Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:02116:02117
Extra
PDB:
ATOM 1 O3' C A2115 103.393 104.657 67.526 1.00 62.54 O
ATOM 2 P G A2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 3 OP1 G A2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 4 OP2 G A2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 5 O5' G A2116 101.234 105.953 67.556 1.00 62.70 O
ATOM 6 C5' G A2116 101.816 107.276 67.583 1.00 60.26 C
ATOM 7 C4' G A2116 101.041 108.205 66.677 1.00 59.31 C
ATOM 8 O4' G A2116 101.228 107.819 65.292 1.00 58.39 O
ATOM 9 C3' G A2116 99.537 108.158 66.877 1.00 59.04 C
ATOM 10 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 11 C2' G A2116 99.011 108.641 65.538 1.00 58.81 C
ATOM 12 O2' G A2116 99.059 110.045 65.393 1.00 59.25 O
ATOM 13 C1' G A2116 100.012 107.989 64.584 1.00 57.27 C
ATOM 14 N9 G A2116 99.556 106.678 64.144 1.00 55.48 N
ATOM 15 C8 G A2116 99.904 105.457 64.665 1.00 54.66 C
ATOM 16 N7 G A2116 99.335 104.458 64.049 1.00 54.82 N
ATOM 17 C5 G A2116 98.562 105.059 63.065 1.00 55.12 C
ATOM 18 C6 G A2116 97.726 104.486 62.080 1.00 55.46 C
ATOM 19 O6 G A2116 97.498 103.289 61.862 1.00 57.35 O
ATOM 20 N1 G A2116 97.127 105.459 61.293 1.00 54.09 N
ATOM 21 C2 G A2116 97.315 106.811 61.426 1.00 54.36 C
ATOM 22 N2 G A2116 96.643 107.592 60.560 1.00 54.08 N
ATOM 23 N3 G A2116 98.099 107.357 62.335 1.00 53.73 N
ATOM 24 C4 G A2116 98.686 106.429 63.115 1.00 54.72 C
ATOM 25 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 26 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 27 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 28 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
TER
ATOM 1 O3' G B2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 2 P G B2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 3 OP1 G B2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 4 OP2 G B2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 5 O5' G B2117 97.106 109.023 69.429 1.00 59.01 O
ATOM 6 C5' G B2117 96.795 109.796 70.607 1.00 55.08 C
ATOM 7 C4' G B2117 96.032 111.045 70.240 1.00 49.29 C
ATOM 8 O4' G B2117 94.753 110.666 69.670 1.00 47.21 O
ATOM 9 C3' G B2117 95.723 111.946 71.433 1.00 47.46 C
ATOM 10 O3' G B2117 95.687 113.314 71.035 1.00 44.75 O
ATOM 11 C2' G B2117 94.343 111.458 71.861 1.00 46.78 C
ATOM 12 O2' G B2117 93.562 112.422 72.535 1.00 45.82 O
ATOM 13 C1' G B2117 93.707 111.094 70.522 1.00 47.20 C
ATOM 14 N9 G B2117 92.744 110.002 70.662 1.00 47.10 N
ATOM 15 C8 G B2117 91.479 109.961 70.136 1.00 46.72 C
ATOM 16 N7 G B2117 90.827 108.877 70.456 1.00 46.22 N
ATOM 17 C5 G B2117 91.717 108.151 71.232 1.00 45.17 C
ATOM 18 C6 G B2117 91.561 106.902 71.876 1.00 45.21 C
ATOM 19 O6 G B2117 90.574 106.166 71.894 1.00 46.53 O
ATOM 20 N1 G B2117 92.706 106.533 72.563 1.00 44.05 N
ATOM 21 C2 G B2117 93.852 107.268 72.628 1.00 43.50 C
ATOM 22 N2 G B2117 94.839 106.736 73.346 1.00 44.04 N
ATOM 23 N3 G B2117 94.016 108.439 72.036 1.00 45.24 N
