Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E56:E57
Extra
PDB:
ATOM 1 O3' U A 55 9.290 9.729 119.412 1.00 73.71 O
ATOM 2 P A A 56 8.662 11.194 119.529 1.00 78.20 P
ATOM 3 OP1 A A 56 9.692 12.147 120.022 1.00 68.05 O
ATOM 4 OP2 A A 56 7.399 11.011 120.285 1.00 66.41 O
ATOM 5 O5' A A 56 8.320 11.598 118.031 1.00 69.78 O
ATOM 6 C5' A A 56 7.319 12.573 117.738 1.00 56.87 C
ATOM 7 C4' A A 56 6.539 12.126 116.539 1.00 53.11 C
ATOM 8 O4' A A 56 5.460 13.056 116.273 1.00 63.26 O
ATOM 9 C3' A A 56 7.389 12.139 115.288 1.00 63.46 C
ATOM 10 O3' A A 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 11 C2' A A 56 7.077 13.419 114.523 1.00 48.14 C
ATOM 12 O2' A A 56 6.900 13.163 113.150 1.00 91.51 O
ATOM 13 C1' A A 56 5.711 13.791 115.089 1.00 65.58 C
ATOM 14 N9 A A 56 5.484 15.201 115.380 1.00 72.56 N
ATOM 15 C8 A A 56 4.424 15.965 114.971 1.00 74.97 C
ATOM 16 N7 A A 56 4.450 17.190 115.429 1.00 75.66 N
ATOM 17 C5 A A 56 5.615 17.240 116.179 1.00 74.31 C
ATOM 18 C6 A A 56 6.216 18.266 116.921 1.00 74.30 C
ATOM 19 N6 A A 56 5.705 19.491 117.046 1.00 72.52 N
ATOM 20 N1 A A 56 7.377 17.990 117.543 1.00 75.79 N
ATOM 21 C2 A A 56 7.887 16.760 117.424 1.00 82.75 C
ATOM 22 N3 A A 56 7.416 15.711 116.756 1.00 78.27 N
ATOM 23 C4 A A 56 6.265 16.023 116.147 1.00 74.55 C
ATOM 24 P U A 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 25 OP1 U A 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 26 OP2 U A 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 27 O5' U A 57 6.235 9.135 115.500 1.00 79.32 O
TER
ATOM 1 O3' A B 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 2 P U B 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 3 OP1 U B 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 4 OP2 U B 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 5 O5' U B 57 6.235 9.135 115.500 1.00 79.32 O
ATOM 6 C5' U B 57 4.976 8.445 115.471 1.00 84.06 C
ATOM 7 C4' U B 57 4.813 7.521 116.671 1.00 75.08 C
ATOM 8 O4' U B 57 5.803 6.465 116.629 1.00 84.17 O
ATOM 9 C3' U B 57 5.034 8.249 117.992 1.00 61.41 C
ATOM 10 O3' U B 57 4.088 7.862 118.979 1.00 69.67 O
ATOM 11 C2' U B 57 6.473 7.948 118.394 1.00 73.23 C
ATOM 12 O2' U B 57 6.585 7.727 119.778 1.00 81.49 O
ATOM 13 C1' U B 57 6.697 6.608 117.701 1.00 75.42 C
ATOM 14 N1 U B 57 8.038 6.168 117.305 1.00 88.47 N
ATOM 15 C2 U B 57 8.793 5.545 118.277 1.00 94.46 C
ATOM 16 O2 U B 57 8.402 5.397 119.423 1.00 98.48 O
ATOM 17 N3 U B 57 10.019 5.094 117.862 1.00 96.08 N
ATOM 18 C4 U B 57 10.557 5.205 116.601 1.00 93.79 C
ATOM 19 O4 U B 57 11.674 4.736 116.380 1.00 91.05 O
ATOM 20 C5 U B 57 9.719 5.878 115.652 1.00 93.30 C
