Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2D2K:D7:D8
Extra
PDB:
ATOM 1 O3' U A 6 25.372 9.137 48.765 0.50 59.50 O
ATOM 2 P A A 7 24.622 10.319 47.983 0.50 59.69 P
ATOM 3 OP1 A A 7 24.273 11.360 48.980 0.50 57.81 O
ATOM 4 OP2 A A 7 23.550 9.720 47.148 0.50 56.87 O
ATOM 5 O5' A A 7 25.734 10.905 47.008 0.50 56.81 O
ATOM 6 C5' A A 7 25.366 11.782 45.959 0.50 52.01 C
ATOM 7 C4' A A 7 26.552 12.082 45.082 0.50 50.07 C
ATOM 8 O4' A A 7 27.478 12.922 45.776 0.50 47.14 O
ATOM 9 C3' A A 7 27.358 10.883 44.601 0.50 51.54 C
ATOM 10 O3' A A 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 11 C2' A A 7 28.804 11.401 44.522 0.50 50.98 C
ATOM 12 O2' A A 7 29.291 11.501 43.201 0.50 56.63 O
ATOM 13 C1' A A 7 28.704 12.807 45.124 0.50 47.44 C
ATOM 14 N9 A A 7 29.769 13.322 45.972 0.50 44.42 N
ATOM 15 C8 A A 7 30.848 14.056 45.555 0.50 44.04 C
ATOM 16 N7 A A 7 31.649 14.415 46.524 0.50 43.33 N
ATOM 17 C5 A A 7 31.059 13.878 47.658 0.50 44.45 C
ATOM 18 C6 A A 7 31.421 13.906 49.017 0.50 47.34 C
ATOM 19 N6 A A 7 32.525 14.508 49.476 0.50 49.16 N
ATOM 20 N1 A A 7 30.605 13.283 49.900 0.50 46.96 N
ATOM 21 C2 A A 7 29.508 12.666 49.430 0.50 46.92 C
ATOM 22 N3 A A 7 29.069 12.564 48.172 0.50 45.72 N
ATOM 23 C4 A A 7 29.899 13.199 47.330 0.50 43.91 C
ATOM 24 P U A 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 25 OP1 U A 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 26 OP2 U A 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 27 O5' U A 8 24.654 11.537 43.535 0.50 62.40 O
TER
ATOM 1 O3' A B 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 2 P U B 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U B 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U B 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U B 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U B 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U B 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U B 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U B 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U B 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U B 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U B 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U B 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U B 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U B 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U B 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U B 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U B 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U B 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U B 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
TER
ATOM 2 P A A 7 24.622 10.319 47.983 0.50 59.69 P
ATOM 3 OP1 A A 7 24.273 11.360 48.980 0.50 57.81 O
ATOM 4 OP2 A A 7 23.550 9.720 47.148 0.50 56.87 O
ATOM 5 O5' A A 7 25.734 10.905 47.008 0.50 56.81 O
ATOM 6 C5' A A 7 25.366 11.782 45.959 0.50 52.01 C
ATOM 7 C4' A A 7 26.552 12.082 45.082 0.50 50.07 C
ATOM 8 O4' A A 7 27.478 12.922 45.776 0.50 47.14 O
ATOM 9 C3' A A 7 27.358 10.883 44.601 0.50 51.54 C
ATOM 10 O3' A A 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 11 C2' A A 7 28.804 11.401 44.522 0.50 50.98 C
ATOM 12 O2' A A 7 29.291 11.501 43.201 0.50 56.63 O
ATOM 13 C1' A A 7 28.704 12.807 45.124 0.50 47.44 C
ATOM 14 N9 A A 7 29.769 13.322 45.972 0.50 44.42 N
ATOM 15 C8 A A 7 30.848 14.056 45.555 0.50 44.04 C
ATOM 16 N7 A A 7 31.649 14.415 46.524 0.50 43.33 N
ATOM 17 C5 A A 7 31.059 13.878 47.658 0.50 44.45 C
ATOM 18 C6 A A 7 31.421 13.906 49.017 0.50 47.34 C
