Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:057:058
Extra
PDB:
ATOM 1 O3' G A 56 61.027 159.928 29.534 1.00 57.84 O
ATOM 2 P A A 57 61.017 160.910 28.259 1.00 56.72 P
ATOM 3 OP1 A A 57 60.124 160.342 27.216 1.00 57.31 O
ATOM 4 OP2 A A 57 62.423 161.245 27.926 1.00 54.58 O
ATOM 5 O5' A A 57 60.313 162.229 28.803 1.00 57.09 O
ATOM 6 C5' A A 57 60.729 162.826 30.037 1.00 59.95 C
ATOM 7 C4' A A 57 61.200 164.242 29.802 1.00 61.72 C
ATOM 8 O4' A A 57 61.665 164.783 31.068 1.00 63.11 O
ATOM 9 C3' A A 57 62.378 164.374 28.840 1.00 63.03 C
ATOM 10 O3' A A 57 62.342 165.658 28.214 1.00 61.28 O
ATOM 11 C2' A A 57 63.573 164.288 29.781 1.00 64.22 C
ATOM 12 O2' A A 57 64.750 164.864 29.250 1.00 66.02 O
ATOM 13 C1' A A 57 63.051 165.072 30.985 1.00 64.57 C
ATOM 14 N9 A A 57 63.679 164.706 32.257 1.00 65.42 N
ATOM 15 C8 A A 57 64.440 165.505 33.078 1.00 66.23 C
ATOM 16 N7 A A 57 64.886 164.893 34.148 1.00 66.57 N
ATOM 17 C5 A A 57 64.384 163.604 34.025 1.00 66.20 C
ATOM 18 C6 A A 57 64.510 162.464 34.829 1.00 65.95 C
ATOM 19 N6 A A 57 65.213 162.432 35.962 1.00 65.55 N
ATOM 20 N1 A A 57 63.885 161.340 34.422 1.00 66.51 N
ATOM 21 C2 A A 57 63.185 161.371 33.281 1.00 65.98 C
ATOM 22 N3 A A 57 62.995 162.376 32.440 1.00 65.02 N
ATOM 23 C4 A A 57 63.631 163.477 32.871 1.00 65.76 C
ATOM 24 P U A 58 62.267 165.766 26.615 1.00 60.15 P
ATOM 25 OP1 U A 58 63.197 164.760 26.030 1.00 57.93 O
ATOM 26 OP2 U A 58 62.443 167.203 26.290 1.00 60.89 O
ATOM 27 O5' U A 58 60.757 165.370 26.278 1.00 57.37 O
TER
ATOM 1 O3' A B 57 62.342 165.658 28.214 1.00 61.28 O
ATOM 2 P U B 58 62.267 165.766 26.615 1.00 60.15 P
ATOM 3 OP1 U B 58 63.197 164.760 26.030 1.00 57.93 O
ATOM 4 OP2 U B 58 62.443 167.203 26.290 1.00 60.89 O
ATOM 5 O5' U B 58 60.757 165.370 26.278 1.00 57.37 O
ATOM 6 C5' U B 58 59.677 166.274 26.577 1.00 54.20 C
ATOM 7 C4' U B 58 58.343 165.637 26.256 1.00 54.50 C
ATOM 8 O4' U B 58 58.352 165.153 24.887 1.00 54.93 O
ATOM 9 C3' U B 58 57.922 164.440 27.100 1.00 54.54 C
ATOM 10 O3' U B 58 56.499 164.419 27.109 1.00 54.49 O
ATOM 11 C2' U B 58 58.403 163.272 26.256 1.00 55.01 C
ATOM 12 O2' U B 58 57.736 162.058 26.518 1.00 57.48 O
ATOM 13 C1' U B 58 58.029 163.781 24.874 1.00 55.35 C
ATOM 14 N1 U B 58 58.727 163.136 23.757 1.00 57.69 N
ATOM 15 C2 U B 58 57.973 162.312 22.931 1.00 57.25 C
ATOM 16 O2 U B 58 56.786 162.077 23.123 1.00 54.10 O
ATOM 17 N3 U B 58 58.663 161.767 21.876 1.00 57.92 N
ATOM 18 C4 U B 58 60.001 161.945 21.575 1.00 58.66 C
ATOM 19 O4 U B 58 60.473 161.384 20.590 1.00 58.52 O
ATOM 20 C5 U B 58 60.718 162.795 22.486 1.00 59.00 C
ATOM 21 C6 U B 58 60.074 163.347 23.521 1.00 58.37 C