ATOM 24 C4 G B2117 92.911 108.820 71.361 1.00 45.56 C
ATOM 25 P G B2118 97.060 114.110 70.771 1.00 40.67 P
ATOM 26 OP1 G B2118 98.042 113.124 70.278 1.00 43.64 O
ATOM 27 OP2 G B2118 97.381 114.911 71.976 1.00 37.50 O
ATOM 28 O5' G B2118 96.671 115.022 69.526 1.00 35.65 O
TER
ATOM 2 P G A2116 101.962 104.716 68.253 1.00 64.39 P
ATOM 3 OP1 G A2116 102.214 105.056 69.677 1.00 65.27 O
ATOM 4 OP2 G A2116 101.203 103.478 67.918 1.00 62.08 O
ATOM 5 O5' G A2116 101.234 105.953 67.556 1.00 62.70 O
ATOM 6 C5' G A2116 101.816 107.276 67.583 1.00 60.26 C
ATOM 7 C4' G A2116 101.041 108.205 66.677 1.00 59.31 C
ATOM 8 O4' G A2116 101.228 107.819 65.292 1.00 58.39 O
ATOM 9 C3' G A2116 99.537 108.158 66.877 1.00 59.04 C
ATOM 10 O3' G A2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 11 C2' G A2116 99.011 108.641 65.538 1.00 58.81 C
ATOM 12 O2' G A2116 99.059 110.045 65.393 1.00 59.25 O
ATOM 13 C1' G A2116 100.012 107.989 64.584 1.00 57.27 C
ATOM 14 N9 G A2116 99.556 106.678 64.144 1.00 55.48 N
ATOM 15 C8 G A2116 99.904 105.457 64.665 1.00 54.66 C
ATOM 16 N7 G A2116 99.335 104.458 64.049 1.00 54.82 N
ATOM 17 C5 G A2116 98.562 105.059 63.065 1.00 55.12 C
ATOM 18 C6 G A2116 97.726 104.486 62.080 1.00 55.46 C
ATOM 19 O6 G A2116 97.498 103.289 61.862 1.00 57.35 O
ATOM 20 N1 G A2116 97.127 105.459 61.293 1.00 54.09 N
ATOM 21 C2 G A2116 97.315 106.811 61.426 1.00 54.36 C
ATOM 22 N2 G A2116 96.643 107.592 60.560 1.00 54.08 N
ATOM 23 N3 G A2116 98.099 107.357 62.335 1.00 53.73 N
ATOM 24 C4 G A2116 98.686 106.429 63.115 1.00 54.72 C
ATOM 25 P G A2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 26 OP1 G A2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 27 OP2 G A2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 28 O5' G A2117 97.106 109.023 69.429 1.00 59.01 O
TER
ATOM 1 O3' G B2116 99.138 108.986 67.951 1.00 59.27 O
ATOM 2 P G B2117 98.533 108.321 69.277 1.00 61.01 P
ATOM 3 OP1 G B2117 99.431 108.738 70.397 1.00 55.31 O
ATOM 4 OP2 G B2117 98.299 106.870 69.019 1.00 60.27 O
ATOM 5 O5' G B2117 97.106 109.023 69.429 1.00 59.01 O
ATOM 6 C5' G B2117 96.795 109.796 70.607 1.00 55.08 C
ATOM 7 C4' G B2117 96.032 111.045 70.240 1.00 49.29 C
ATOM 8 O4' G B2117 94.753 110.666 69.670 1.00 47.21 O
ATOM 9 C3' G B2117 95.723 111.946 71.433 1.00 47.46 C
ATOM 10 O3' G B2117 95.687 113.314 71.035 1.00 44.75 O
ATOM 11 C2' G B2117 94.343 111.458 71.861 1.00 46.78 C
ATOM 12 O2' G B2117 93.562 112.422 72.535 1.00 45.82 O
ATOM 13 C1' G B2117 93.707 111.094 70.522 1.00 47.20 C
ATOM 14 N9 G B2117 92.744 110.002 70.662 1.00 47.10 N
ATOM 15 C8 G B2117 91.479 109.961 70.136 1.00 46.72 C
ATOM 16 N7 G B2117 90.827 108.877 70.456 1.00 46.22 N
ATOM 17 C5 G B2117 91.717 108.151 71.232 1.00 45.17 C
ATOM 18 C6 G B2117 91.561 106.902 71.876 1.00 45.21 C
ATOM 19 O6 G B2117 90.574 106.166 71.894 1.00 46.53 O
ATOM 20 N1 G B2117 92.706 106.533 72.563 1.00 44.05 N
ATOM 21 C2 G B2117 93.852 107.268 72.628 1.00 43.50 C
ATOM 22 N2 G B2117 94.839 106.736 73.346 1.00 44.04 N
