Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0947:0948
Extra
PDB:
ATOM 1 O3' C A 946 64.442 57.217 121.056 1.00 68.94 O
ATOM 2 P G A 947 65.915 57.235 121.703 1.00 71.26 P
ATOM 3 OP1 G A 947 65.755 57.336 123.179 1.00 68.82 O
ATOM 4 OP2 G A 947 66.753 58.238 120.990 1.00 71.89 O
ATOM 5 O5' G A 947 66.458 55.788 121.309 1.00 74.20 O
ATOM 6 C5' G A 947 66.819 54.837 122.314 1.00 81.43 C
ATOM 7 C4' G A 947 66.639 53.419 121.814 1.00 84.75 C
ATOM 8 O4' G A 947 67.247 52.526 122.792 1.00 89.73 O
ATOM 9 C3' G A 947 65.203 52.926 121.645 1.00 84.93 C
ATOM 10 O3' G A 947 64.701 53.076 120.321 1.00 79.17 O
ATOM 11 C2' G A 947 65.297 51.468 122.081 1.00 89.46 C
ATOM 12 O2' G A 947 65.822 50.623 121.076 1.00 90.35 O
ATOM 13 C1' G A 947 66.290 51.582 123.238 1.00 93.14 C
ATOM 14 N9 G A 947 65.725 52.082 124.496 1.00 98.54 N
ATOM 15 C8 G A 947 66.433 52.441 125.620 1.00 99.87 C
ATOM 16 N7 G A 947 65.675 52.878 126.590 1.00102.42 N
ATOM 17 C5 G A 947 64.382 52.802 126.085 1.00103.65 C
ATOM 18 C6 G A 947 63.132 53.147 126.683 1.00105.01 C
ATOM 19 O6 G A 947 62.916 53.607 127.815 1.00105.14 O
ATOM 20 N1 G A 947 62.065 52.907 125.817 1.00106.28 N
ATOM 21 C2 G A 947 62.178 52.403 124.539 1.00106.06 C
ATOM 22 N2 G A 947 61.026 52.237 123.858 1.00105.72 N
ATOM 23 N3 G A 947 63.334 52.082 123.971 1.00104.20 N
ATOM 24 C4 G A 947 64.389 52.305 124.795 1.00102.38 C
ATOM 25 P A A 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 26 OP1 A A 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 27 OP2 A A 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 28 O5' A A 948 63.144 52.681 118.376 1.00 72.60 O
TER
ATOM 1 O3' G B 947 64.701 53.076 120.321 1.00 79.17 O
ATOM 2 P A B 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 3 OP1 A B 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 4 OP2 A B 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 5 O5' A B 948 63.144 52.681 118.376 1.00 72.60 O
ATOM 6 C5' A B 948 63.851 51.748 117.537 1.00 63.70 C
ATOM 7 C4' A B 948 64.134 52.365 116.189 1.00 58.93 C
ATOM 8 O4' A B 948 62.883 52.790 115.580 1.00 57.81 O
ATOM 9 C3' A B 948 64.992 53.619 116.206 1.00 56.11 C
ATOM 10 O3' A B 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 11 C2' A B 948 64.583 54.303 114.909 1.00 55.40 C
ATOM 12 O2' A B 948 65.187 53.722 113.775 1.00 53.20 O
ATOM 13 C1' A B 948 63.078 54.010 114.881 1.00 56.33 C
ATOM 14 N9 A B 948 62.271 55.046 115.539 1.00 56.42 N
ATOM 15 C8 A B 948 61.436 54.894 116.622 1.00 56.70 C
ATOM 16 N7 A B 948 60.860 56.007 117.008 1.00 57.16 N
ATOM 17 C5 A B 948 61.341 56.957 116.117 1.00 55.79 C
ATOM 18 C6 A B 948 61.111 58.337 115.991 1.00 54.07 C
ATOM 19 N6 A B 948 60.307 59.033 116.792 1.00 53.15 N
ATOM 20 N1 A B 948 61.742 58.988 114.997 1.00 53.81 N
ATOM 21 C2 A B 948 62.548 58.297 114.189 1.00 53.42 C
