
O5': (7.731,9.379,116.647)
O4': (7.159,6.754,117.725)
C5': (6.434,8.778,116.605)
P: (8.413,9.971,115.328)
C4': (6.226,7.861,117.798)
C2': (7.954,8.190,119.480)
O2': (8.088,7.960,120.863)
N1: (9.421,6.423,118.299)
O4: (13.038,5.111,117.145)
O2: (9.897,5.539,120.363)
C6: (9.840,6.654,117.012)
C5: (11.032,6.244,116.559)
O3': (5.578,8.325,120.145)
Image (generated by PyMOL):