ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQN:057:058

Extra

PDB:
ATOM 1 O3' G A 56 60.397 159.085 29.293 1.00 51.85 O
ATOM 2 P A A 57 60.205 160.128 28.083 1.00 49.58 P
ATOM 3 OP1 A A 57 59.291 159.530 27.075 1.00 50.38 O
ATOM 4 OP2 A A 57 61.553 160.578 27.676 1.00 49.28 O
ATOM 5 O5' A A 57 59.430 161.360 28.739 1.00 50.60 O
ATOM 6 C5' A A 57 59.881 161.960 29.973 1.00 50.36 C
ATOM 7 C4' A A 57 60.285 163.404 29.744 1.00 51.50 C
ATOM 8 O4' A A 57 60.743 163.974 31.005 1.00 52.56 O
ATOM 9 C3' A A 57 61.445 163.592 28.773 1.00 50.45 C
ATOM 10 O3' A A 57 61.351 164.878 28.160 1.00 48.46 O
ATOM 11 C2' A A 57 62.647 163.519 29.705 1.00 51.10 C
ATOM 12 O2' A A 57 63.818 164.101 29.189 1.00 53.75 O
ATOM 13 C1' A A 57 62.126 164.280 30.922 1.00 52.75 C
ATOM 14 N9 A A 57 62.754 163.865 32.177 1.00 55.04 N
ATOM 15 C8 A A 57 63.379 164.651 33.114 1.00 54.96 C
ATOM 16 N7 A A 57 63.838 163.980 34.144 1.00 55.14 N
ATOM 17 C5 A A 57 63.496 162.663 33.863 1.00 54.76 C
ATOM 18 C6 A A 57 63.704 161.461 34.558 1.00 54.30 C
ATOM 19 N6 A A 57 64.338 161.376 35.728 1.00 52.23 N
ATOM 20 N1 A A 57 63.231 160.328 34.001 1.00 55.50 N
ATOM 21 C2 A A 57 62.599 160.406 32.827 1.00 54.73 C
ATOM 22 N3 A A 57 62.346 161.469 32.079 1.00 54.26 N
ATOM 23 C4 A A 57 62.827 162.579 32.658 1.00 54.51 C
ATOM 24 P U A 58 61.251 165.001 26.557 1.00 47.14 P
ATOM 25 OP1 U A 58 62.186 164.016 25.950 1.00 45.55 O
ATOM 26 OP2 U A 58 61.383 166.430 26.223 1.00 47.78 O
ATOM 27 O5' U A 58 59.745 164.579 26.237 1.00 47.03 O
TER

ATOM 1 O3' A B 57 61.351 164.878 28.160 1.00 48.46 O
ATOM 2 P U B 58 61.251 165.001 26.557 1.00 47.14 P
ATOM 3 OP1 U B 58 62.186 164.016 25.950 1.00 45.55 O
ATOM 4 OP2 U B 58 61.383 166.430 26.223 1.00 47.78 O
ATOM 5 O5' U B 58 59.745 164.579 26.237 1.00 47.03 O
ATOM 6 C5' U B 58 58.661 165.510 26.433 1.00 48.04 C
ATOM 7 C4' U B 58 57.333 164.856 26.108 1.00 50.11 C
ATOM 8 O4' U B 58 57.360 164.371 24.734 1.00 51.66 O
ATOM 9 C3' U B 58 56.934 163.649 26.961 1.00 50.64 C
ATOM 10 O3' U B 58 55.507 163.603 27.008 1.00 50.68 O
ATOM 11 C2' U B 58 57.420 162.482 26.107 1.00 50.34 C
ATOM 12 O2' U B 58 56.742 161.278 26.376 1.00 48.50 O
ATOM 13 C1' U B 58 57.041 162.994 24.721 1.00 52.05 C
ATOM 14 N1 U B 58 57.679 162.348 23.563 1.00 51.62 N
ATOM 15 C2 U B 58 56.877 161.544 22.768 1.00 50.93 C
ATOM 16 O2 U B 58 55.697 161.330 23.010 1.00 50.97 O
ATOM 17 N3 U B 58 57.505 160.994 21.680 1.00 49.89 N
ATOM 18 C4 U B 58 58.825 161.140 21.320 1.00 52.29 C
ATOM 19 O4 U B 58 59.245 160.569 20.309 1.00 53.27 O
ATOM 20 C5 U B 58 59.595 161.973 22.199 1.00 52.63 C
ATOM 21 C6 U B 58 59.009 162.537 23.262 1.00 51.40 C
ATOM 22 P A B 59 54.729 163.989 28.356 1.00 52.39 P
ATOM 23 OP1 A B 59 53.371 164.490 28.009 1.00 52.04 O
ATOM 24 OP2 A B 59 55.632 164.834 29.169 1.00 51.99 O
ATOM 25 O5' A B 59 54.507 162.584 29.077 1.00 53.98 O
TER

Atoms:
OP1: (59.291,159.530,27.075)
OP2: (61.553,160.578,27.676)
C3': (61.445,163.592,28.773)
C1': (62.126,164.280,30.922)
C5': (59.881,161.960,29.973)
O4': (60.743,163.974,31.005)
C8: (63.379,164.651,33.114)
O2': (63.818,164.101,29.189)
C6: (63.704,161.461,34.558)
C5: (63.496,162.663,33.863)
C4: (62.827,162.579,32.658)
P: (60.205,160.128,28.083)
C4': (60.285,163.404,29.744)
C2': (62.647,163.519,29.705)
C2: (62.599,160.406,32.827)
N1: (63.231,160.328,34.001)
N3: (62.346,161.469,32.079)
N6: (64.338,161.376,35.728)
N7: (63.838,163.980,34.144)
N9: (62.754,163.865,32.177)
O5': (59.430,161.360,28.739)
O3': (61.351,164.878,28.160)
C4: (58.825,161.140,21.320)
N3: (57.505,160.994,21.680)
OP1: (62.186,164.016,25.950)
OP2: (61.383,166.430,26.223)
C2: (56.877,161.544,22.768)
C1': (57.041,162.994,24.721)
C3': (56.934,163.649,26.961)
O5': (59.745,164.579,26.237)
O4': (57.360,164.371,24.734)
C5': (58.661,165.510,26.433)
P: (61.251,165.001,26.557)
C4': (57.333,164.856,26.108)
C2': (57.420,162.482,26.107)
O2': (56.742,161.278,26.376)
N1: (57.679,162.348,23.563)
O4: (59.245,160.569,20.309)
O2: (55.697,161.330,23.010)
C6: (59.009,162.537,23.262)
C5: (59.595,161.973,22.199)
O3': (55.507,163.603,27.008)
Image (generated by PyMOL):
PyMOL image
show in jmol