Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A2539:A1580
Extra
PDB:
ATOM 1 O3' G A2538 26.439 -59.685 23.413 1.00 42.12 O
ATOM 2 P G A2539 27.831 -58.982 23.069 1.00 38.08 P
ATOM 3 OP1 G A2539 28.864 -60.022 23.122 1.00 51.54 O
ATOM 4 OP2 G A2539 27.970 -57.801 23.964 1.00 43.28 O
ATOM 5 O5' G A2539 27.594 -58.513 21.569 1.00 27.06 O
ATOM 6 C5' G A2539 27.489 -59.464 20.521 1.00 30.89 C
ATOM 7 C4' G A2539 27.263 -58.790 19.193 1.00 31.42 C
ATOM 8 O4' G A2539 26.139 -57.904 19.312 1.00 37.44 O
ATOM 9 C3' G A2539 28.391 -57.896 18.699 1.00 33.44 C
ATOM 10 O3' G A2539 29.416 -58.623 18.032 1.00 36.05 O
ATOM 11 C2' G A2539 27.677 -56.867 17.816 1.00 34.60 C
ATOM 12 O2' G A2539 27.548 -57.335 16.480 1.00 38.71 O
ATOM 13 C1' G A2539 26.280 -56.814 18.440 1.00 36.79 C
ATOM 14 N9 G A2539 26.026 -55.578 19.190 1.00 29.51 N
ATOM 15 C8 G A2539 25.971 -55.485 20.542 1.00 32.27 C
ATOM 16 N7 G A2539 25.711 -54.266 20.926 1.00 41.94 N
ATOM 17 C5 G A2539 25.555 -53.541 19.753 1.00 35.67 C
ATOM 18 C6 G A2539 25.262 -52.173 19.568 1.00 38.25 C
ATOM 19 O6 G A2539 25.082 -51.315 20.438 1.00 43.77 O
ATOM 20 N1 G A2539 25.194 -51.857 18.219 1.00 32.92 N
ATOM 21 C2 G A2539 25.399 -52.744 17.180 1.00 38.05 C
ATOM 22 N2 G A2539 25.315 -52.256 15.924 1.00 36.19 N
ATOM 23 N3 G A2539 25.675 -54.030 17.353 1.00 39.16 N
ATOM 24 C4 G A2539 25.735 -54.349 18.662 1.00 33.05 C
ATOM 25 P C A2540 30.968 -58.226 18.221 1.00 29.89 P
ATOM 26 OP1 C A2540 31.764 -59.176 17.422 1.00 54.42 O
ATOM 27 OP2 C A2540 31.231 -58.126 19.674 1.00 34.40 O
ATOM 28 O5' C A2540 31.035 -56.809 17.546 1.00 29.03 O
TER
ATOM 1 O3' C B1579 26.678 -51.456 13.633 1.00 32.11 O
ATOM 2 P U B1580 26.153 -52.388 12.443 1.00 35.95 P
ATOM 3 OP1 U B1580 25.709 -53.666 13.058 1.00 34.64 O
ATOM 4 OP2 U B1580 27.206 -52.428 11.414 1.00 48.38 O
ATOM 5 O5' U B1580 24.893 -51.565 11.883 1.00 49.55 O
ATOM 6 C5' U B1580 23.579 -51.793 12.396 1.00 42.60 C
ATOM 7 C4' U B1580 22.545 -50.881 11.768 1.00 35.10 C
ATOM 8 O4' U B1580 23.078 -49.542 11.600 1.00 41.45 O
ATOM 9 C3' U B1580 22.051 -51.271 10.388 1.00 30.70 C
ATOM 10 O3' U B1580 21.047 -52.260 10.446 1.00 38.67 O
ATOM 11 C2' U B1580 21.550 -49.953 9.832 1.00 33.39 C
ATOM 12 O2' U B1580 20.264 -49.668 10.330 1.00 37.36 O
ATOM 13 C1' U B1580 22.524 -48.952 10.446 1.00 39.27 C
ATOM 14 N1 U B1580 23.612 -48.603 9.517 1.00 39.15 N
ATOM 15 C2 U B1580 23.439 -47.499 8.715 1.00 33.71 C
ATOM 16 O2 U B1580 22.460 -46.811 8.732 1.00 35.14 O
ATOM 17 N3 U B1580 24.460 -47.197 7.875 1.00 38.28 N
ATOM 18 C4 U B1580 25.622 -47.900 7.758 1.00 38.36 C
ATOM 19 O4 U B1580 26.450 -47.529 6.943 1.00 44.35 O
ATOM 20 C5 U B1580 25.737 -49.038 8.615 1.00 42.20 C
ATOM 21 C6 U B1580 24.754 -49.354 9.457 1.00 38.49 C
