Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:E56:E57
Extra
PDB:
ATOM 1 O3' U A 55 7.492 9.390 118.276 1.00 69.57 O
ATOM 2 P A A 56 6.905 10.855 118.565 1.00 59.07 P
ATOM 3 OP1 A A 56 7.915 11.655 119.300 1.00 52.60 O
ATOM 4 OP2 A A 56 5.563 10.635 119.161 1.00 59.17 O
ATOM 5 O5' A A 56 6.707 11.486 117.119 1.00 56.35 O
ATOM 6 C5' A A 56 5.636 12.385 116.850 1.00 52.06 C
ATOM 7 C4' A A 56 4.864 11.893 115.662 1.00 50.47 C
ATOM 8 O4' A A 56 3.807 12.838 115.352 1.00 51.40 O
ATOM 9 C3' A A 56 5.730 11.848 114.421 1.00 54.50 C
ATOM 10 O3' A A 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 11 C2' A A 56 5.457 13.110 113.613 1.00 55.67 C
ATOM 12 O2' A A 56 5.351 12.874 112.228 1.00 65.12 O
ATOM 13 C1' A A 56 4.085 13.524 114.142 1.00 58.60 C
ATOM 14 N9 A A 56 3.879 14.956 114.354 1.00 61.61 N
ATOM 15 C8 A A 56 2.918 15.746 113.771 1.00 60.59 C
ATOM 16 N7 A A 56 2.968 17.001 114.142 1.00 60.67 N
ATOM 17 C5 A A 56 4.033 17.044 115.031 1.00 62.49 C
ATOM 18 C6 A A 56 4.604 18.093 115.778 1.00 63.97 C
ATOM 19 N6 A A 56 4.165 19.353 115.752 1.00 58.61 N
ATOM 20 N1 A A 56 5.658 17.797 116.568 1.00 64.22 N
ATOM 21 C2 A A 56 6.097 16.535 116.603 1.00 64.60 C
ATOM 22 N3 A A 56 5.646 15.465 115.950 1.00 66.83 N
ATOM 23 C4 A A 56 4.603 15.791 115.171 1.00 63.94 C
ATOM 24 P U A 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 25 OP1 U A 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 26 OP2 U A 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 27 O5' U A 57 4.669 8.759 114.609 1.00 69.30 O
TER
ATOM 1 O3' A B 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 2 P U B 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 3 OP1 U B 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 4 OP2 U B 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 5 O5' U B 57 4.669 8.759 114.609 1.00 69.30 O
ATOM 6 C5' U B 57 3.356 8.182 114.563 1.00 59.34 C
ATOM 7 C4' U B 57 3.106 7.272 115.758 1.00 63.35 C
ATOM 8 O4' U B 57 4.036 6.157 115.731 1.00 67.06 O
ATOM 9 C3' U B 57 3.345 7.987 117.086 1.00 59.14 C
ATOM 10 O3' U B 57 2.365 7.692 118.083 1.00 64.66 O
ATOM 11 C2' U B 57 4.752 7.591 117.523 1.00 61.17 C
ATOM 12 O2' U B 57 4.773 7.343 118.907 1.00 50.25 O
ATOM 13 C1' U B 57 4.928 6.247 116.817 1.00 62.22 C
ATOM 14 N1 U B 57 6.266 5.802 116.405 1.00 65.10 N
ATOM 15 C2 U B 57 7.029 5.133 117.356 1.00 68.46 C
ATOM 16 O2 U B 57 6.645 4.941 118.501 1.00 66.69 O
ATOM 17 N3 U B 57 8.253 4.692 116.917 1.00 66.32 N
ATOM 18 C4 U B 57 8.786 4.851 115.656 1.00 66.96 C
ATOM 19 O4 U B 57 9.906 4.394 115.413 1.00 62.95 O
ATOM 20 C5 U B 57 7.944 5.565 114.735 1.00 67.83 C
