Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:057:058
Extra
PDB:
ATOM 1 O3' G A 56 60.816 159.789 29.288 1.00 45.75 O
ATOM 2 P A A 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 3 OP1 A A 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 4 OP2 A A 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 5 O5' A A 57 59.906 162.048 28.640 1.00 44.42 O
ATOM 6 C5' A A 57 60.319 162.662 29.871 1.00 44.77 C
ATOM 7 C4' A A 57 60.776 164.082 29.625 1.00 46.22 C
ATOM 8 O4' A A 57 61.228 164.649 30.886 1.00 46.29 O
ATOM 9 C3' A A 57 61.955 164.224 28.669 1.00 46.34 C
ATOM 10 O3' A A 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 11 C2' A A 57 63.140 164.142 29.621 1.00 47.06 C
ATOM 12 O2' A A 57 64.319 164.711 29.104 1.00 50.46 O
ATOM 13 C1' A A 57 62.611 164.934 30.816 1.00 47.54 C
ATOM 14 N9 A A 57 63.213 164.575 32.103 1.00 50.61 N
ATOM 15 C8 A A 57 63.833 165.417 32.994 1.00 51.09 C
ATOM 16 N7 A A 57 64.277 164.817 34.070 1.00 51.07 N
ATOM 17 C5 A A 57 63.929 163.488 33.877 1.00 51.23 C
ATOM 18 C6 A A 57 64.135 162.338 34.653 1.00 51.55 C
ATOM 19 N6 A A 57 64.759 162.344 35.830 1.00 50.12 N
ATOM 20 N1 A A 57 63.674 161.164 34.170 1.00 52.46 N
ATOM 21 C2 A A 57 63.046 161.160 32.987 1.00 52.33 C
ATOM 22 N3 A A 57 62.792 162.173 32.166 1.00 51.03 N
ATOM 23 C4 A A 57 63.269 163.324 32.673 1.00 51.12 C
ATOM 24 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 25 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 26 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 27 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
TER
ATOM 1 O3' A B 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 2 P U B 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 3 OP1 U B 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 4 OP2 U B 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 5 O5' U B 58 60.332 165.221 26.100 1.00 43.44 O
ATOM 6 C5' U B 58 59.259 166.169 26.238 1.00 42.40 C
ATOM 7 C4' U B 58 57.930 165.514 25.945 1.00 43.79 C
ATOM 8 O4' U B 58 57.932 164.993 24.587 1.00 45.04 O
ATOM 9 C3' U B 58 57.540 164.339 26.835 1.00 44.31 C
ATOM 10 O3' U B 58 56.112 164.317 26.926 1.00 44.23 O
ATOM 11 C2' U B 58 58.014 163.150 26.010 1.00 44.37 C
ATOM 12 O2' U B 58 57.368 161.946 26.350 1.00 46.54 O
ATOM 13 C1' U B 58 57.618 163.617 24.613 1.00 44.63 C
ATOM 14 N1 U B 58 58.278 162.957 23.478 1.00 44.45 N
ATOM 15 C2 U B 58 57.521 162.068 22.726 1.00 44.56 C
ATOM 16 O2 U B 58 56.358 161.794 22.986 1.00 44.84 O
ATOM 17 N3 U B 58 58.178 161.502 21.662 1.00 44.48 N
ATOM 18 C4 U B 58 59.490 161.715 21.287 1.00 45.38 C
ATOM 19 O4 U B 58 59.952 161.098 20.327 1.00 44.26 O
ATOM 20 C5 U B 58 60.208 162.637 22.117 1.00 45.25 C