ATOM 22 P C B1581 20.716 -53.182 9.173 1.00 46.08 P
ATOM 23 OP1 C B1581 20.377 -54.527 9.685 1.00 50.33 O
ATOM 24 OP2 C B1581 21.843 -53.048 8.215 1.00 45.61 O
ATOM 25 O5' C B1581 19.427 -52.485 8.577 1.00 39.16 O
TER
ATOM 2 P G A2539 27.831 -58.982 23.069 1.00 38.08 P
ATOM 3 OP1 G A2539 28.864 -60.022 23.122 1.00 51.54 O
ATOM 4 OP2 G A2539 27.970 -57.801 23.964 1.00 43.28 O
ATOM 5 O5' G A2539 27.594 -58.513 21.569 1.00 27.06 O
ATOM 6 C5' G A2539 27.489 -59.464 20.521 1.00 30.89 C
ATOM 7 C4' G A2539 27.263 -58.790 19.193 1.00 31.42 C
ATOM 8 O4' G A2539 26.139 -57.904 19.312 1.00 37.44 O
ATOM 9 C3' G A2539 28.391 -57.896 18.699 1.00 33.44 C
ATOM 10 O3' G A2539 29.416 -58.623 18.032 1.00 36.05 O
ATOM 11 C2' G A2539 27.677 -56.867 17.816 1.00 34.60 C
ATOM 12 O2' G A2539 27.548 -57.335 16.480 1.00 38.71 O
ATOM 13 C1' G A2539 26.280 -56.814 18.440 1.00 36.79 C
ATOM 14 N9 G A2539 26.026 -55.578 19.190 1.00 29.51 N
ATOM 15 C8 G A2539 25.971 -55.485 20.542 1.00 32.27 C
ATOM 16 N7 G A2539 25.711 -54.266 20.926 1.00 41.94 N
ATOM 17 C5 G A2539 25.555 -53.541 19.753 1.00 35.67 C
ATOM 18 C6 G A2539 25.262 -52.173 19.568 1.00 38.25 C
ATOM 19 O6 G A2539 25.082 -51.315 20.438 1.00 43.77 O
ATOM 20 N1 G A2539 25.194 -51.857 18.219 1.00 32.92 N
ATOM 21 C2 G A2539 25.399 -52.744 17.180 1.00 38.05 C
ATOM 22 N2 G A2539 25.315 -52.256 15.924 1.00 36.19 N
ATOM 23 N3 G A2539 25.675 -54.030 17.353 1.00 39.16 N
ATOM 24 C4 G A2539 25.735 -54.349 18.662 1.00 33.05 C
ATOM 25 P C A2540 30.968 -58.226 18.221 1.00 29.89 P
ATOM 26 OP1 C A2540 31.764 -59.176 17.422 1.00 54.42 O
ATOM 27 OP2 C A2540 31.231 -58.126 19.674 1.00 34.40 O
ATOM 28 O5' C A2540 31.035 -56.809 17.546 1.00 29.03 O
TER
ATOM 1 O3' C B1579 26.678 -51.456 13.633 1.00 32.11 O
ATOM 2 P U B1580 26.153 -52.388 12.443 1.00 35.95 P
ATOM 3 OP1 U B1580 25.709 -53.666 13.058 1.00 34.64 O
ATOM 4 OP2 U B1580 27.206 -52.428 11.414 1.00 48.38 O
ATOM 5 O5' U B1580 24.893 -51.565 11.883 1.00 49.55 O
ATOM 6 C5' U B1580 23.579 -51.793 12.396 1.00 42.60 C
ATOM 7 C4' U B1580 22.545 -50.881 11.768 1.00 35.10 C
ATOM 8 O4' U B1580 23.078 -49.542 11.600 1.00 41.45 O
ATOM 9 C3' U B1580 22.051 -51.271 10.388 1.00 30.70 C
ATOM 10 O3' U B1580 21.047 -52.260 10.446 1.00 38.67 O
ATOM 11 C2' U B1580 21.550 -49.953 9.832 1.00 33.39 C
ATOM 12 O2' U B1580 20.264 -49.668 10.330 1.00 37.36 O
ATOM 13 C1' U B1580 22.524 -48.952 10.446 1.00 39.27 C
ATOM 14 N1 U B1580 23.612 -48.603 9.517 1.00 39.15 N
ATOM 15 C2 U B1580 23.439 -47.499 8.715 1.00 33.71 C
ATOM 16 O2 U B1580 22.460 -46.811 8.732 1.00 35.14 O
ATOM 17 N3 U B1580 24.460 -47.197 7.875 1.00 38.28 N
ATOM 18 C4 U B1580 25.622 -47.900 7.758 1.00 38.36 C
ATOM 19 O4 U B1580 26.450 -47.529 6.943 1.00 44.35 O
