Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A1335:A1333
Extra
PDB:
ATOM 1 O3' C A1334 -131.800 24.472 22.577 1.00 57.17 O
ATOM 2 P G A1335 -130.225 24.819 22.587 1.00 32.07 P
ATOM 3 OP1 G A1335 -129.935 25.519 23.865 1.00 32.07 O
ATOM 4 OP2 G A1335 -129.923 25.507 21.312 1.00 32.07 O
ATOM 5 O5' G A1335 -129.553 23.377 22.594 1.00 32.07 O
ATOM 6 C5' G A1335 -128.460 23.074 21.746 1.00 32.07 C
ATOM 7 C4' G A1335 -128.707 21.808 20.966 1.00 32.07 C
ATOM 8 O4' G A1335 -130.108 21.457 21.056 1.00 32.07 O
ATOM 9 C3' G A1335 -128.390 21.894 19.477 1.00 32.07 C
ATOM 10 O3' G A1335 -127.078 21.436 19.165 1.00 32.07 O
ATOM 11 C2' G A1335 -129.482 21.068 18.811 1.00 32.07 C
ATOM 12 O2' G A1335 -129.102 19.709 18.743 1.00 32.07 O
ATOM 13 C1' G A1335 -130.641 21.201 19.787 1.00 32.07 C
ATOM 14 N9 G A1335 -131.539 22.316 19.457 1.00 32.44 N
ATOM 15 C8 G A1335 -131.226 23.593 19.069 1.00 32.44 C
ATOM 16 N7 G A1335 -132.275 24.361 18.927 1.00 32.44 N
ATOM 17 C5 G A1335 -133.327 23.546 19.277 1.00 32.44 C
ATOM 18 C6 G A1335 -134.696 23.822 19.326 1.00 32.44 C
ATOM 19 O6 G A1335 -135.250 24.879 19.053 1.00 32.44 O
ATOM 20 N1 G A1335 -135.425 22.715 19.739 1.00 32.44 N
ATOM 21 C2 G A1335 -134.889 21.493 20.068 1.00 32.44 C
ATOM 22 N2 G A1335 -135.738 20.534 20.457 1.00 32.44 N
ATOM 23 N3 G A1335 -133.601 21.224 20.021 1.00 32.44 N
ATOM 24 C4 G A1335 -132.893 22.291 19.617 1.00 32.44 C
ATOM 25 P G A1336 -125.797 21.922 20.019 1.00 19.49 P
ATOM 26 OP1 G A1336 -126.091 21.693 21.450 1.00 19.49 O
ATOM 27 OP2 G A1336 -125.462 23.304 19.573 1.00 19.49 O
ATOM 28 O5' G A1336 -124.670 20.911 19.549 1.00 19.49 O
TER
ATOM 1 O3' G B1332 -137.002 18.058 21.698 1.00 34.85 O
ATOM 2 P U B1333 -136.001 17.661 22.874 1.00 56.19 P
ATOM 3 OP1 U B1333 -134.701 18.295 22.564 1.00 56.19 O
ATOM 4 OP2 U B1333 -136.065 16.200 23.015 1.00 56.19 O
ATOM 5 O5' U B1333 -136.649 18.354 24.141 1.00 56.19 O
ATOM 6 C5' U B1333 -136.893 19.747 24.153 1.00 56.19 C
ATOM 7 C4' U B1333 -137.205 20.228 25.541 1.00 56.19 C
ATOM 8 O4' U B1333 -138.342 19.513 26.051 1.00 56.19 O
ATOM 9 C3' U B1333 -136.101 20.028 26.573 1.00 56.19 C
ATOM 10 O3' U B1333 -135.275 21.169 26.664 1.00 56.19 O
ATOM 11 C2' U B1333 -136.830 19.729 27.889 1.00 56.19 C
ATOM 12 O2' U B1333 -136.858 20.882 28.722 1.00 56.19 O
ATOM 13 C1' U B1333 -138.260 19.403 27.446 1.00 56.19 C
ATOM 14 N1 U B1333 -138.712 18.056 27.839 1.00 57.20 N
ATOM 15 C2 U B1333 -139.416 17.957 29.026 1.00 57.20 C
ATOM 16 O2 U B1333 -139.595 18.904 29.780 1.00 57.20 O
ATOM 17 N3 U B1333 -139.872 16.692 29.306 1.00 57.20 N
ATOM 18 C4 U B1333 -139.719 15.565 28.523 1.00 57.20 C
ATOM 19 O4 U B1333 -140.193 14.502 28.914 1.00 57.20 O
ATOM 20 C5 U B1333 -139.002 15.757 27.297 1.00 57.20 C
ATOM 21 C6 U B1333 -138.549 16.978 26.999 1.00 57.20 C
