Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02116:02117
Extra
PDB:
ATOM 1 O3' C A2115 103.052 104.498 67.220 1.00 48.74 O
ATOM 2 P G A2116 101.622 104.677 67.928 1.00 50.50 P
ATOM 3 OP1 G A2116 101.896 105.150 69.308 1.00 53.23 O
ATOM 4 OP2 G A2116 100.805 103.448 67.723 1.00 45.55 O
ATOM 5 O5' G A2116 100.951 105.885 67.134 1.00 50.06 O
ATOM 6 C5' G A2116 101.502 107.220 67.198 1.00 48.44 C
ATOM 7 C4' G A2116 100.695 108.161 66.332 1.00 48.80 C
ATOM 8 O4' G A2116 100.840 107.798 64.934 1.00 48.76 O
ATOM 9 C3' G A2116 99.196 108.101 66.571 1.00 49.69 C
ATOM 10 O3' G A2116 98.811 108.874 67.691 1.00 50.12 O
ATOM 11 C2' G A2116 98.638 108.625 65.260 1.00 49.76 C
ATOM 12 O2' G A2116 98.736 110.032 65.148 1.00 50.12 O
ATOM 13 C1' G A2116 99.597 107.972 64.265 1.00 49.37 C
ATOM 14 N9 G A2116 99.129 106.661 63.825 1.00 47.70 N
ATOM 15 C8 G A2116 99.450 105.443 64.371 1.00 47.09 C
ATOM 16 N7 G A2116 98.895 104.441 63.747 1.00 47.32 N
ATOM 17 C5 G A2116 98.160 105.032 62.732 1.00 46.82 C
ATOM 18 C6 G A2116 97.356 104.448 61.726 1.00 47.72 C
ATOM 19 O6 G A2116 97.133 103.249 61.516 1.00 50.33 O
ATOM 20 N1 G A2116 96.785 105.412 60.904 1.00 47.00 N
ATOM 21 C2 G A2116 96.971 106.763 61.027 1.00 46.51 C
ATOM 22 N2 G A2116 96.336 107.527 60.128 1.00 45.82 N
ATOM 23 N3 G A2116 97.723 107.324 61.960 1.00 46.98 N
ATOM 24 C4 G A2116 98.284 106.404 62.772 1.00 47.28 C
ATOM 25 P G A2117 98.108 108.153 68.940 1.00 53.56 P
ATOM 26 OP1 G A2117 98.985 108.410 70.124 1.00 47.91 O
ATOM 27 OP2 G A2117 97.767 106.750 68.561 1.00 52.21 O
ATOM 28 O5' G A2117 96.731 108.940 69.098 1.00 48.66 O
TER
ATOM 1 O3' G B2116 98.811 108.874 67.691 1.00 50.12 O
ATOM 2 P G B2117 98.108 108.153 68.940 1.00 53.56 P
ATOM 3 OP1 G B2117 98.985 108.410 70.124 1.00 47.91 O
ATOM 4 OP2 G B2117 97.767 106.750 68.561 1.00 52.21 O
ATOM 5 O5' G B2117 96.731 108.940 69.098 1.00 48.66 O
ATOM 6 C5' G B2117 96.479 109.716 70.269 1.00 43.45 C
ATOM 7 C4' G B2117 95.704 110.955 69.921 1.00 36.70 C
ATOM 8 O4' G B2117 94.411 110.574 69.388 1.00 33.67 O
ATOM 9 C3' G B2117 95.424 111.837 71.128 1.00 35.35 C
ATOM 10 O3' G B2117 95.350 113.190 70.710 1.00 34.27 O
ATOM 11 C2' G B2117 94.066 111.334 71.595 1.00 33.65 C
ATOM 12 O2' G B2117 93.334 112.300 72.317 1.00 33.49 O
ATOM 13 C1' G B2117 93.390 111.010 70.265 1.00 33.83 C
ATOM 14 N9 G B2117 92.392 109.948 70.369 1.00 33.75 N
ATOM 15 C8 G B2117 91.136 109.953 69.811 1.00 34.11 C
ATOM 16 N7 G B2117 90.459 108.867 70.063 1.00 34.17 N
ATOM 17 C5 G B2117 91.319 108.094 70.832 1.00 34.03 C
ATOM 18 C6 G B2117 91.134 106.808 71.403 1.00 35.01 C
ATOM 19 O6 G B2117 90.146 106.067 71.322 1.00 35.78 O
ATOM 20 N1 G B2117 92.252 106.401 72.127 1.00 33.03 N
ATOM 21 C2 G B2117 93.402 107.132 72.276 1.00 32.58 C
ATOM 22 N2 G B2117 94.359 106.572 73.023 1.00 30.11 N
ATOM 23 N3 G B2117 93.595 108.328 71.735 1.00 32.38 N
ATOM 24 C4 G B2117 92.517 108.746 71.035 1.00 32.90 C