ATOM 20 C5 U B1580 25.737 -49.038 8.615 1.00 42.20 C
ATOM 21 C6 U B1580 24.754 -49.354 9.457 1.00 38.49 C
ATOM 22 P C B1581 20.716 -53.182 9.173 1.00 46.08 P
ATOM 23 OP1 C B1581 20.377 -54.527 9.685 1.00 50.33 O
ATOM 24 OP2 C B1581 21.843 -53.048 8.215 1.00 45.61 O
ATOM 25 O5' C B1581 19.427 -52.485 8.577 1.00 39.16 O
TER
Atoms:
OP1: (28.864,-60.022,23.122)
OP2: (27.970,-57.801,23.964)
C3': (28.391,-57.896,18.699)
C1': (26.280,-56.814,18.440)
C5': (27.489,-59.464,20.521)
O6: (25.082,-51.315,20.438)
O4': (26.139,-57.904,19.312)
C8: (25.971,-55.485,20.542)
C2: (25.399,-52.744,17.180)
C6: (25.262,-52.173,19.568)
C5: (25.555,-53.541,19.753)
C4: (25.735,-54.349,18.662)
P: (27.831,-58.982,23.069)
C4': (27.263,-58.790,19.193)
C2': (27.677,-56.867,17.816)
O2': (27.548,-57.335,16.480)
N1: (25.194,-51.857,18.219)
N2: (25.315,-52.256,15.924)
N3: (25.675,-54.030,17.353)
N7: (25.711,-54.266,20.926)
N9: (26.026,-55.578,19.190)
O5': (27.594,-58.513,21.569)
O3': (29.416,-58.623,18.032)
OP2: (27.970,-57.801,23.964)
C3': (28.391,-57.896,18.699)
C1': (26.280,-56.814,18.440)
C5': (27.489,-59.464,20.521)
O6: (25.082,-51.315,20.438)
O4': (26.139,-57.904,19.312)
C8: (25.971,-55.485,20.542)
C2: (25.399,-52.744,17.180)
C6: (25.262,-52.173,19.568)
C5: (25.555,-53.541,19.753)
C4: (25.735,-54.349,18.662)
P: (27.831,-58.982,23.069)
C4': (27.263,-58.790,19.193)
C2': (27.677,-56.867,17.816)
O2': (27.548,-57.335,16.480)
N1: (25.194,-51.857,18.219)
N2: (25.315,-52.256,15.924)
N3: (25.675,-54.030,17.353)
N7: (25.711,-54.266,20.926)
N9: (26.026,-55.578,19.190)
O5': (27.594,-58.513,21.569)
O3': (29.416,-58.623,18.032)
C4: (25.622,-47.900,7.758)
N3: (24.460,-47.197,7.875)
OP1: (25.709,-53.666,13.058)
OP2: (27.206,-52.428,11.414)
C2: (23.439,-47.499,8.715)
C1': (22.524,-48.952,10.446)
C3': (22.051,-51.271,10.388)
O5': (24.893,-51.565,11.883)
O4': (23.078,-49.542,11.600)
C5': (23.579,-51.793,12.396)
P: (26.153,-52.388,12.443)
C4': (22.545,-50.881,11.768)
C2': (21.550,-49.953,9.832)
O2': (20.264,-49.668,10.330)
N1: (23.612,-48.603,9.517)
O4: (26.450,-47.529,6.943)
O2: (22.460,-46.811,8.732)
C6: (24.754,-49.354,9.457)
C5: (25.737,-49.038,8.615)
O3': (21.047,-52.260,10.446)
N3: (24.460,-47.197,7.875)
OP1: (25.709,-53.666,13.058)
OP2: (27.206,-52.428,11.414)
C2: (23.439,-47.499,8.715)
C1': (22.524,-48.952,10.446)
C3': (22.051,-51.271,10.388)
O5': (24.893,-51.565,11.883)
O4': (23.078,-49.542,11.600)
C5': (23.579,-51.793,12.396)
P: (26.153,-52.388,12.443)
C4': (22.545,-50.881,11.768)
C2': (21.550,-49.953,9.832)
O2': (20.264,-49.668,10.330)
N1: (23.612,-48.603,9.517)
O4: (26.450,-47.529,6.943)
O2: (22.460,-46.811,8.732)
C6: (24.754,-49.354,9.457)
C5: (25.737,-49.038,8.615)
O3': (21.047,-52.260,10.446)
Image (generated by PyMOL):