ATOM 19 N6 A A 7 32.525 14.508 49.476 0.50 49.16 N
ATOM 20 N1 A A 7 30.605 13.283 49.900 0.50 46.96 N
ATOM 21 C2 A A 7 29.508 12.666 49.430 0.50 46.92 C
ATOM 22 N3 A A 7 29.069 12.564 48.172 0.50 45.72 N
ATOM 23 C4 A A 7 29.899 13.199 47.330 0.50 43.91 C
ATOM 24 P U A 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 25 OP1 U A 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 26 OP2 U A 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 27 O5' U A 8 24.654 11.537 43.535 0.50 62.40 O
TER
ATOM 1 O3' A B 7 26.999 10.550 43.250 0.50 54.38 O
ATOM 2 P U B 8 25.457 10.346 42.823 0.50 57.15 P
ATOM 3 OP1 U B 8 25.028 9.053 43.419 0.50 59.81 O
ATOM 4 OP2 U B 8 25.384 10.535 41.353 0.50 57.56 O
ATOM 5 O5' U B 8 24.654 11.537 43.535 0.50 62.40 O
ATOM 6 C5' U B 8 23.620 12.300 42.876 0.50 62.74 C
ATOM 7 C4' U B 8 22.321 12.199 43.660 0.50 63.31 C
ATOM 8 O4' U B 8 21.840 10.850 43.524 0.50 68.02 O
ATOM 9 C3' U B 8 22.460 12.476 45.162 0.50 63.74 C
ATOM 10 O3' U B 8 21.736 13.645 45.609 0.50 60.91 O
ATOM 11 C2' U B 8 21.713 11.331 45.857 0.50 65.66 C
ATOM 12 O2' U B 8 20.669 11.791 46.675 0.50 67.98 O
ATOM 13 C1' U B 8 21.167 10.496 44.695 0.50 70.69 C
ATOM 14 N1 U B 8 21.161 9.036 44.828 0.50 75.84 N
ATOM 15 C2 U B 8 20.000 8.462 45.305 0.50 78.78 C
ATOM 16 O2 U B 8 19.026 9.119 45.640 0.50 79.44 O
ATOM 17 N3 U B 8 20.016 7.093 45.373 0.50 80.77 N
ATOM 18 C4 U B 8 21.055 6.258 45.022 0.50 80.88 C
ATOM 19 O4 U B 8 20.897 5.036 45.089 0.50 82.76 O
ATOM 20 C5 U B 8 22.231 6.933 44.555 0.50 79.50 C
ATOM 21 C6 U B 8 22.242 8.268 44.478 0.50 77.35 C
ATOM 22 P A B 9 22.024 15.112 45.003 1.00 60.75 P
ATOM 23 OP1 A B 9 20.792 15.914 45.199 1.00 62.19 O
ATOM 24 OP2 A B 9 22.605 15.016 43.647 1.00 61.45 O
ATOM 25 O5' A B 9 23.068 15.737 46.016 1.00 54.83 O
TER
Atoms:
OP1: (24.273,11.360,48.980)
OP2: (23.550,9.720,47.148)
C3': (27.358,10.883,44.601)
C1': (28.704,12.807,45.124)
C5': (25.366,11.782,45.959)
O4': (27.478,12.922,45.776)
C8: (30.848,14.056,45.555)
O2': (29.291,11.501,43.201)
C6: (31.421,13.906,49.017)
C5: (31.059,13.878,47.658)
C4: (29.899,13.199,47.330)
P: (24.622,10.319,47.983)
C4': (26.552,12.082,45.082)
C2': (28.804,11.401,44.522)
C2: (29.508,12.666,49.430)
N1: (30.605,13.283,49.900)
N3: (29.069,12.564,48.172)
N6: (32.525,14.508,49.476)
N7: (31.649,14.415,46.524)
N9: (29.769,13.322,45.972)
O5': (25.734,10.905,47.008)
O3': (26.999,10.550,43.250)
OP2: (23.550,9.720,47.148)
C3': (27.358,10.883,44.601)
C1': (28.704,12.807,45.124)
C5': (25.366,11.782,45.959)
O4': (27.478,12.922,45.776)
C8: (30.848,14.056,45.555)
O2': (29.291,11.501,43.201)
C6: (31.421,13.906,49.017)
C5: (31.059,13.878,47.658)
C4: (29.899,13.199,47.330)
P: (24.622,10.319,47.983)
C4': (26.552,12.082,45.082)
C2': (28.804,11.401,44.522)
C2: (29.508,12.666,49.430)
N1: (30.605,13.283,49.900)
N3: (29.069,12.564,48.172)
N6: (32.525,14.508,49.476)
N7: (31.649,14.415,46.524)
N9: (29.769,13.322,45.972)
O5': (25.734,10.905,47.008)
O3': (26.999,10.550,43.250)
C4: (21.055,6.258,45.022)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
N3: (20.016,7.093,45.373)
OP1: (25.028,9.053,43.419)
OP2: (25.384,10.535,41.353)
C2: (20.000,8.462,45.305)
C1': (21.167,10.496,44.695)
C3': (22.460,12.476,45.162)
O5': (24.654,11.537,43.535)
O4': (21.840,10.850,43.524)
C5': (23.620,12.300,42.876)
P: (25.457,10.346,42.823)
C4': (22.321,12.199,43.660)
C2': (21.713,11.331,45.857)
O2': (20.669,11.791,46.675)
N1: (21.161,9.036,44.828)
O4: (20.897,5.036,45.089)
O2: (19.026,9.119,45.640)
C6: (22.242,8.268,44.478)
C5: (22.231,6.933,44.555)
O3': (21.736,13.645,45.609)
Image (generated by PyMOL):