ATOM 25 P G B2118 96.696 114.039 70.525 1.00 30.79 P
ATOM 26 OP1 G B2118 97.792 113.092 70.233 1.00 32.73 O
ATOM 27 OP2 G B2118 96.807 114.942 71.683 1.00 28.47 O
ATOM 28 O5' G B2118 96.400 114.868 69.197 1.00 29.03 O
TER
ATOM 2 P G A2116 101.622 104.677 67.928 1.00 50.50 P
ATOM 3 OP1 G A2116 101.896 105.150 69.308 1.00 53.23 O
ATOM 4 OP2 G A2116 100.805 103.448 67.723 1.00 45.55 O
ATOM 5 O5' G A2116 100.951 105.885 67.134 1.00 50.06 O
ATOM 6 C5' G A2116 101.502 107.220 67.198 1.00 48.44 C
ATOM 7 C4' G A2116 100.695 108.161 66.332 1.00 48.80 C
ATOM 8 O4' G A2116 100.840 107.798 64.934 1.00 48.76 O
ATOM 9 C3' G A2116 99.196 108.101 66.571 1.00 49.69 C
ATOM 10 O3' G A2116 98.811 108.874 67.691 1.00 50.12 O
ATOM 11 C2' G A2116 98.638 108.625 65.260 1.00 49.76 C
ATOM 12 O2' G A2116 98.736 110.032 65.148 1.00 50.12 O
ATOM 13 C1' G A2116 99.597 107.972 64.265 1.00 49.37 C
ATOM 14 N9 G A2116 99.129 106.661 63.825 1.00 47.70 N
ATOM 15 C8 G A2116 99.450 105.443 64.371 1.00 47.09 C
ATOM 16 N7 G A2116 98.895 104.441 63.747 1.00 47.32 N
ATOM 17 C5 G A2116 98.160 105.032 62.732 1.00 46.82 C
ATOM 18 C6 G A2116 97.356 104.448 61.726 1.00 47.72 C
ATOM 19 O6 G A2116 97.133 103.249 61.516 1.00 50.33 O
ATOM 20 N1 G A2116 96.785 105.412 60.904 1.00 47.00 N
ATOM 21 C2 G A2116 96.971 106.763 61.027 1.00 46.51 C
ATOM 22 N2 G A2116 96.336 107.527 60.128 1.00 45.82 N
ATOM 23 N3 G A2116 97.723 107.324 61.960 1.00 46.98 N
ATOM 24 C4 G A2116 98.284 106.404 62.772 1.00 47.28 C
ATOM 25 P G A2117 98.108 108.153 68.940 1.00 53.56 P
ATOM 26 OP1 G A2117 98.985 108.410 70.124 1.00 47.91 O
ATOM 27 OP2 G A2117 97.767 106.750 68.561 1.00 52.21 O
ATOM 28 O5' G A2117 96.731 108.940 69.098 1.00 48.66 O
TER
ATOM 1 O3' G B2116 98.811 108.874 67.691 1.00 50.12 O
ATOM 2 P G B2117 98.108 108.153 68.940 1.00 53.56 P
ATOM 3 OP1 G B2117 98.985 108.410 70.124 1.00 47.91 O
ATOM 4 OP2 G B2117 97.767 106.750 68.561 1.00 52.21 O
ATOM 5 O5' G B2117 96.731 108.940 69.098 1.00 48.66 O
ATOM 6 C5' G B2117 96.479 109.716 70.269 1.00 43.45 C
ATOM 7 C4' G B2117 95.704 110.955 69.921 1.00 36.70 C
ATOM 8 O4' G B2117 94.411 110.574 69.388 1.00 33.67 O
ATOM 9 C3' G B2117 95.424 111.837 71.128 1.00 35.35 C
ATOM 10 O3' G B2117 95.350 113.190 70.710 1.00 34.27 O
ATOM 11 C2' G B2117 94.066 111.334 71.595 1.00 33.65 C
ATOM 12 O2' G B2117 93.334 112.300 72.317 1.00 33.49 O
ATOM 13 C1' G B2117 93.390 111.010 70.265 1.00 33.83 C
ATOM 14 N9 G B2117 92.392 109.948 70.369 1.00 33.75 N
ATOM 15 C8 G B2117 91.136 109.953 69.811 1.00 34.11 C
ATOM 16 N7 G B2117 90.459 108.867 70.063 1.00 34.17 N
ATOM 17 C5 G B2117 91.319 108.094 70.832 1.00 34.03 C
ATOM 18 C6 G B2117 91.134 106.808 71.403 1.00 35.01 C
ATOM 19 O6 G B2117 90.146 106.067 71.322 1.00 35.78 O
ATOM 20 N1 G B2117 92.252 106.401 72.127 1.00 33.03 N
ATOM 21 C2 G B2117 93.402 107.132 72.276 1.00 32.58 C
ATOM 22 N2 G B2117 94.359 106.572 73.023 1.00 30.11 N
ATOM 23 N3 G B2117 93.595 108.328 71.735 1.00 32.38 N
