ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3RW6:H44:H45

Extra

PDB:
ATOM 1 O3' A A 43 8.716 -1.261 2.269 1.00 35.13 O
ATOM 2 P A A 44 9.279 -0.060 3.175 1.00 30.22 P
ATOM 3 OP1 A A 44 9.849 0.932 2.255 1.00 34.16 O
ATOM 4 OP2 A A 44 10.143 -0.567 4.248 1.00 25.51 O
ATOM 5 O5' A A 44 7.946 0.588 3.771 1.00 31.90 O
ATOM 6 C5' A A 44 6.958 -0.105 4.505 1.00 29.91 C
ATOM 7 C4' A A 44 5.862 0.905 4.798 1.00 30.06 C
ATOM 8 O4' A A 44 4.626 0.263 5.212 1.00 32.29 O
ATOM 9 C3' A A 44 6.177 1.913 5.889 1.00 27.89 C
ATOM 10 O3' A A 44 5.404 3.061 5.586 1.00 31.14 O
ATOM 11 C2' A A 44 5.628 1.194 7.120 1.00 30.60 C
ATOM 12 O2' A A 44 5.325 2.076 8.179 1.00 30.95 O
ATOM 13 C1' A A 44 4.334 0.629 6.555 1.00 30.80 C
ATOM 14 N9 A A 44 3.826 -0.581 7.183 1.00 27.25 N
ATOM 15 C8 A A 44 2.550 -0.787 7.621 1.00 28.51 C
ATOM 16 N7 A A 44 2.381 -1.989 8.130 1.00 36.28 N
ATOM 17 C5 A A 44 3.614 -2.626 7.990 1.00 31.96 C
ATOM 18 C6 A A 44 4.083 -3.935 8.318 1.00 30.07 C
ATOM 19 N6 A A 44 3.339 -4.892 8.887 1.00 25.94 N
ATOM 20 N1 A A 44 5.374 -4.221 8.047 1.00 28.82 N
ATOM 21 C2 A A 44 6.131 -3.268 7.478 1.00 31.10 C
ATOM 22 N3 A A 44 5.804 -2.020 7.116 1.00 29.76 N
ATOM 23 C4 A A 44 4.517 -1.754 7.403 1.00 29.07 C
ATOM 24 P U A 45 5.922 4.560 5.824 1.00 31.87 P
ATOM 25 OP1 U A 45 7.015 4.550 6.822 1.00 27.40 O
ATOM 26 OP2 U A 45 4.680 5.355 5.989 1.00 28.16 O
ATOM 27 O5' U A 45 6.572 4.945 4.412 1.00 33.21 O
TER

ATOM 1 O3' A B 44 5.404 3.061 5.586 1.00 31.14 O
ATOM 2 P U B 45 5.922 4.560 5.824 1.00 31.87 P
ATOM 3 OP1 U B 45 7.015 4.550 6.822 1.00 27.40 O
ATOM 4 OP2 U B 45 4.680 5.355 5.989 1.00 28.16 O
ATOM 5 O5' U B 45 6.572 4.945 4.412 1.00 33.21 O
ATOM 6 C5' U B 45 5.739 5.009 3.254 1.00 30.23 C
ATOM 7 C4' U B 45 6.620 5.143 2.037 1.00 33.51 C
ATOM 8 O4' U B 45 7.600 6.170 2.333 1.00 38.60 O
ATOM 9 C3' U B 45 7.409 3.875 1.724 1.00 34.67 C
ATOM 10 O3' U B 45 7.514 3.657 0.321 1.00 32.09 O
ATOM 11 C2' U B 45 8.753 4.191 2.365 1.00 36.29 C
ATOM 12 O2' U B 45 9.844 3.450 1.850 1.00 35.09 O
ATOM 13 C1' U B 45 8.875 5.669 2.029 1.00 33.26 C
ATOM 14 N1 U B 45 9.888 6.282 2.910 1.00 34.28 N
ATOM 15 C2 U B 45 11.070 6.698 2.339 1.00 42.43 C
ATOM 16 O2 U B 45 11.280 6.611 1.137 1.00 44.62 O
ATOM 17 N3 U B 45 11.976 7.238 3.223 1.00 43.16 N
ATOM 18 C4 U B 45 11.817 7.365 4.596 1.00 43.40 C
ATOM 19 O4 U B 45 12.721 7.850 5.265 1.00 44.79 O
ATOM 20 C5 U B 45 10.558 6.895 5.123 1.00 37.85 C
ATOM 21 C6 U B 45 9.662 6.378 4.268 1.00 37.44 C
ATOM 22 P G B 46 6.264 3.105 -0.504 1.00 35.40 P
ATOM 23 OP1 G B 46 6.802 2.671 -1.803 1.00 29.85 O
ATOM 24 OP2 G B 46 5.131 4.048 -0.420 1.00 33.93 O
ATOM 25 O5' G B 46 5.771 1.845 0.346 1.00 34.55 O
TER

Atoms:
OP1: (9.849,0.932,2.255)
OP2: (10.143,-0.567,4.248)
C3': (6.177,1.913,5.889)
C1': (4.334,0.629,6.555)
C5': (6.958,-0.105,4.505)
O4': (4.626,0.263,5.212)
C8: (2.550,-0.787,7.621)
O2': (5.325,2.076,8.179)
C6: (4.083,-3.935,8.318)
C5: (3.614,-2.626,7.990)
C4: (4.517,-1.754,7.403)
P: (9.279,-0.060,3.175)
C4': (5.862,0.905,4.798)
C2': (5.628,1.194,7.120)
C2: (6.131,-3.268,7.478)
N1: (5.374,-4.221,8.047)
N3: (5.804,-2.020,7.116)
N6: (3.339,-4.892,8.887)
N7: (2.381,-1.989,8.130)
N9: (3.826,-0.581,7.183)
O5': (7.946,0.588,3.771)
O3': (5.404,3.061,5.586)
C4: (11.817,7.365,4.596)
N3: (11.976,7.238,3.223)
OP1: (7.015,4.550,6.822)
OP2: (4.680,5.355,5.989)
C2: (11.070,6.698,2.339)
C1': (8.875,5.669,2.029)
C3': (7.409,3.875,1.724)
O5': (6.572,4.945,4.412)
O4': (7.600,6.170,2.333)
C5': (5.739,5.009,3.254)
P: (5.922,4.560,5.824)
C4': (6.620,5.143,2.037)
C2': (8.753,4.191,2.365)
O2': (9.844,3.450,1.850)
N1: (9.888,6.282,2.910)
O4: (12.721,7.850,5.265)
O2: (11.280,6.611,1.137)
C6: (9.662,6.378,4.268)
C5: (10.558,6.895,5.123)
O3': (7.514,3.657,0.321)
Image (generated by PyMOL):
PyMOL image
show in jmol