ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A2116:A2117

Extra

PDB:
ATOM 1 O3' C A2115 102.855 104.227 67.636 1.00 58.66 O
ATOM 2 P G A2116 101.381 104.337 68.296 1.00 59.40 P
ATOM 3 OP1 G A2116 101.597 104.718 69.712 1.00 57.90 O
ATOM 4 OP2 G A2116 100.551 103.144 67.981 1.00 55.67 O
ATOM 5 O5' G A2116 100.731 105.582 67.533 1.00 58.12 O
ATOM 6 C5' G A2116 101.333 106.898 67.625 1.00 59.36 C
ATOM 7 C4' G A2116 100.602 107.887 66.747 1.00 59.54 C
ATOM 8 O4' G A2116 100.857 107.608 65.351 1.00 59.38 O
ATOM 9 C3' G A2116 99.093 107.825 66.872 1.00 59.93 C
ATOM 10 O3' G A2116 98.626 108.604 67.947 1.00 61.33 O
ATOM 11 C2' G A2116 98.614 108.383 65.550 1.00 59.63 C
ATOM 12 O2' G A2116 98.568 109.800 65.512 1.00 61.46 O
ATOM 13 C1' G A2116 99.665 107.805 64.606 1.00 58.57 C
ATOM 14 N9 G A2116 99.191 106.502 64.172 1.00 56.01 N
ATOM 15 C8 G A2116 99.469 105.279 64.731 1.00 55.12 C
ATOM 16 N7 G A2116 98.875 104.294 64.119 1.00 53.65 N
ATOM 17 C5 G A2116 98.168 104.905 63.101 1.00 53.22 C
ATOM 18 C6 G A2116 97.351 104.345 62.111 1.00 52.29 C
ATOM 19 O6 G A2116 97.083 103.158 61.929 1.00 50.77 O
ATOM 20 N1 G A2116 96.825 105.319 61.269 1.00 52.76 N
ATOM 21 C2 G A2116 97.073 106.666 61.371 1.00 53.38 C
ATOM 22 N2 G A2116 96.494 107.440 60.456 1.00 53.46 N
ATOM 23 N3 G A2116 97.839 107.204 62.300 1.00 52.99 N
ATOM 24 C4 G A2116 98.353 106.268 63.123 1.00 54.33 C
ATOM 25 P G A2117 97.852 107.892 69.154 1.00 63.83 P
ATOM 26 OP1 G A2117 98.807 108.004 70.317 1.00 62.93 O
ATOM 27 OP2 G A2117 97.426 106.542 68.676 1.00 63.20 O
ATOM 28 O5' G A2117 96.558 108.807 69.375 1.00 59.02 O
TER

ATOM 1 O3' G B2116 98.626 108.604 67.947 1.00 61.33 O
ATOM 2 P G B2117 97.852 107.892 69.154 1.00 63.83 P
ATOM 3 OP1 G B2117 98.807 108.004 70.317 1.00 62.93 O
ATOM 4 OP2 G B2117 97.426 106.542 68.676 1.00 63.20 O
ATOM 5 O5' G B2117 96.558 108.807 69.375 1.00 59.02 O
ATOM 6 C5' G B2117 96.461 109.644 70.540 1.00 52.59 C
ATOM 7 C4' G B2117 95.767 110.950 70.218 1.00 46.31 C
ATOM 8 O4' G B2117 94.450 110.643 69.708 1.00 44.48 O
ATOM 9 C3' G B2117 95.550 111.841 71.443 1.00 44.03 C
ATOM 10 O3' G B2117 95.463 113.220 71.092 1.00 41.00 O
ATOM 11 C2' G B2117 94.213 111.326 71.956 1.00 42.52 C
ATOM 12 O2' G B2117 93.472 112.233 72.715 1.00 42.15 O
ATOM 13 C1' G B2117 93.480 111.026 70.658 1.00 42.90 C
ATOM 14 N9 G B2117 92.536 109.928 70.809 1.00 43.18 N
ATOM 15 C8 G B2117 91.287 109.858 70.252 1.00 44.32 C
ATOM 16 N7 G B2117 90.642 108.774 70.572 1.00 43.93 N
ATOM 17 C5 G B2117 91.514 108.085 71.393 1.00 43.15 C
ATOM 18 C6 G B2117 91.348 106.862 72.049 1.00 43.49 C
ATOM 19 O6 G B2117 90.354 106.138 72.064 1.00 44.63 O
ATOM 20 N1 G B2117 92.489 106.495 72.756 1.00 43.71 N
ATOM 21 C2 G B2117 93.643 107.224 72.825 1.00 42.95 C
ATOM 22 N2 G B2117 94.646 106.660 73.538 1.00 41.41 N
ATOM 23 N3 G B2117 93.802 108.406 72.232 1.00 43.28 N
ATOM 24 C4 G B2117 92.700 108.770 71.536 1.00 42.68 C
ATOM 25 P G B2118 96.785 114.133 71.009 1.00 36.60 P
ATOM 26 OP1 G B2118 97.886 113.233 70.669 1.00 37.20 O
ATOM 27 OP2 G B2118 96.879 114.996 72.211 1.00 35.49 O
ATOM 28 O5' G B2118 96.481 115.021 69.726 1.00 35.88 O
TER

Atoms:
OP1: (101.597,104.718,69.712)
OP2: (100.551,103.144,67.981)
C3': (99.093,107.825,66.872)
C1': (99.665,107.805,64.606)
C5': (101.333,106.898,67.625)
O6: (97.083,103.158,61.929)
O4': (100.857,107.608,65.351)
C8: (99.469,105.279,64.731)
C2: (97.073,106.666,61.371)
C6: (97.351,104.345,62.111)
C5: (98.168,104.905,63.101)
C4: (98.353,106.268,63.123)
P: (101.381,104.337,68.296)
C4': (100.602,107.887,66.747)
C2': (98.614,108.383,65.550)
O2': (98.568,109.800,65.512)
N1: (96.825,105.319,61.269)
N2: (96.494,107.440,60.456)
N3: (97.839,107.204,62.300)
N7: (98.875,104.294,64.119)
N9: (99.191,106.502,64.172)
O5': (100.731,105.582,67.533)
O3': (98.626,108.604,67.947)
OP1: (98.807,108.004,70.317)
OP2: (97.426,106.542,68.676)
C3': (95.550,111.841,71.443)
C1': (93.480,111.026,70.658)
C5': (96.461,109.644,70.540)
O6: (90.354,106.138,72.064)
O4': (94.450,110.643,69.708)
C8: (91.287,109.858,70.252)
C2: (93.643,107.224,72.825)
C6: (91.348,106.862,72.049)
C5: (91.514,108.085,71.393)
C4: (92.700,108.770,71.536)
P: (97.852,107.892,69.154)
C4': (95.767,110.950,70.218)
C2': (94.213,111.326,71.956)
O2': (93.472,112.233,72.715)
N1: (92.489,106.495,72.756)
N2: (94.646,106.660,73.538)
N3: (93.802,108.406,72.232)
N7: (90.642,108.774,70.572)
N9: (92.536,109.928,70.809)
O5': (96.558,108.807,69.375)
O3': (95.463,113.220,71.092)
Image (generated by PyMOL):
PyMOL image
show in jmol