ATOM 22 P A B 59 55.697 164.799 28.443 1.00 55.61 P
ATOM 23 OP1 A B 59 54.407 165.405 28.042 1.00 58.84 O
ATOM 24 OP2 A B 59 56.606 165.561 29.338 1.00 54.06 O
ATOM 25 O5' A B 59 55.345 163.381 29.074 1.00 55.75 O
TER
ATOM 2 P A A 57 61.017 160.910 28.259 1.00 56.72 P
ATOM 3 OP1 A A 57 60.124 160.342 27.216 1.00 57.31 O
ATOM 4 OP2 A A 57 62.423 161.245 27.926 1.00 54.58 O
ATOM 5 O5' A A 57 60.313 162.229 28.803 1.00 57.09 O
ATOM 6 C5' A A 57 60.729 162.826 30.037 1.00 59.95 C
ATOM 7 C4' A A 57 61.200 164.242 29.802 1.00 61.72 C
ATOM 8 O4' A A 57 61.665 164.783 31.068 1.00 63.11 O
ATOM 9 C3' A A 57 62.378 164.374 28.840 1.00 63.03 C
ATOM 10 O3' A A 57 62.342 165.658 28.214 1.00 61.28 O
ATOM 11 C2' A A 57 63.573 164.288 29.781 1.00 64.22 C
ATOM 12 O2' A A 57 64.750 164.864 29.250 1.00 66.02 O
ATOM 13 C1' A A 57 63.051 165.072 30.985 1.00 64.57 C
ATOM 14 N9 A A 57 63.679 164.706 32.257 1.00 65.42 N
ATOM 15 C8 A A 57 64.440 165.505 33.078 1.00 66.23 C
ATOM 16 N7 A A 57 64.886 164.893 34.148 1.00 66.57 N
ATOM 17 C5 A A 57 64.384 163.604 34.025 1.00 66.20 C
ATOM 18 C6 A A 57 64.510 162.464 34.829 1.00 65.95 C
ATOM 19 N6 A A 57 65.213 162.432 35.962 1.00 65.55 N
ATOM 20 N1 A A 57 63.885 161.340 34.422 1.00 66.51 N
ATOM 21 C2 A A 57 63.185 161.371 33.281 1.00 65.98 C
ATOM 22 N3 A A 57 62.995 162.376 32.440 1.00 65.02 N
ATOM 23 C4 A A 57 63.631 163.477 32.871 1.00 65.76 C
ATOM 24 P U A 58 62.267 165.766 26.615 1.00 60.15 P
ATOM 25 OP1 U A 58 63.197 164.760 26.030 1.00 57.93 O
ATOM 26 OP2 U A 58 62.443 167.203 26.290 1.00 60.89 O
ATOM 27 O5' U A 58 60.757 165.370 26.278 1.00 57.37 O
TER
ATOM 1 O3' A B 57 62.342 165.658 28.214 1.00 61.28 O
ATOM 2 P U B 58 62.267 165.766 26.615 1.00 60.15 P
ATOM 3 OP1 U B 58 63.197 164.760 26.030 1.00 57.93 O
ATOM 4 OP2 U B 58 62.443 167.203 26.290 1.00 60.89 O
ATOM 5 O5' U B 58 60.757 165.370 26.278 1.00 57.37 O
ATOM 6 C5' U B 58 59.677 166.274 26.577 1.00 54.20 C
ATOM 7 C4' U B 58 58.343 165.637 26.256 1.00 54.50 C
ATOM 8 O4' U B 58 58.352 165.153 24.887 1.00 54.93 O
ATOM 9 C3' U B 58 57.922 164.440 27.100 1.00 54.54 C
ATOM 10 O3' U B 58 56.499 164.419 27.109 1.00 54.49 O
ATOM 11 C2' U B 58 58.403 163.272 26.256 1.00 55.01 C
ATOM 12 O2' U B 58 57.736 162.058 26.518 1.00 57.48 O
ATOM 13 C1' U B 58 58.029 163.781 24.874 1.00 55.35 C
ATOM 14 N1 U B 58 58.727 163.136 23.757 1.00 57.69 N
ATOM 15 C2 U B 58 57.973 162.312 22.931 1.00 57.25 C
ATOM 16 O2 U B 58 56.786 162.077 23.123 1.00 54.10 O
ATOM 17 N3 U B 58 58.663 161.767 21.876 1.00 57.92 N
ATOM 18 C4 U B 58 60.001 161.945 21.575 1.00 58.66 C
ATOM 19 O4 U B 58 60.473 161.384 20.590 1.00 58.52 O
ATOM 20 C5 U B 58 60.718 162.795 22.486 1.00 59.00 C
