ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:0947:0948

Extra

PDB:
ATOM 1 O3' C A 946 64.633 55.723 120.188 1.00 76.84 O
ATOM 2 P G A 947 66.034 55.809 120.970 1.00 80.89 P
ATOM 3 OP1 G A 947 65.744 56.098 122.399 1.00 79.03 O
ATOM 4 OP2 G A 947 66.938 56.714 120.207 1.00 81.62 O
ATOM 5 O5' G A 947 66.596 54.323 120.831 1.00 84.30 O
ATOM 6 C5' G A 947 66.790 53.501 121.989 1.00 91.48 C
ATOM 7 C4' G A 947 66.540 52.046 121.663 1.00 94.60 C
ATOM 8 O4' G A 947 66.973 51.238 122.792 1.00 98.41 O
ATOM 9 C3' G A 947 65.095 51.641 121.384 1.00 94.67 C
ATOM 10 O3' G A 947 64.769 51.728 119.993 1.00 90.00 O
ATOM 11 C2' G A 947 65.035 50.222 121.939 1.00 98.34 C
ATOM 12 O2' G A 947 65.591 49.265 121.057 1.00 99.32 O
ATOM 13 C1' G A 947 65.937 50.353 123.171 1.00101.48 C
ATOM 14 N9 G A 947 65.322 50.884 124.391 1.00106.13 N
ATOM 15 C8 G A 947 65.958 51.066 125.599 1.00107.28 C
ATOM 16 N7 G A 947 65.180 51.565 126.521 1.00109.05 N
ATOM 17 C5 G A 947 63.951 51.723 125.892 1.00110.16 C
ATOM 18 C6 G A 947 62.715 52.224 126.396 1.00111.42 C
ATOM 19 O6 G A 947 62.456 52.640 127.535 1.00112.01 O
ATOM 20 N1 G A 947 61.721 52.210 125.420 1.00112.05 N
ATOM 21 C2 G A 947 61.889 51.772 124.127 1.00111.97 C
ATOM 22 N2 G A 947 60.806 51.838 123.332 1.00112.63 N
ATOM 23 N3 G A 947 63.032 51.303 123.646 1.00110.59 N
ATOM 24 C4 G A 947 64.015 51.307 124.576 1.00108.95 C
ATOM 25 P A A 948 63.295 51.311 119.479 1.00 86.86 P
ATOM 26 OP1 A A 948 62.298 52.279 120.002 1.00 87.07 O
ATOM 27 OP2 A A 948 63.108 49.864 119.748 1.00 88.55 O
ATOM 28 O5' A A 948 63.380 51.485 117.896 1.00 82.90 O
TER

ATOM 1 O3' G B 947 64.769 51.728 119.993 1.00 90.00 O
ATOM 2 P A B 948 63.295 51.311 119.479 1.00 86.86 P
ATOM 3 OP1 A B 948 62.298 52.279 120.002 1.00 87.07 O
ATOM 4 OP2 A B 948 63.108 49.864 119.748 1.00 88.55 O
ATOM 5 O5' A B 948 63.380 51.485 117.896 1.00 82.90 O
ATOM 6 C5' A B 948 64.094 50.534 117.079 1.00 76.40 C
ATOM 7 C4' A B 948 64.371 51.114 115.709 1.00 72.53 C
ATOM 8 O4' A B 948 63.115 51.499 115.088 1.00 71.55 O
ATOM 9 C3' A B 948 65.205 52.385 115.677 1.00 70.27 C
ATOM 10 O3' A B 948 66.601 52.099 115.763 1.00 68.34 O
ATOM 11 C2' A B 948 64.792 53.002 114.346 1.00 69.77 C
ATOM 12 O2' A B 948 65.403 52.392 113.227 1.00 69.50 O
ATOM 13 C1' A B 948 63.295 52.685 114.326 1.00 69.35 C
ATOM 14 N9 A B 948 62.488 53.745 114.935 1.00 67.58 N
ATOM 15 C8 A B 948 61.671 53.652 116.034 1.00 67.20 C
ATOM 16 N7 A B 948 61.112 54.787 116.377 1.00 67.45 N
ATOM 17 C5 A B 948 61.586 55.688 115.436 1.00 66.46 C
ATOM 18 C6 A B 948 61.375 57.064 115.257 1.00 65.63 C
ATOM 19 N6 A B 948 60.617 57.807 116.064 1.00 64.68 N
ATOM 20 N1 A B 948 61.981 57.661 114.209 1.00 66.40 N
ATOM 21 C2 A B 948 62.753 56.918 113.406 1.00 67.05 C
ATOM 22 N3 A B 948 63.039 55.621 113.478 1.00 67.72 N
ATOM 23 C4 A B 948 62.418 55.057 114.529 1.00 67.47 C
ATOM 24 P C B 949 67.650 53.285 116.057 1.00 65.22 P
ATOM 25 OP1 C B 949 68.847 52.691 116.686 1.00 67.43 O
ATOM 26 OP2 C B 949 66.947 54.396 116.737 1.00 65.71 O
ATOM 27 O5' C B 949 68.081 53.766 114.603 1.00 66.12 O
TER

Atoms:
OP1: (65.744,56.098,122.399)
OP2: (66.938,56.714,120.207)
C3': (65.095,51.641,121.384)
C1': (65.937,50.353,123.171)
C5': (66.790,53.501,121.989)
O6: (62.456,52.640,127.535)
O4': (66.973,51.238,122.792)
C8: (65.958,51.066,125.599)
C2: (61.889,51.772,124.127)
C6: (62.715,52.224,126.396)
C5: (63.951,51.723,125.892)
C4: (64.015,51.307,124.576)
P: (66.034,55.809,120.970)
C4': (66.540,52.046,121.663)
C2': (65.035,50.222,121.939)
O2': (65.591,49.265,121.057)
N1: (61.721,52.210,125.420)
N2: (60.806,51.838,123.332)
N3: (63.032,51.303,123.646)
N7: (65.180,51.565,126.521)
N9: (65.322,50.884,124.391)
O5': (66.596,54.323,120.831)
O3': (64.769,51.728,119.993)
OP1: (62.298,52.279,120.002)
OP2: (63.108,49.864,119.748)
C3': (65.205,52.385,115.677)
C1': (63.295,52.685,114.326)
C5': (64.094,50.534,117.079)
O4': (63.115,51.499,115.088)
C8: (61.671,53.652,116.034)
O2': (65.403,52.392,113.227)
C6: (61.375,57.064,115.257)
C5: (61.586,55.688,115.436)
C4: (62.418,55.057,114.529)
P: (63.295,51.311,119.479)
C4': (64.371,51.114,115.709)
C2': (64.792,53.002,114.346)
C2: (62.753,56.918,113.406)
N1: (61.981,57.661,114.209)
N3: (63.039,55.621,113.478)
N6: (60.617,57.807,116.064)
N7: (61.112,54.787,116.377)
N9: (62.488,53.745,114.935)
O5': (63.380,51.485,117.896)
O3': (66.601,52.099,115.763)
Image (generated by PyMOL):
PyMOL image
show in jmol