ATOM 22 N3 A B 948 62.847 57.005 114.204 1.00 55.33 N
ATOM 23 C4 A B 948 62.205 56.380 115.204 1.00 55.92 C
ATOM 24 P C B 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 25 OP1 C B 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 26 OP2 C B 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 27 O5' C B 949 68.008 54.879 115.188 1.00 51.36 O
TER
ATOM 2 P G A 947 65.915 57.235 121.703 1.00 71.26 P
ATOM 3 OP1 G A 947 65.755 57.336 123.179 1.00 68.82 O
ATOM 4 OP2 G A 947 66.753 58.238 120.990 1.00 71.89 O
ATOM 5 O5' G A 947 66.458 55.788 121.309 1.00 74.20 O
ATOM 6 C5' G A 947 66.819 54.837 122.314 1.00 81.43 C
ATOM 7 C4' G A 947 66.639 53.419 121.814 1.00 84.75 C
ATOM 8 O4' G A 947 67.247 52.526 122.792 1.00 89.73 O
ATOM 9 C3' G A 947 65.203 52.926 121.645 1.00 84.93 C
ATOM 10 O3' G A 947 64.701 53.076 120.321 1.00 79.17 O
ATOM 11 C2' G A 947 65.297 51.468 122.081 1.00 89.46 C
ATOM 12 O2' G A 947 65.822 50.623 121.076 1.00 90.35 O
ATOM 13 C1' G A 947 66.290 51.582 123.238 1.00 93.14 C
ATOM 14 N9 G A 947 65.725 52.082 124.496 1.00 98.54 N
ATOM 15 C8 G A 947 66.433 52.441 125.620 1.00 99.87 C
ATOM 16 N7 G A 947 65.675 52.878 126.590 1.00102.42 N
ATOM 17 C5 G A 947 64.382 52.802 126.085 1.00103.65 C
ATOM 18 C6 G A 947 63.132 53.147 126.683 1.00105.01 C
ATOM 19 O6 G A 947 62.916 53.607 127.815 1.00105.14 O
ATOM 20 N1 G A 947 62.065 52.907 125.817 1.00106.28 N
ATOM 21 C2 G A 947 62.178 52.403 124.539 1.00106.06 C
ATOM 22 N2 G A 947 61.026 52.237 123.858 1.00105.72 N
ATOM 23 N3 G A 947 63.334 52.082 123.971 1.00104.20 N
ATOM 24 C4 G A 947 64.389 52.305 124.795 1.00102.38 C
ATOM 25 P A A 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 26 OP1 A A 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 27 OP2 A A 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 28 O5' A A 948 63.144 52.681 118.376 1.00 72.60 O
TER
ATOM 1 O3' G B 947 64.701 53.076 120.321 1.00 79.17 O
ATOM 2 P A B 948 63.207 52.571 119.964 1.00 76.52 P
ATOM 3 OP1 A B 948 62.223 53.527 120.534 1.00 77.59 O
ATOM 4 OP2 A B 948 63.090 51.130 120.295 1.00 77.14 O
ATOM 5 O5' A B 948 63.144 52.681 118.376 1.00 72.60 O
ATOM 6 C5' A B 948 63.851 51.748 117.537 1.00 63.70 C
ATOM 7 C4' A B 948 64.134 52.365 116.189 1.00 58.93 C
ATOM 8 O4' A B 948 62.883 52.790 115.580 1.00 57.81 O
ATOM 9 C3' A B 948 64.992 53.619 116.206 1.00 56.11 C
ATOM 10 O3' A B 948 66.376 53.290 116.254 1.00 52.97 O
ATOM 11 C2' A B 948 64.583 54.303 114.909 1.00 55.40 C
ATOM 12 O2' A B 948 65.187 53.722 113.775 1.00 53.20 O
ATOM 13 C1' A B 948 63.078 54.010 114.881 1.00 56.33 C
ATOM 14 N9 A B 948 62.271 55.046 115.539 1.00 56.42 N
ATOM 15 C8 A B 948 61.436 54.894 116.622 1.00 56.70 C
ATOM 16 N7 A B 948 60.860 56.007 117.008 1.00 57.16 N
ATOM 17 C5 A B 948 61.341 56.957 116.117 1.00 55.79 C
ATOM 18 C6 A B 948 61.111 58.337 115.991 1.00 54.07 C