ATOM 24 C4 G B2117 92.517 108.746 71.035 1.00 32.90 C
ATOM 25 P G B2118 96.696 114.039 70.525 1.00 30.79 P
ATOM 26 OP1 G B2118 97.792 113.092 70.233 1.00 32.73 O
ATOM 27 OP2 G B2118 96.807 114.942 71.683 1.00 28.47 O
ATOM 28 O5' G B2118 96.400 114.868 69.197 1.00 29.03 O
TER
Atoms:
OP1: (101.896,105.150,69.308)
OP2: (100.805,103.448,67.723)
C3': (99.196,108.101,66.571)
C1': (99.597,107.972,64.265)
C5': (101.502,107.220,67.198)
O6: (97.133,103.249,61.516)
O4': (100.840,107.798,64.934)
C8: (99.450,105.443,64.371)
C2: (96.971,106.763,61.027)
C6: (97.356,104.448,61.726)
C5: (98.160,105.032,62.732)
C4: (98.284,106.404,62.772)
P: (101.622,104.677,67.928)
C4': (100.695,108.161,66.332)
C2': (98.638,108.625,65.260)
O2': (98.736,110.032,65.148)
N1: (96.785,105.412,60.904)
N2: (96.336,107.527,60.128)
N3: (97.723,107.324,61.960)
N7: (98.895,104.441,63.747)
N9: (99.129,106.661,63.825)
O5': (100.951,105.885,67.134)
O3': (98.811,108.874,67.691)
OP2: (100.805,103.448,67.723)
C3': (99.196,108.101,66.571)
C1': (99.597,107.972,64.265)
C5': (101.502,107.220,67.198)
O6: (97.133,103.249,61.516)
O4': (100.840,107.798,64.934)
C8: (99.450,105.443,64.371)
C2: (96.971,106.763,61.027)
C6: (97.356,104.448,61.726)
C5: (98.160,105.032,62.732)
C4: (98.284,106.404,62.772)
P: (101.622,104.677,67.928)
C4': (100.695,108.161,66.332)
C2': (98.638,108.625,65.260)
O2': (98.736,110.032,65.148)
N1: (96.785,105.412,60.904)
N2: (96.336,107.527,60.128)
N3: (97.723,107.324,61.960)
N7: (98.895,104.441,63.747)
N9: (99.129,106.661,63.825)
O5': (100.951,105.885,67.134)
O3': (98.811,108.874,67.691)
OP1: (98.985,108.410,70.124)
OP2: (97.767,106.750,68.561)
C3': (95.424,111.837,71.128)
C1': (93.390,111.010,70.265)
C5': (96.479,109.716,70.269)
O6: (90.146,106.067,71.322)
O4': (94.411,110.574,69.388)
C8: (91.136,109.953,69.811)
C2: (93.402,107.132,72.276)
C6: (91.134,106.808,71.403)
C5: (91.319,108.094,70.832)
C4: (92.517,108.746,71.035)
P: (98.108,108.153,68.940)
C4': (95.704,110.955,69.921)
C2': (94.066,111.334,71.595)
O2': (93.334,112.300,72.317)
N1: (92.252,106.401,72.127)
N2: (94.359,106.572,73.023)
N3: (93.595,108.328,71.735)
N7: (90.459,108.867,70.063)
N9: (92.392,109.948,70.369)
O5': (96.731,108.940,69.098)
O3': (95.350,113.190,70.710)
OP2: (97.767,106.750,68.561)
C3': (95.424,111.837,71.128)
C1': (93.390,111.010,70.265)
C5': (96.479,109.716,70.269)
O6: (90.146,106.067,71.322)
O4': (94.411,110.574,69.388)
C8: (91.136,109.953,69.811)
C2: (93.402,107.132,72.276)
C6: (91.134,106.808,71.403)
C5: (91.319,108.094,70.832)
C4: (92.517,108.746,71.035)
P: (98.108,108.153,68.940)
C4': (95.704,110.955,69.921)
C2': (94.066,111.334,71.595)
O2': (93.334,112.300,72.317)
N1: (92.252,106.401,72.127)
N2: (94.359,106.572,73.023)
N3: (93.595,108.328,71.735)
N7: (90.459,108.867,70.063)
N9: (92.392,109.948,70.369)
O5': (96.731,108.940,69.098)
O3': (95.350,113.190,70.710)
Image (generated by PyMOL):