ATOM 21 C6 U B 58 59.593 163.212 23.158 1.00 45.10 C
ATOM 22 P A B 59 55.385 164.672 28.316 1.00 45.73 P
ATOM 23 OP1 A B 59 54.084 165.315 28.020 1.00 48.14 O
ATOM 24 OP2 A B 59 56.365 165.383 29.187 1.00 46.77 O
ATOM 25 O5' A B 59 55.052 163.239 28.931 1.00 45.79 O
TER
ATOM 2 P A A 57 60.697 160.801 28.045 1.00 44.28 P
ATOM 3 OP1 A A 57 59.838 160.187 27.001 1.00 41.78 O
ATOM 4 OP2 A A 57 62.069 161.248 27.706 1.00 41.11 O
ATOM 5 O5' A A 57 59.906 162.048 28.640 1.00 44.42 O
ATOM 6 C5' A A 57 60.319 162.662 29.871 1.00 44.77 C
ATOM 7 C4' A A 57 60.776 164.082 29.625 1.00 46.22 C
ATOM 8 O4' A A 57 61.228 164.649 30.886 1.00 46.29 O
ATOM 9 C3' A A 57 61.955 164.224 28.669 1.00 46.34 C
ATOM 10 O3' A A 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 11 C2' A A 57 63.140 164.142 29.621 1.00 47.06 C
ATOM 12 O2' A A 57 64.319 164.711 29.104 1.00 50.46 O
ATOM 13 C1' A A 57 62.611 164.934 30.816 1.00 47.54 C
ATOM 14 N9 A A 57 63.213 164.575 32.103 1.00 50.61 N
ATOM 15 C8 A A 57 63.833 165.417 32.994 1.00 51.09 C
ATOM 16 N7 A A 57 64.277 164.817 34.070 1.00 51.07 N
ATOM 17 C5 A A 57 63.929 163.488 33.877 1.00 51.23 C
ATOM 18 C6 A A 57 64.135 162.338 34.653 1.00 51.55 C
ATOM 19 N6 A A 57 64.759 162.344 35.830 1.00 50.12 N
ATOM 20 N1 A A 57 63.674 161.164 34.170 1.00 52.46 N
ATOM 21 C2 A A 57 63.046 161.160 32.987 1.00 52.33 C
ATOM 22 N3 A A 57 62.792 162.173 32.166 1.00 51.03 N
ATOM 23 C4 A A 57 63.269 163.324 32.673 1.00 51.12 C
ATOM 24 P U A 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 25 OP1 U A 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 26 OP2 U A 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 27 O5' U A 58 60.332 165.221 26.100 1.00 43.44 O
TER
ATOM 1 O3' A B 57 61.902 165.513 28.047 1.00 46.03 O
ATOM 2 P U B 58 61.831 165.639 26.445 1.00 44.41 P
ATOM 3 OP1 U B 58 62.778 164.670 25.834 1.00 40.93 O
ATOM 4 OP2 U B 58 61.961 167.083 26.126 1.00 44.76 O
ATOM 5 O5' U B 58 60.332 165.221 26.100 1.00 43.44 O
ATOM 6 C5' U B 58 59.259 166.169 26.238 1.00 42.40 C
ATOM 7 C4' U B 58 57.930 165.514 25.945 1.00 43.79 C
ATOM 8 O4' U B 58 57.932 164.993 24.587 1.00 45.04 O
ATOM 9 C3' U B 58 57.540 164.339 26.835 1.00 44.31 C
ATOM 10 O3' U B 58 56.112 164.317 26.926 1.00 44.23 O
ATOM 11 C2' U B 58 58.014 163.150 26.010 1.00 44.37 C
ATOM 12 O2' U B 58 57.368 161.946 26.350 1.00 46.54 O
ATOM 13 C1' U B 58 57.618 163.617 24.613 1.00 44.63 C
ATOM 14 N1 U B 58 58.278 162.957 23.478 1.00 44.45 N
ATOM 15 C2 U B 58 57.521 162.068 22.726 1.00 44.56 C
ATOM 16 O2 U B 58 56.358 161.794 22.986 1.00 44.84 O
ATOM 17 N3 U B 58 58.178 161.502 21.662 1.00 44.48 N
ATOM 18 C4 U B 58 59.490 161.715 21.287 1.00 45.38 C
ATOM 19 O4 U B 58 59.952 161.098 20.327 1.00 44.26 O
