ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IQN:A32:A33

Extra

PDB:
ATOM 1 O3' G A 31 55.201 60.874 3.496 1.00 49.21 O
ATOM 2 P A A 32 55.115 60.761 1.901 1.00 49.21 P
ATOM 3 OP1 A A 32 53.721 60.389 1.538 1.00 48.12 O
ATOM 4 OP2 A A 32 56.241 59.894 1.473 1.00 48.00 O
ATOM 5 O5' A A 32 55.400 62.245 1.388 1.00 50.66 O
ATOM 6 C5' A A 32 56.730 62.780 1.351 1.00 51.14 C
ATOM 7 C4' A A 32 56.818 63.882 0.314 1.00 51.02 C
ATOM 8 O4' A A 32 57.961 64.722 0.654 1.00 49.69 O
ATOM 9 C3' A A 32 57.107 63.375 -1.095 1.00 52.07 C
ATOM 10 O3' A A 32 56.386 63.928 -2.205 1.00 53.95 O
ATOM 11 C2' A A 32 58.632 63.368 -1.188 1.00 50.12 C
ATOM 12 O2' A A 32 59.136 63.647 -2.485 1.00 51.50 O
ATOM 13 C1' A A 32 59.016 64.526 -0.272 1.00 47.50 C
ATOM 14 N9 A A 32 60.257 64.235 0.455 1.00 44.37 N
ATOM 15 C8 A A 32 61.351 65.051 0.651 1.00 43.10 C
ATOM 16 N7 A A 32 62.346 64.464 1.276 1.00 40.12 N
ATOM 17 C5 A A 32 61.871 63.181 1.522 1.00 39.49 C
ATOM 18 C6 A A 32 62.448 62.052 2.142 1.00 37.62 C
ATOM 19 N6 A A 32 63.683 62.020 2.641 1.00 36.54 N
ATOM 20 N1 A A 32 61.700 60.937 2.230 1.00 36.83 N
ATOM 21 C2 A A 32 60.469 60.951 1.721 1.00 38.83 C
ATOM 22 N3 A A 32 59.818 61.936 1.109 1.00 39.92 N
ATOM 23 C4 A A 32 60.581 63.036 1.041 1.00 41.37 C
ATOM 24 P U A 33 55.634 65.337 -2.078 1.00 55.05 P
ATOM 25 OP1 U A 33 55.037 65.583 -3.407 1.00 56.00 O
ATOM 26 OP2 U A 33 56.582 66.324 -1.505 1.00 54.52 O
ATOM 27 O5' U A 33 54.430 65.081 -1.063 1.00 56.78 O
TER

ATOM 1 O3' A B 32 56.386 63.928 -2.205 1.00 53.95 O
ATOM 2 P U B 33 55.634 65.337 -2.078 1.00 55.05 P
ATOM 3 OP1 U B 33 55.037 65.583 -3.407 1.00 56.00 O
ATOM 4 OP2 U B 33 56.582 66.324 -1.505 1.00 54.52 O
ATOM 5 O5' U B 33 54.430 65.081 -1.063 1.00 56.78 O
ATOM 6 C5' U B 33 53.537 66.141 -0.711 1.00 56.59 C
ATOM 7 C4' U B 33 52.367 65.603 0.069 1.00 57.42 C
ATOM 8 O4' U B 33 51.334 65.194 -0.859 1.00 58.10 O
ATOM 9 C3' U B 33 52.672 64.348 0.873 1.00 58.49 C
ATOM 10 O3' U B 33 53.260 64.669 2.149 1.00 60.24 O
ATOM 11 C2' U B 33 51.307 63.678 0.987 1.00 58.59 C
ATOM 12 O2' U B 33 50.517 64.114 2.074 1.00 59.41 O
ATOM 13 C1' U B 33 50.653 64.061 -0.346 1.00 59.68 C
ATOM 14 N1 U B 33 50.620 63.006 -1.375 1.00 61.30 N
ATOM 15 C2 U B 33 49.573 62.101 -1.326 1.00 61.03 C
ATOM 16 O2 U B 33 48.689 62.163 -0.495 1.00 63.03 O
ATOM 17 N3 U B 33 49.599 61.124 -2.288 1.00 61.06 N
ATOM 18 C4 U B 33 50.539 60.958 -3.280 1.00 61.23 C
ATOM 19 O4 U B 33 50.461 59.982 -4.031 1.00 60.40 O
ATOM 20 C5 U B 33 51.580 61.943 -3.282 1.00 61.50 C
ATOM 21 C6 U B 33 51.587 62.909 -2.352 1.00 61.82 C
ATOM 22 P G B 34 52.571 65.761 3.129 1.00 59.96 P
ATOM 23 OP1 G B 34 51.600 65.085 4.029 1.00 58.41 O
ATOM 24 OP2 G B 34 52.144 66.935 2.332 1.00 60.73 O
ATOM 25 O5' G B 34 53.759 66.273 4.046 1.00 58.31 O
TER

Atoms:
OP1: (53.721,60.389,1.538)
OP2: (56.241,59.894,1.473)
C3': (57.107,63.375,-1.095)
C1': (59.016,64.526,-0.272)
C5': (56.730,62.780,1.351)
O4': (57.961,64.722,0.654)
C8: (61.351,65.051,0.651)
O2': (59.136,63.647,-2.485)
C6: (62.448,62.052,2.142)
C5: (61.871,63.181,1.522)
C4: (60.581,63.036,1.041)
P: (55.115,60.761,1.901)
C4': (56.818,63.882,0.314)
C2': (58.632,63.368,-1.188)
C2: (60.469,60.951,1.721)
N1: (61.700,60.937,2.230)
N3: (59.818,61.936,1.109)
N6: (63.683,62.020,2.641)
N7: (62.346,64.464,1.276)
N9: (60.257,64.235,0.455)
O5': (55.400,62.245,1.388)
O3': (56.386,63.928,-2.205)
C4: (50.539,60.958,-3.280)
N3: (49.599,61.124,-2.288)
OP1: (55.037,65.583,-3.407)
OP2: (56.582,66.324,-1.505)
C2: (49.573,62.101,-1.326)
C1': (50.653,64.061,-0.346)
C3': (52.672,64.348,0.873)
O5': (54.430,65.081,-1.063)
O4': (51.334,65.194,-0.859)
C5': (53.537,66.141,-0.711)
P: (55.634,65.337,-2.078)
C4': (52.367,65.603,0.069)
C2': (51.307,63.678,0.987)
O2': (50.517,64.114,2.074)
N1: (50.620,63.006,-1.375)
O4: (50.461,59.982,-4.031)
O2: (48.689,62.163,-0.495)
C6: (51.587,62.909,-2.352)
C5: (51.580,61.943,-3.282)
O3': (53.260,64.669,2.149)
Image (generated by PyMOL):
PyMOL image
show in jmol