ATOM 22 P C B1334 -133.693 21.025 26.777 1.00 57.17 P
ATOM 23 OP1 C B1334 -133.374 19.588 26.581 1.00 57.17 O
ATOM 24 OP2 C B1334 -133.293 21.682 28.051 1.00 57.17 O
ATOM 25 O5' C B1334 -133.179 21.892 25.519 1.00 57.17 O
TER
ATOM 2 P G A1335 -130.225 24.819 22.587 1.00 32.07 P
ATOM 3 OP1 G A1335 -129.935 25.519 23.865 1.00 32.07 O
ATOM 4 OP2 G A1335 -129.923 25.507 21.312 1.00 32.07 O
ATOM 5 O5' G A1335 -129.553 23.377 22.594 1.00 32.07 O
ATOM 6 C5' G A1335 -128.460 23.074 21.746 1.00 32.07 C
ATOM 7 C4' G A1335 -128.707 21.808 20.966 1.00 32.07 C
ATOM 8 O4' G A1335 -130.108 21.457 21.056 1.00 32.07 O
ATOM 9 C3' G A1335 -128.390 21.894 19.477 1.00 32.07 C
ATOM 10 O3' G A1335 -127.078 21.436 19.165 1.00 32.07 O
ATOM 11 C2' G A1335 -129.482 21.068 18.811 1.00 32.07 C
ATOM 12 O2' G A1335 -129.102 19.709 18.743 1.00 32.07 O
ATOM 13 C1' G A1335 -130.641 21.201 19.787 1.00 32.07 C
ATOM 14 N9 G A1335 -131.539 22.316 19.457 1.00 32.44 N
ATOM 15 C8 G A1335 -131.226 23.593 19.069 1.00 32.44 C
ATOM 16 N7 G A1335 -132.275 24.361 18.927 1.00 32.44 N
ATOM 17 C5 G A1335 -133.327 23.546 19.277 1.00 32.44 C
ATOM 18 C6 G A1335 -134.696 23.822 19.326 1.00 32.44 C
ATOM 19 O6 G A1335 -135.250 24.879 19.053 1.00 32.44 O
ATOM 20 N1 G A1335 -135.425 22.715 19.739 1.00 32.44 N
ATOM 21 C2 G A1335 -134.889 21.493 20.068 1.00 32.44 C
ATOM 22 N2 G A1335 -135.738 20.534 20.457 1.00 32.44 N
ATOM 23 N3 G A1335 -133.601 21.224 20.021 1.00 32.44 N
ATOM 24 C4 G A1335 -132.893 22.291 19.617 1.00 32.44 C
ATOM 25 P G A1336 -125.797 21.922 20.019 1.00 19.49 P
ATOM 26 OP1 G A1336 -126.091 21.693 21.450 1.00 19.49 O
ATOM 27 OP2 G A1336 -125.462 23.304 19.573 1.00 19.49 O
ATOM 28 O5' G A1336 -124.670 20.911 19.549 1.00 19.49 O
TER
ATOM 1 O3' G B1332 -137.002 18.058 21.698 1.00 34.85 O
ATOM 2 P U B1333 -136.001 17.661 22.874 1.00 56.19 P
ATOM 3 OP1 U B1333 -134.701 18.295 22.564 1.00 56.19 O
ATOM 4 OP2 U B1333 -136.065 16.200 23.015 1.00 56.19 O
ATOM 5 O5' U B1333 -136.649 18.354 24.141 1.00 56.19 O
ATOM 6 C5' U B1333 -136.893 19.747 24.153 1.00 56.19 C
ATOM 7 C4' U B1333 -137.205 20.228 25.541 1.00 56.19 C
ATOM 8 O4' U B1333 -138.342 19.513 26.051 1.00 56.19 O
ATOM 9 C3' U B1333 -136.101 20.028 26.573 1.00 56.19 C
ATOM 10 O3' U B1333 -135.275 21.169 26.664 1.00 56.19 O
ATOM 11 C2' U B1333 -136.830 19.729 27.889 1.00 56.19 C
ATOM 12 O2' U B1333 -136.858 20.882 28.722 1.00 56.19 O
ATOM 13 C1' U B1333 -138.260 19.403 27.446 1.00 56.19 C
ATOM 14 N1 U B1333 -138.712 18.056 27.839 1.00 57.20 N
ATOM 15 C2 U B1333 -139.416 17.957 29.026 1.00 57.20 C
ATOM 16 O2 U B1333 -139.595 18.904 29.780 1.00 57.20 O
ATOM 17 N3 U B1333 -139.872 16.692 29.306 1.00 57.20 N
ATOM 18 C4 U B1333 -139.719 15.565 28.523 1.00 57.20 C
ATOM 19 O4 U B1333 -140.193 14.502 28.914 1.00 57.20 O
ATOM 20 C5 U B1333 -139.002 15.757 27.297 1.00 57.20 C