ATOM 21 C6 U B 57 8.518 6.330 116.031 1.00 91.26 C
ATOM 22 P A B 58 2.710 8.664 119.141 1.00 78.05 P
ATOM 23 OP1 A B 58 2.034 8.181 120.372 1.00 63.67 O
ATOM 24 OP2 A B 58 1.984 8.624 117.843 1.00 69.41 O
ATOM 25 O5' A B 58 3.193 10.150 119.414 1.00 72.26 O
TER
ATOM 2 P A A 56 8.662 11.194 119.529 1.00 78.20 P
ATOM 3 OP1 A A 56 9.692 12.147 120.022 1.00 68.05 O
ATOM 4 OP2 A A 56 7.399 11.011 120.285 1.00 66.41 O
ATOM 5 O5' A A 56 8.320 11.598 118.031 1.00 69.78 O
ATOM 6 C5' A A 56 7.319 12.573 117.738 1.00 56.87 C
ATOM 7 C4' A A 56 6.539 12.126 116.539 1.00 53.11 C
ATOM 8 O4' A A 56 5.460 13.056 116.273 1.00 63.26 O
ATOM 9 C3' A A 56 7.389 12.139 115.288 1.00 63.46 C
ATOM 10 O3' A A 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 11 C2' A A 56 7.077 13.419 114.523 1.00 48.14 C
ATOM 12 O2' A A 56 6.900 13.163 113.150 1.00 91.51 O
ATOM 13 C1' A A 56 5.711 13.791 115.089 1.00 65.58 C
ATOM 14 N9 A A 56 5.484 15.201 115.380 1.00 72.56 N
ATOM 15 C8 A A 56 4.424 15.965 114.971 1.00 74.97 C
ATOM 16 N7 A A 56 4.450 17.190 115.429 1.00 75.66 N
ATOM 17 C5 A A 56 5.615 17.240 116.179 1.00 74.31 C
ATOM 18 C6 A A 56 6.216 18.266 116.921 1.00 74.30 C
ATOM 19 N6 A A 56 5.705 19.491 117.046 1.00 72.52 N
ATOM 20 N1 A A 56 7.377 17.990 117.543 1.00 75.79 N
ATOM 21 C2 A A 56 7.887 16.760 117.424 1.00 82.75 C
ATOM 22 N3 A A 56 7.416 15.711 116.756 1.00 78.27 N
ATOM 23 C4 A A 56 6.265 16.023 116.147 1.00 74.55 C
ATOM 24 P U A 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 25 OP1 U A 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 26 OP2 U A 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 27 O5' U A 57 6.235 9.135 115.500 1.00 79.32 O
TER
ATOM 1 O3' A B 56 7.855 10.915 114.741 1.00 70.96 O
ATOM 2 P U B 57 6.802 9.852 114.186 1.00 68.94 P
ATOM 3 OP1 U B 57 7.551 8.848 113.390 1.00 86.62 O
ATOM 4 OP2 U B 57 5.720 10.642 113.545 1.00 78.41 O
ATOM 5 O5' U B 57 6.235 9.135 115.500 1.00 79.32 O
ATOM 6 C5' U B 57 4.976 8.445 115.471 1.00 84.06 C
ATOM 7 C4' U B 57 4.813 7.521 116.671 1.00 75.08 C
ATOM 8 O4' U B 57 5.803 6.465 116.629 1.00 84.17 O
ATOM 9 C3' U B 57 5.034 8.249 117.992 1.00 61.41 C
ATOM 10 O3' U B 57 4.088 7.862 118.979 1.00 69.67 O
ATOM 11 C2' U B 57 6.473 7.948 118.394 1.00 73.23 C
ATOM 12 O2' U B 57 6.585 7.727 119.778 1.00 81.49 O
ATOM 13 C1' U B 57 6.697 6.608 117.701 1.00 75.42 C
ATOM 14 N1 U B 57 8.038 6.168 117.305 1.00 88.47 N
ATOM 15 C2 U B 57 8.793 5.545 118.277 1.00 94.46 C
ATOM 16 O2 U B 57 8.402 5.397 119.423 1.00 98.48 O
ATOM 17 N3 U B 57 10.019 5.094 117.862 1.00 96.08 N
ATOM 18 C4 U B 57 10.557 5.205 116.601 1.00 93.79 C