ATOM 21 C6 U B 58 60.074 163.347 23.521 1.00 58.37 C
ATOM 22 P A B 59 55.697 164.799 28.443 1.00 55.61 P
ATOM 23 OP1 A B 59 54.407 165.405 28.042 1.00 58.84 O
ATOM 24 OP2 A B 59 56.606 165.561 29.338 1.00 54.06 O
ATOM 25 O5' A B 59 55.345 163.381 29.074 1.00 55.75 O
TER
Atoms:
OP1: (60.124,160.342,27.216)
OP2: (62.423,161.245,27.926)
C3': (62.378,164.374,28.840)
C1': (63.051,165.072,30.985)
C5': (60.729,162.826,30.037)
O4': (61.665,164.783,31.068)
C8: (64.440,165.505,33.078)
O2': (64.750,164.864,29.250)
C6: (64.510,162.464,34.829)
C5: (64.384,163.604,34.025)
C4: (63.631,163.477,32.871)
P: (61.017,160.910,28.259)
C4': (61.200,164.242,29.802)
C2': (63.573,164.288,29.781)
C2: (63.185,161.371,33.281)
N1: (63.885,161.340,34.422)
N3: (62.995,162.376,32.440)
N6: (65.213,162.432,35.962)
N7: (64.886,164.893,34.148)
N9: (63.679,164.706,32.257)
O5': (60.313,162.229,28.803)
O3': (62.342,165.658,28.214)
OP2: (62.423,161.245,27.926)
C3': (62.378,164.374,28.840)
C1': (63.051,165.072,30.985)
C5': (60.729,162.826,30.037)
O4': (61.665,164.783,31.068)
C8: (64.440,165.505,33.078)
O2': (64.750,164.864,29.250)
C6: (64.510,162.464,34.829)
C5: (64.384,163.604,34.025)
C4: (63.631,163.477,32.871)
P: (61.017,160.910,28.259)
C4': (61.200,164.242,29.802)
C2': (63.573,164.288,29.781)
C2: (63.185,161.371,33.281)
N1: (63.885,161.340,34.422)
N3: (62.995,162.376,32.440)
N6: (65.213,162.432,35.962)
N7: (64.886,164.893,34.148)
N9: (63.679,164.706,32.257)
O5': (60.313,162.229,28.803)
O3': (62.342,165.658,28.214)
C4: (60.001,161.945,21.575)
N3: (58.663,161.767,21.876)
OP1: (63.197,164.760,26.030)
OP2: (62.443,167.203,26.290)
C2: (57.973,162.312,22.931)
C1': (58.029,163.781,24.874)
C3': (57.922,164.440,27.100)
O5': (60.757,165.370,26.278)
O4': (58.352,165.153,24.887)
C5': (59.677,166.274,26.577)
P: (62.267,165.766,26.615)
C4': (58.343,165.637,26.256)
C2': (58.403,163.272,26.256)
O2': (57.736,162.058,26.518)
N1: (58.727,163.136,23.757)
O4: (60.473,161.384,20.590)
O2: (56.786,162.077,23.123)
C6: (60.074,163.347,23.521)
C5: (60.718,162.795,22.486)
O3': (56.499,164.419,27.109)
N3: (58.663,161.767,21.876)
OP1: (63.197,164.760,26.030)
OP2: (62.443,167.203,26.290)
C2: (57.973,162.312,22.931)
C1': (58.029,163.781,24.874)
C3': (57.922,164.440,27.100)
O5': (60.757,165.370,26.278)
O4': (58.352,165.153,24.887)
C5': (59.677,166.274,26.577)
P: (62.267,165.766,26.615)
C4': (58.343,165.637,26.256)
C2': (58.403,163.272,26.256)
O2': (57.736,162.058,26.518)
N1: (58.727,163.136,23.757)
O4: (60.473,161.384,20.590)
O2: (56.786,162.077,23.123)
C6: (60.074,163.347,23.521)
C5: (60.718,162.795,22.486)
O3': (56.499,164.419,27.109)
Image (generated by PyMOL):