ATOM 21 C6 U B1333 -138.549 16.978 26.999 1.00 57.20 C
ATOM 22 P C B1334 -133.693 21.025 26.777 1.00 57.17 P
ATOM 23 OP1 C B1334 -133.374 19.588 26.581 1.00 57.17 O
ATOM 24 OP2 C B1334 -133.293 21.682 28.051 1.00 57.17 O
ATOM 25 O5' C B1334 -133.179 21.892 25.519 1.00 57.17 O
TER
Atoms:
OP1: (-129.935,25.519,23.865)
OP2: (-129.923,25.507,21.312)
C3': (-128.390,21.894,19.477)
C1': (-130.641,21.201,19.787)
C5': (-128.460,23.074,21.746)
O6: (-135.250,24.879,19.053)
O4': (-130.108,21.457,21.056)
C8: (-131.226,23.593,19.069)
C2: (-134.889,21.493,20.068)
C6: (-134.696,23.822,19.326)
C5: (-133.327,23.546,19.277)
C4: (-132.893,22.291,19.617)
P: (-130.225,24.819,22.587)
C4': (-128.707,21.808,20.966)
C2': (-129.482,21.068,18.811)
O2': (-129.102,19.709,18.743)
N1: (-135.425,22.715,19.739)
N2: (-135.738,20.534,20.457)
N3: (-133.601,21.224,20.021)
N7: (-132.275,24.361,18.927)
N9: (-131.539,22.316,19.457)
O5': (-129.553,23.377,22.594)
O3': (-127.078,21.436,19.165)
OP2: (-129.923,25.507,21.312)
C3': (-128.390,21.894,19.477)
C1': (-130.641,21.201,19.787)
C5': (-128.460,23.074,21.746)
O6: (-135.250,24.879,19.053)
O4': (-130.108,21.457,21.056)
C8: (-131.226,23.593,19.069)
C2: (-134.889,21.493,20.068)
C6: (-134.696,23.822,19.326)
C5: (-133.327,23.546,19.277)
C4: (-132.893,22.291,19.617)
P: (-130.225,24.819,22.587)
C4': (-128.707,21.808,20.966)
C2': (-129.482,21.068,18.811)
O2': (-129.102,19.709,18.743)
N1: (-135.425,22.715,19.739)
N2: (-135.738,20.534,20.457)
N3: (-133.601,21.224,20.021)
N7: (-132.275,24.361,18.927)
N9: (-131.539,22.316,19.457)
O5': (-129.553,23.377,22.594)
O3': (-127.078,21.436,19.165)
C4: (-139.719,15.565,28.523)
N3: (-139.872,16.692,29.306)
OP1: (-134.701,18.295,22.564)
OP2: (-136.065,16.200,23.015)
C2: (-139.416,17.957,29.026)
C1': (-138.260,19.403,27.446)
C3': (-136.101,20.028,26.573)
O5': (-136.649,18.354,24.141)
O4': (-138.342,19.513,26.051)
C5': (-136.893,19.747,24.153)
P: (-136.001,17.661,22.874)
C4': (-137.205,20.228,25.541)
C2': (-136.830,19.729,27.889)
O2': (-136.858,20.882,28.722)
N1: (-138.712,18.056,27.839)
O4: (-140.193,14.502,28.914)
O2: (-139.595,18.904,29.780)
C6: (-138.549,16.978,26.999)
C5: (-139.002,15.757,27.297)
O3': (-135.275,21.169,26.664)
N3: (-139.872,16.692,29.306)
OP1: (-134.701,18.295,22.564)
OP2: (-136.065,16.200,23.015)
C2: (-139.416,17.957,29.026)
C1': (-138.260,19.403,27.446)
C3': (-136.101,20.028,26.573)
O5': (-136.649,18.354,24.141)
O4': (-138.342,19.513,26.051)
C5': (-136.893,19.747,24.153)
P: (-136.001,17.661,22.874)
C4': (-137.205,20.228,25.541)
C2': (-136.830,19.729,27.889)
O2': (-136.858,20.882,28.722)
N1: (-138.712,18.056,27.839)
O4: (-140.193,14.502,28.914)
O2: (-139.595,18.904,29.780)
C6: (-138.549,16.978,26.999)
C5: (-139.002,15.757,27.297)
O3': (-135.275,21.169,26.664)
Image (generated by PyMOL):