ATOM 20 C5 U B 58 60.208 162.637 22.117 1.00 45.25 C
ATOM 21 C6 U B 58 59.593 163.212 23.158 1.00 45.10 C
ATOM 22 P A B 59 55.385 164.672 28.316 1.00 45.73 P
ATOM 23 OP1 A B 59 54.084 165.315 28.020 1.00 48.14 O
ATOM 24 OP2 A B 59 56.365 165.383 29.187 1.00 46.77 O
ATOM 25 O5' A B 59 55.052 163.239 28.931 1.00 45.79 O
TER
Atoms:
OP1: (59.838,160.187,27.001)
OP2: (62.069,161.248,27.706)
C3': (61.955,164.224,28.669)
C1': (62.611,164.934,30.816)
C5': (60.319,162.662,29.871)
O4': (61.228,164.649,30.886)
C8: (63.833,165.417,32.994)
O2': (64.319,164.711,29.104)
C6: (64.135,162.338,34.653)
C5: (63.929,163.488,33.877)
C4: (63.269,163.324,32.673)
P: (60.697,160.801,28.045)
C4': (60.776,164.082,29.625)
C2': (63.140,164.142,29.621)
C2: (63.046,161.160,32.987)
N1: (63.674,161.164,34.170)
N3: (62.792,162.173,32.166)
N6: (64.759,162.344,35.830)
N7: (64.277,164.817,34.070)
N9: (63.213,164.575,32.103)
O5': (59.906,162.048,28.640)
O3': (61.902,165.513,28.047)
OP2: (62.069,161.248,27.706)
C3': (61.955,164.224,28.669)
C1': (62.611,164.934,30.816)
C5': (60.319,162.662,29.871)
O4': (61.228,164.649,30.886)
C8: (63.833,165.417,32.994)
O2': (64.319,164.711,29.104)
C6: (64.135,162.338,34.653)
C5: (63.929,163.488,33.877)
C4: (63.269,163.324,32.673)
P: (60.697,160.801,28.045)
C4': (60.776,164.082,29.625)
C2': (63.140,164.142,29.621)
C2: (63.046,161.160,32.987)
N1: (63.674,161.164,34.170)
N3: (62.792,162.173,32.166)
N6: (64.759,162.344,35.830)
N7: (64.277,164.817,34.070)
N9: (63.213,164.575,32.103)
O5': (59.906,162.048,28.640)
O3': (61.902,165.513,28.047)
C4: (59.490,161.715,21.287)
N3: (58.178,161.502,21.662)
OP1: (62.778,164.670,25.834)
OP2: (61.961,167.083,26.126)
C2: (57.521,162.068,22.726)
C1': (57.618,163.617,24.613)
C3': (57.540,164.339,26.835)
O5': (60.332,165.221,26.100)
O4': (57.932,164.993,24.587)
C5': (59.259,166.169,26.238)
P: (61.831,165.639,26.445)
C4': (57.930,165.514,25.945)
C2': (58.014,163.150,26.010)
O2': (57.368,161.946,26.350)
N1: (58.278,162.957,23.478)
O4: (59.952,161.098,20.327)
O2: (56.358,161.794,22.986)
C6: (59.593,163.212,23.158)
C5: (60.208,162.637,22.117)
O3': (56.112,164.317,26.926)
N3: (58.178,161.502,21.662)
OP1: (62.778,164.670,25.834)
OP2: (61.961,167.083,26.126)
C2: (57.521,162.068,22.726)
C1': (57.618,163.617,24.613)
C3': (57.540,164.339,26.835)
O5': (60.332,165.221,26.100)
O4': (57.932,164.993,24.587)
C5': (59.259,166.169,26.238)
P: (61.831,165.639,26.445)
C4': (57.930,165.514,25.945)
C2': (58.014,163.150,26.010)
O2': (57.368,161.946,26.350)
N1: (58.278,162.957,23.478)
O4: (59.952,161.098,20.327)
O2: (56.358,161.794,22.986)
C6: (59.593,163.212,23.158)
C5: (60.208,162.637,22.117)
O3': (56.112,164.317,26.926)
Image (generated by PyMOL):