ATOM 23 N3 G B2117 94.016 108.439 72.036 1.00 45.24 N
ATOM 24 C4 G B2117 92.911 108.820 71.361 1.00 45.56 C
ATOM 25 P G B2118 97.060 114.110 70.771 1.00 40.67 P
ATOM 26 OP1 G B2118 98.042 113.124 70.278 1.00 43.64 O
ATOM 27 OP2 G B2118 97.381 114.911 71.976 1.00 37.50 O
ATOM 28 O5' G B2118 96.671 115.022 69.526 1.00 35.65 O
TER
Atoms:
OP1: (102.214,105.056,69.677)
OP2: (101.203,103.478,67.918)
C3': (99.537,108.158,66.877)
C1': (100.012,107.989,64.584)
C5': (101.816,107.276,67.583)
O6: (97.498,103.289,61.862)
O4': (101.228,107.819,65.292)
C8: (99.904,105.457,64.665)
C2: (97.315,106.811,61.426)
C6: (97.726,104.486,62.080)
C5: (98.562,105.059,63.065)
C4: (98.686,106.429,63.115)
P: (101.962,104.716,68.253)
C4': (101.041,108.205,66.677)
C2': (99.011,108.641,65.538)
O2': (99.059,110.045,65.393)
N1: (97.127,105.459,61.293)
N2: (96.643,107.592,60.560)
N3: (98.099,107.357,62.335)
N7: (99.335,104.458,64.049)
N9: (99.556,106.678,64.144)
O5': (101.234,105.953,67.556)
O3': (99.138,108.986,67.951)
OP2: (101.203,103.478,67.918)
C3': (99.537,108.158,66.877)
C1': (100.012,107.989,64.584)
C5': (101.816,107.276,67.583)
O6: (97.498,103.289,61.862)
O4': (101.228,107.819,65.292)
C8: (99.904,105.457,64.665)
C2: (97.315,106.811,61.426)
C6: (97.726,104.486,62.080)
C5: (98.562,105.059,63.065)
C4: (98.686,106.429,63.115)
P: (101.962,104.716,68.253)
C4': (101.041,108.205,66.677)
C2': (99.011,108.641,65.538)
O2': (99.059,110.045,65.393)
N1: (97.127,105.459,61.293)
N2: (96.643,107.592,60.560)
N3: (98.099,107.357,62.335)
N7: (99.335,104.458,64.049)
N9: (99.556,106.678,64.144)
O5': (101.234,105.953,67.556)
O3': (99.138,108.986,67.951)
OP1: (99.431,108.738,70.397)
OP2: (98.299,106.870,69.019)
C3': (95.723,111.946,71.433)
C1': (93.707,111.094,70.522)
C5': (96.795,109.796,70.607)
O6: (90.574,106.166,71.894)
O4': (94.753,110.666,69.670)
C8: (91.479,109.961,70.136)
C2: (93.852,107.268,72.628)
C6: (91.561,106.902,71.876)
C5: (91.717,108.151,71.232)
C4: (92.911,108.820,71.361)
P: (98.533,108.321,69.277)
C4': (96.032,111.045,70.240)
C2': (94.343,111.458,71.861)
O2': (93.562,112.422,72.535)
N1: (92.706,106.533,72.563)
N2: (94.839,106.736,73.346)
N3: (94.016,108.439,72.036)
N7: (90.827,108.877,70.456)
N9: (92.744,110.002,70.662)
O5': (97.106,109.023,69.429)
O3': (95.687,113.314,71.035)
OP2: (98.299,106.870,69.019)
C3': (95.723,111.946,71.433)
C1': (93.707,111.094,70.522)
C5': (96.795,109.796,70.607)
O6: (90.574,106.166,71.894)
O4': (94.753,110.666,69.670)
C8: (91.479,109.961,70.136)
C2: (93.852,107.268,72.628)
C6: (91.561,106.902,71.876)
C5: (91.717,108.151,71.232)
C4: (92.911,108.820,71.361)
P: (98.533,108.321,69.277)
C4': (96.032,111.045,70.240)
C2': (94.343,111.458,71.861)
O2': (93.562,112.422,72.535)
N1: (92.706,106.533,72.563)
N2: (94.839,106.736,73.346)
N3: (94.016,108.439,72.036)
N7: (90.827,108.877,70.456)
N9: (92.744,110.002,70.662)
O5': (97.106,109.023,69.429)
O3': (95.687,113.314,71.035)
Image (generated by PyMOL):