ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02116:02117

Extra

PDB:
ATOM 1 O3' C A2115 102.953 104.264 67.203 1.00 55.56 O
ATOM 2 P G A2116 101.509 104.444 67.879 1.00 58.21 P
ATOM 3 OP1 G A2116 101.752 104.870 69.279 1.00 60.38 O
ATOM 4 OP2 G A2116 100.666 103.247 67.612 1.00 55.87 O
ATOM 5 O5' G A2116 100.880 105.675 67.086 1.00 59.59 O
ATOM 6 C5' G A2116 101.435 107.006 67.201 1.00 58.47 C
ATOM 7 C4' G A2116 100.655 107.968 66.335 1.00 57.77 C
ATOM 8 O4' G A2116 100.870 107.648 64.936 1.00 57.51 O
ATOM 9 C3' G A2116 99.150 107.868 66.501 1.00 57.98 C
ATOM 10 O3' G A2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 11 C2' G A2116 98.638 108.412 65.180 1.00 58.05 C
ATOM 12 O2' G A2116 98.714 109.819 65.090 1.00 59.85 O
ATOM 13 C1' G A2116 99.651 107.801 64.218 1.00 57.41 C
ATOM 14 N9 G A2116 99.225 106.483 63.766 1.00 55.13 N
ATOM 15 C8 G A2116 99.585 105.271 64.301 1.00 53.98 C
ATOM 16 N7 G A2116 99.064 104.259 63.669 1.00 54.49 N
ATOM 17 C5 G A2116 98.306 104.837 62.661 1.00 54.61 C
ATOM 18 C6 G A2116 97.514 104.236 61.647 1.00 55.37 C
ATOM 19 O6 G A2116 97.334 103.030 61.418 1.00 57.02 O
ATOM 20 N1 G A2116 96.904 105.194 60.844 1.00 54.17 N
ATOM 21 C2 G A2116 97.049 106.549 60.985 1.00 53.41 C
ATOM 22 N2 G A2116 96.377 107.299 60.107 1.00 53.10 N
ATOM 23 N3 G A2116 97.795 107.121 61.916 1.00 52.55 N
ATOM 24 C4 G A2116 98.388 106.211 62.714 1.00 53.89 C
ATOM 25 P G A2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 26 OP1 G A2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 27 OP2 G A2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 28 O5' G A2117 96.611 108.713 69.035 1.00 56.19 O
TER

ATOM 1 O3' G B2116 98.691 108.592 67.621 1.00 58.25 O
ATOM 2 P G B2117 97.911 107.821 68.788 1.00 60.42 P
ATOM 3 OP1 G B2117 98.803 107.864 69.990 1.00 57.60 O
ATOM 4 OP2 G B2117 97.453 106.506 68.252 1.00 60.59 O
ATOM 5 O5' G B2117 96.611 108.713 69.035 1.00 56.19 O
ATOM 6 C5' G B2117 96.534 109.599 70.161 1.00 49.21 C
ATOM 7 C4' G B2117 95.750 110.832 69.804 1.00 42.97 C
ATOM 8 O4' G B2117 94.450 110.432 69.309 1.00 40.14 O
ATOM 9 C3' G B2117 95.489 111.768 70.976 1.00 40.53 C
ATOM 10 O3' G B2117 95.416 113.099 70.498 1.00 39.34 O
ATOM 11 C2' G B2117 94.131 111.297 71.472 1.00 39.50 C
ATOM 12 O2' G B2117 93.402 112.280 72.166 1.00 38.62 O
ATOM 13 C1' G B2117 93.443 110.936 70.161 1.00 40.83 C
ATOM 14 N9 G B2117 92.433 109.897 70.317 1.00 42.66 N
ATOM 15 C8 G B2117 91.167 109.902 69.789 1.00 43.34 C
ATOM 16 N7 G B2117 90.487 108.829 70.082 1.00 43.23 N
ATOM 17 C5 G B2117 91.355 108.070 70.853 1.00 43.55 C
ATOM 18 C6 G B2117 91.169 106.811 71.466 1.00 43.33 C
ATOM 19 O6 G B2117 90.168 106.095 71.453 1.00 44.72 O
ATOM 20 N1 G B2117 92.301 106.406 72.160 1.00 42.41 N
ATOM 21 C2 G B2117 93.459 107.123 72.262 1.00 42.11 C
ATOM 22 N2 G B2117 94.430 106.561 72.991 1.00 42.81 N
ATOM 23 N3 G B2117 93.648 108.302 71.696 1.00 42.41 N
ATOM 24 C4 G B2117 92.560 108.713 71.011 1.00 42.91 C
ATOM 25 P G B2118 96.729 114.020 70.505 1.00 37.84 P
ATOM 26 OP1 G B2118 97.921 113.158 70.385 1.00 38.20 O
ATOM 27 OP2 G B2118 96.611 114.949 71.657 1.00 36.13 O
ATOM 28 O5' G B2118 96.603 114.826 69.143 1.00 32.88 O
TER

Atoms:
OP1: (101.752,104.870,69.279)
OP2: (100.666,103.247,67.612)
C3': (99.150,107.868,66.501)
C1': (99.651,107.801,64.218)
C5': (101.435,107.006,67.201)
O6: (97.334,103.030,61.418)
O4': (100.870,107.648,64.936)
C8: (99.585,105.271,64.301)
C2: (97.049,106.549,60.985)
C6: (97.514,104.236,61.647)
C5: (98.306,104.837,62.661)
C4: (98.388,106.211,62.714)
P: (101.509,104.444,67.879)
C4': (100.655,107.968,66.335)
C2': (98.638,108.412,65.180)
O2': (98.714,109.819,65.090)
N1: (96.904,105.194,60.844)
N2: (96.377,107.299,60.107)
N3: (97.795,107.121,61.916)
N7: (99.064,104.259,63.669)
N9: (99.225,106.483,63.766)
O5': (100.880,105.675,67.086)
O3': (98.691,108.592,67.621)
OP1: (98.803,107.864,69.990)
OP2: (97.453,106.506,68.252)
C3': (95.489,111.768,70.976)
C1': (93.443,110.936,70.161)
C5': (96.534,109.599,70.161)
O6: (90.168,106.095,71.453)
O4': (94.450,110.432,69.309)
C8: (91.167,109.902,69.789)
C2: (93.459,107.123,72.262)
C6: (91.169,106.811,71.466)
C5: (91.355,108.070,70.853)
C4: (92.560,108.713,71.011)
P: (97.911,107.821,68.788)
C4': (95.750,110.832,69.804)
C2': (94.131,111.297,71.472)
O2': (93.402,112.280,72.166)
N1: (92.301,106.406,72.160)
N2: (94.430,106.561,72.991)
N3: (93.648,108.302,71.696)
N7: (90.487,108.829,70.082)
N9: (92.433,109.897,70.317)
O5': (96.611,108.713,69.035)
O3': (95.416,113.099,70.498)
Image (generated by PyMOL):
PyMOL image
show in jmol