ATOM 21 C6 U B 57 6.743 6.008 115.135 1.00 65.88 C
ATOM 22 P A B 58 0.962 8.468 118.112 1.00 56.72 P
ATOM 23 OP1 A B 58 0.227 7.947 119.287 1.00 61.06 O
ATOM 24 OP2 A B 58 0.342 8.384 116.761 1.00 61.15 O
ATOM 25 O5' A B 58 1.357 9.980 118.405 1.00 57.13 O
TER
ATOM 2 P A A 56 6.905 10.855 118.565 1.00 59.07 P
ATOM 3 OP1 A A 56 7.915 11.655 119.300 1.00 52.60 O
ATOM 4 OP2 A A 56 5.563 10.635 119.161 1.00 59.17 O
ATOM 5 O5' A A 56 6.707 11.486 117.119 1.00 56.35 O
ATOM 6 C5' A A 56 5.636 12.385 116.850 1.00 52.06 C
ATOM 7 C4' A A 56 4.864 11.893 115.662 1.00 50.47 C
ATOM 8 O4' A A 56 3.807 12.838 115.352 1.00 51.40 O
ATOM 9 C3' A A 56 5.730 11.848 114.421 1.00 54.50 C
ATOM 10 O3' A A 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 11 C2' A A 56 5.457 13.110 113.613 1.00 55.67 C
ATOM 12 O2' A A 56 5.351 12.874 112.228 1.00 65.12 O
ATOM 13 C1' A A 56 4.085 13.524 114.142 1.00 58.60 C
ATOM 14 N9 A A 56 3.879 14.956 114.354 1.00 61.61 N
ATOM 15 C8 A A 56 2.918 15.746 113.771 1.00 60.59 C
ATOM 16 N7 A A 56 2.968 17.001 114.142 1.00 60.67 N
ATOM 17 C5 A A 56 4.033 17.044 115.031 1.00 62.49 C
ATOM 18 C6 A A 56 4.604 18.093 115.778 1.00 63.97 C
ATOM 19 N6 A A 56 4.165 19.353 115.752 1.00 58.61 N
ATOM 20 N1 A A 56 5.658 17.797 116.568 1.00 64.22 N
ATOM 21 C2 A A 56 6.097 16.535 116.603 1.00 64.60 C
ATOM 22 N3 A A 56 5.646 15.465 115.950 1.00 66.83 N
ATOM 23 C4 A A 56 4.603 15.791 115.171 1.00 63.94 C
ATOM 24 P U A 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 25 OP1 U A 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 26 OP2 U A 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 27 O5' U A 57 4.669 8.759 114.609 1.00 69.30 O
TER
ATOM 1 O3' A B 56 6.262 10.614 113.950 1.00 67.53 O
ATOM 2 P U B 57 5.280 9.507 113.331 1.00 57.54 P
ATOM 3 OP1 U B 57 6.109 8.540 112.574 1.00 70.26 O
ATOM 4 OP2 U B 57 4.187 10.231 112.643 1.00 76.26 O
ATOM 5 O5' U B 57 4.669 8.759 114.609 1.00 69.30 O
ATOM 6 C5' U B 57 3.356 8.182 114.563 1.00 59.34 C
ATOM 7 C4' U B 57 3.106 7.272 115.758 1.00 63.35 C
ATOM 8 O4' U B 57 4.036 6.157 115.731 1.00 67.06 O
ATOM 9 C3' U B 57 3.345 7.987 117.086 1.00 59.14 C
ATOM 10 O3' U B 57 2.365 7.692 118.083 1.00 64.66 O
ATOM 11 C2' U B 57 4.752 7.591 117.523 1.00 61.17 C
ATOM 12 O2' U B 57 4.773 7.343 118.907 1.00 50.25 O
ATOM 13 C1' U B 57 4.928 6.247 116.817 1.00 62.22 C
ATOM 14 N1 U B 57 6.266 5.802 116.405 1.00 65.10 N
ATOM 15 C2 U B 57 7.029 5.133 117.356 1.00 68.46 C
ATOM 16 O2 U B 57 6.645 4.941 118.501 1.00 66.69 O
ATOM 17 N3 U B 57 8.253 4.692 116.917 1.00 66.32 N
ATOM 18 C4 U B 57 8.786 4.851 115.656 1.00 66.96 C