ATOM 19 O4 U B 57 11.674 4.736 116.380 1.00 91.05 O
ATOM 20 C5 U B 57 9.719 5.878 115.652 1.00 93.30 C
ATOM 21 C6 U B 57 8.518 6.330 116.031 1.00 91.26 C
ATOM 22 P A B 58 2.710 8.664 119.141 1.00 78.05 P
ATOM 23 OP1 A B 58 2.034 8.181 120.372 1.00 63.67 O
ATOM 24 OP2 A B 58 1.984 8.624 117.843 1.00 69.41 O
ATOM 25 O5' A B 58 3.193 10.150 119.414 1.00 72.26 O
TER
Atoms:
OP1: (9.692,12.147,120.022)
OP2: (7.399,11.011,120.285)
C3': (7.389,12.139,115.288)
C1': (5.711,13.791,115.089)
C5': (7.319,12.573,117.738)
O4': (5.460,13.056,116.273)
C8: (4.424,15.965,114.971)
O2': (6.900,13.163,113.150)
C6: (6.216,18.266,116.921)
C5: (5.615,17.240,116.179)
C4: (6.265,16.023,116.147)
P: (8.662,11.194,119.529)
C4': (6.539,12.126,116.539)
C2': (7.077,13.419,114.523)
C2: (7.887,16.760,117.424)
N1: (7.377,17.990,117.543)
N3: (7.416,15.711,116.756)
N6: (5.705,19.491,117.046)
N7: (4.450,17.190,115.429)
N9: (5.484,15.201,115.380)
O5': (8.320,11.598,118.031)
O3': (7.855,10.915,114.741)
OP2: (7.399,11.011,120.285)
C3': (7.389,12.139,115.288)
C1': (5.711,13.791,115.089)
C5': (7.319,12.573,117.738)
O4': (5.460,13.056,116.273)
C8: (4.424,15.965,114.971)
O2': (6.900,13.163,113.150)
C6: (6.216,18.266,116.921)
C5: (5.615,17.240,116.179)
C4: (6.265,16.023,116.147)
P: (8.662,11.194,119.529)
C4': (6.539,12.126,116.539)
C2': (7.077,13.419,114.523)
C2: (7.887,16.760,117.424)
N1: (7.377,17.990,117.543)
N3: (7.416,15.711,116.756)
N6: (5.705,19.491,117.046)
N7: (4.450,17.190,115.429)
N9: (5.484,15.201,115.380)
O5': (8.320,11.598,118.031)
O3': (7.855,10.915,114.741)
C4: (10.557,5.205,116.601)
N3: (10.019,5.094,117.862)
OP1: (7.551,8.848,113.390)
OP2: (5.720,10.642,113.545)
C2: (8.793,5.545,118.277)
C1': (6.697,6.608,117.701)
C3': (5.034,8.249,117.992)
O5': (6.235,9.135,115.500)
O4': (5.803,6.465,116.629)
C5': (4.976,8.445,115.471)
P: (6.802,9.852,114.186)
C4': (4.813,7.521,116.671)
C2': (6.473,7.948,118.394)
O2': (6.585,7.727,119.778)
N1: (8.038,6.168,117.305)
O4: (11.674,4.736,116.380)
O2: (8.402,5.397,119.423)
C6: (8.518,6.330,116.031)
C5: (9.719,5.878,115.652)
O3': (4.088,7.862,118.979)
N3: (10.019,5.094,117.862)
OP1: (7.551,8.848,113.390)
OP2: (5.720,10.642,113.545)
C2: (8.793,5.545,118.277)
C1': (6.697,6.608,117.701)
C3': (5.034,8.249,117.992)
O5': (6.235,9.135,115.500)
O4': (5.803,6.465,116.629)
C5': (4.976,8.445,115.471)
P: (6.802,9.852,114.186)
C4': (4.813,7.521,116.671)
C2': (6.473,7.948,118.394)
O2': (6.585,7.727,119.778)
N1: (8.038,6.168,117.305)
O4: (11.674,4.736,116.380)
O2: (8.402,5.397,119.423)
C6: (8.518,6.330,116.031)
C5: (9.719,5.878,115.652)
O3': (4.088,7.862,118.979)
Image (generated by PyMOL):