ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:0947:0948

Extra

PDB:
ATOM 1 O3' C A 946 64.564 56.957 120.970 1.00 70.99 O
ATOM 2 P G A 947 66.014 57.015 121.666 1.00 73.34 P
ATOM 3 OP1 G A 947 65.799 57.163 123.132 1.00 70.12 O
ATOM 4 OP2 G A 947 66.870 58.000 120.948 1.00 72.83 O
ATOM 5 O5' G A 947 66.584 55.559 121.344 1.00 75.90 O
ATOM 6 C5' G A 947 66.835 54.620 122.394 1.00 83.77 C
ATOM 7 C4' G A 947 66.631 53.198 121.917 1.00 87.17 C
ATOM 8 O4' G A 947 67.135 52.310 122.958 1.00 92.28 O
ATOM 9 C3' G A 947 65.192 52.749 121.661 1.00 86.99 C
ATOM 10 O3' G A 947 64.772 52.882 120.305 1.00 80.21 O
ATOM 11 C2' G A 947 65.207 51.300 122.130 1.00 91.95 C
ATOM 12 O2' G A 947 65.774 50.421 121.176 1.00 92.74 O
ATOM 13 C1' G A 947 66.118 51.408 123.354 1.00 95.76 C
ATOM 14 N9 G A 947 65.481 51.958 124.556 1.00101.86 N
ATOM 15 C8 G A 947 66.121 52.317 125.721 1.00103.36 C
ATOM 16 N7 G A 947 65.313 52.809 126.623 1.00106.24 N
ATOM 17 C5 G A 947 64.057 52.771 126.026 1.00107.76 C
ATOM 18 C6 G A 947 62.783 53.184 126.523 1.00109.30 C
ATOM 19 O6 G A 947 62.507 53.686 127.625 1.00109.70 O
ATOM 20 N1 G A 947 61.772 52.963 125.587 1.00110.40 N
ATOM 21 C2 G A 947 61.956 52.421 124.334 1.00109.98 C
ATOM 22 N2 G A 947 60.851 52.290 123.573 1.00110.04 N
ATOM 23 N3 G A 947 63.134 52.036 123.860 1.00108.05 N
ATOM 24 C4 G A 947 64.136 52.239 124.752 1.00106.17 C
ATOM 25 P A A 948 63.296 52.380 119.870 1.00 76.98 P
ATOM 26 OP1 A A 948 62.279 53.296 120.448 1.00 77.92 O
ATOM 27 OP2 A A 948 63.187 50.925 120.129 1.00 78.23 O
ATOM 28 O5' A A 948 63.286 52.556 118.289 1.00 72.43 O
TER

ATOM 1 O3' G B 947 64.772 52.882 120.305 1.00 80.21 O
ATOM 2 P A B 948 63.296 52.380 119.870 1.00 76.98 P
ATOM 3 OP1 A B 948 62.279 53.296 120.448 1.00 77.92 O
ATOM 4 OP2 A B 948 63.187 50.925 120.129 1.00 78.23 O
ATOM 5 O5' A B 948 63.286 52.556 118.289 1.00 72.43 O
ATOM 6 C5' A B 948 63.945 51.604 117.437 1.00 63.84 C
ATOM 7 C4' A B 948 64.236 52.220 116.094 1.00 58.97 C
ATOM 8 O4' A B 948 62.992 52.661 115.488 1.00 58.30 O
ATOM 9 C3' A B 948 65.100 53.467 116.129 1.00 56.49 C
ATOM 10 O3' A B 948 66.480 53.132 116.198 1.00 53.56 O
ATOM 11 C2' A B 948 64.705 54.164 114.835 1.00 56.33 C
ATOM 12 O2' A B 948 65.310 53.583 113.701 1.00 54.67 O
ATOM 13 C1' A B 948 63.200 53.883 114.797 1.00 57.16 C
ATOM 14 N9 A B 948 62.396 54.917 115.458 1.00 57.65 N
ATOM 15 C8 A B 948 61.577 54.765 116.551 1.00 58.27 C
ATOM 16 N7 A B 948 60.994 55.875 116.935 1.00 58.78 N
ATOM 17 C5 A B 948 61.456 56.823 116.032 1.00 57.36 C
ATOM 18 C6 A B 948 61.211 58.196 115.899 1.00 55.41 C
ATOM 19 N6 A B 948 60.407 58.888 116.704 1.00 54.96 N
ATOM 20 N1 A B 948 61.825 58.845 114.895 1.00 55.30 N
ATOM 21 C2 A B 948 62.628 58.158 114.083 1.00 55.79 C
ATOM 22 N3 A B 948 62.941 56.871 114.103 1.00 57.81 N
ATOM 23 C4 A B 948 62.315 56.247 115.115 1.00 57.60 C
ATOM 24 P C B 949 67.563 54.263 116.554 1.00 51.48 P
ATOM 25 OP1 C B 949 68.714 53.630 117.229 1.00 55.33 O
ATOM 26 OP2 C B 949 66.871 55.396 117.209 1.00 52.72 O
ATOM 27 O5' C B 949 68.089 54.729 115.130 1.00 52.07 O
TER

Atoms:
OP1: (65.799,57.163,123.132)
OP2: (66.870,58.000,120.948)
C3': (65.192,52.749,121.661)
C1': (66.118,51.408,123.354)
C5': (66.835,54.620,122.394)
O6: (62.507,53.686,127.625)
O4': (67.135,52.310,122.958)
C8: (66.121,52.317,125.721)
C2: (61.956,52.421,124.334)
C6: (62.783,53.184,126.523)
C5: (64.057,52.771,126.026)
C4: (64.136,52.239,124.752)
P: (66.014,57.015,121.666)
C4': (66.631,53.198,121.917)
C2': (65.207,51.300,122.130)
O2': (65.774,50.421,121.176)
N1: (61.772,52.963,125.587)
N2: (60.851,52.290,123.573)
N3: (63.134,52.036,123.860)
N7: (65.313,52.809,126.623)
N9: (65.481,51.958,124.556)
O5': (66.584,55.559,121.344)
O3': (64.772,52.882,120.305)
OP1: (62.279,53.296,120.448)
OP2: (63.187,50.925,120.129)
C3': (65.100,53.467,116.129)
C1': (63.200,53.883,114.797)
C5': (63.945,51.604,117.437)
O4': (62.992,52.661,115.488)
C8: (61.577,54.765,116.551)
O2': (65.310,53.583,113.701)
C6: (61.211,58.196,115.899)
C5: (61.456,56.823,116.032)
C4: (62.315,56.247,115.115)
P: (63.296,52.380,119.870)
C4': (64.236,52.220,116.094)
C2': (64.705,54.164,114.835)
C2: (62.628,58.158,114.083)
N1: (61.825,58.845,114.895)
N3: (62.941,56.871,114.103)
N6: (60.407,58.888,116.704)
N7: (60.994,55.875,116.935)
N9: (62.396,54.917,115.458)
O5': (63.286,52.556,118.289)
O3': (66.480,53.132,116.198)
Image (generated by PyMOL):
PyMOL image
show in jmol