ATOM 19 O4 U B 57 9.906 4.394 115.413 1.00 62.95 O
ATOM 20 C5 U B 57 7.944 5.565 114.735 1.00 67.83 C
ATOM 21 C6 U B 57 6.743 6.008 115.135 1.00 65.88 C
ATOM 22 P A B 58 0.962 8.468 118.112 1.00 56.72 P
ATOM 23 OP1 A B 58 0.227 7.947 119.287 1.00 61.06 O
ATOM 24 OP2 A B 58 0.342 8.384 116.761 1.00 61.15 O
ATOM 25 O5' A B 58 1.357 9.980 118.405 1.00 57.13 O
TER
Atoms:
OP1: (7.915,11.655,119.300)
OP2: (5.563,10.635,119.161)
C3': (5.730,11.848,114.421)
C1': (4.085,13.524,114.142)
C5': (5.636,12.385,116.850)
O4': (3.807,12.838,115.352)
C8: (2.918,15.746,113.771)
O2': (5.351,12.874,112.228)
C6: (4.604,18.093,115.778)
C5: (4.033,17.044,115.031)
C4: (4.603,15.791,115.171)
P: (6.905,10.855,118.565)
C4': (4.864,11.893,115.662)
C2': (5.457,13.110,113.613)
C2: (6.097,16.535,116.603)
N1: (5.658,17.797,116.568)
N3: (5.646,15.465,115.950)
N6: (4.165,19.353,115.752)
N7: (2.968,17.001,114.142)
N9: (3.879,14.956,114.354)
O5': (6.707,11.486,117.119)
O3': (6.262,10.614,113.950)
OP2: (5.563,10.635,119.161)
C3': (5.730,11.848,114.421)
C1': (4.085,13.524,114.142)
C5': (5.636,12.385,116.850)
O4': (3.807,12.838,115.352)
C8: (2.918,15.746,113.771)
O2': (5.351,12.874,112.228)
C6: (4.604,18.093,115.778)
C5: (4.033,17.044,115.031)
C4: (4.603,15.791,115.171)
P: (6.905,10.855,118.565)
C4': (4.864,11.893,115.662)
C2': (5.457,13.110,113.613)
C2: (6.097,16.535,116.603)
N1: (5.658,17.797,116.568)
N3: (5.646,15.465,115.950)
N6: (4.165,19.353,115.752)
N7: (2.968,17.001,114.142)
N9: (3.879,14.956,114.354)
O5': (6.707,11.486,117.119)
O3': (6.262,10.614,113.950)
C4: (8.786,4.851,115.656)
N3: (8.253,4.692,116.917)
OP1: (6.109,8.540,112.574)
OP2: (4.187,10.231,112.643)
C2: (7.029,5.133,117.356)
C1': (4.928,6.247,116.817)
C3': (3.345,7.987,117.086)
O5': (4.669,8.759,114.609)
O4': (4.036,6.157,115.731)
C5': (3.356,8.182,114.563)
P: (5.280,9.507,113.331)
C4': (3.106,7.272,115.758)
C2': (4.752,7.591,117.523)
O2': (4.773,7.343,118.907)
N1: (6.266,5.802,116.405)
O4: (9.906,4.394,115.413)
O2: (6.645,4.941,118.501)
C6: (6.743,6.008,115.135)
C5: (7.944,5.565,114.735)
O3': (2.365,7.692,118.083)
N3: (8.253,4.692,116.917)
OP1: (6.109,8.540,112.574)
OP2: (4.187,10.231,112.643)
C2: (7.029,5.133,117.356)
C1': (4.928,6.247,116.817)
C3': (3.345,7.987,117.086)
O5': (4.669,8.759,114.609)
O4': (4.036,6.157,115.731)
C5': (3.356,8.182,114.563)
P: (5.280,9.507,113.331)
C4': (3.106,7.272,115.758)
C2': (4.752,7.591,117.523)
O2': (4.773,7.343,118.907)
N1: (6.266,5.802,116.405)
O4: (9.906,4.394,115.413)
O2: (6.645,4.941,118.501)
C6: (6.743,6.008,115.135)
C5: (7.944,5.565,114.735)
O3': (2.365,7.692,118.083)
Image (generated by PyMOL):