ATOM 19 N6 A B 948 60.307 59.033 116.792 1.00 53.15 N
ATOM 20 N1 A B 948 61.742 58.988 114.997 1.00 53.81 N
ATOM 21 C2 A B 948 62.548 58.297 114.189 1.00 53.42 C
ATOM 22 N3 A B 948 62.847 57.005 114.204 1.00 55.33 N
ATOM 23 C4 A B 948 62.205 56.380 115.204 1.00 55.92 C
ATOM 24 P C B 949 67.462 54.423 116.608 1.00 51.69 P
ATOM 25 OP1 C B 949 68.593 53.775 117.307 1.00 54.65 O
ATOM 26 OP2 C B 949 66.781 55.580 117.243 1.00 53.31 O
ATOM 27 O5' C B 949 68.008 54.879 115.188 1.00 51.36 O
TER
Atoms:
OP1: (65.755,57.336,123.179)
OP2: (66.753,58.238,120.990)
C3': (65.203,52.926,121.645)
C1': (66.290,51.582,123.238)
C5': (66.819,54.837,122.314)
O6: (62.916,53.607,127.815)
O4': (67.247,52.526,122.792)
C8: (66.433,52.441,125.620)
C2: (62.178,52.403,124.539)
C6: (63.132,53.147,126.683)
C5: (64.382,52.802,126.085)
C4: (64.389,52.305,124.795)
P: (65.915,57.235,121.703)
C4': (66.639,53.419,121.814)
C2': (65.297,51.468,122.081)
O2': (65.822,50.623,121.076)
N1: (62.065,52.907,125.817)
N2: (61.026,52.237,123.858)
N3: (63.334,52.082,123.971)
N7: (65.675,52.878,126.590)
N9: (65.725,52.082,124.496)
O5': (66.458,55.788,121.309)
O3': (64.701,53.076,120.321)
OP2: (66.753,58.238,120.990)
C3': (65.203,52.926,121.645)
C1': (66.290,51.582,123.238)
C5': (66.819,54.837,122.314)
O6: (62.916,53.607,127.815)
O4': (67.247,52.526,122.792)
C8: (66.433,52.441,125.620)
C2: (62.178,52.403,124.539)
C6: (63.132,53.147,126.683)
C5: (64.382,52.802,126.085)
C4: (64.389,52.305,124.795)
P: (65.915,57.235,121.703)
C4': (66.639,53.419,121.814)
C2': (65.297,51.468,122.081)
O2': (65.822,50.623,121.076)
N1: (62.065,52.907,125.817)
N2: (61.026,52.237,123.858)
N3: (63.334,52.082,123.971)
N7: (65.675,52.878,126.590)
N9: (65.725,52.082,124.496)
O5': (66.458,55.788,121.309)
O3': (64.701,53.076,120.321)
OP1: (62.223,53.527,120.534)
OP2: (63.090,51.130,120.295)
C3': (64.992,53.619,116.206)
C1': (63.078,54.010,114.881)
C5': (63.851,51.748,117.537)
O4': (62.883,52.790,115.580)
C8: (61.436,54.894,116.622)
O2': (65.187,53.722,113.775)
C6: (61.111,58.337,115.991)
C5: (61.341,56.957,116.117)
C4: (62.205,56.380,115.204)
P: (63.207,52.571,119.964)
C4': (64.134,52.365,116.189)
C2': (64.583,54.303,114.909)
C2: (62.548,58.297,114.189)
N1: (61.742,58.988,114.997)
N3: (62.847,57.005,114.204)
N6: (60.307,59.033,116.792)
N7: (60.860,56.007,117.008)
N9: (62.271,55.046,115.539)
O5': (63.144,52.681,118.376)
O3': (66.376,53.290,116.254)
OP2: (63.090,51.130,120.295)
C3': (64.992,53.619,116.206)
C1': (63.078,54.010,114.881)
C5': (63.851,51.748,117.537)
O4': (62.883,52.790,115.580)
C8: (61.436,54.894,116.622)
O2': (65.187,53.722,113.775)
C6: (61.111,58.337,115.991)
C5: (61.341,56.957,116.117)
C4: (62.205,56.380,115.204)
P: (63.207,52.571,119.964)
C4': (64.134,52.365,116.189)
C2': (64.583,54.303,114.909)
C2: (62.548,58.297,114.189)
N1: (61.742,58.988,114.997)
N3: (62.847,57.005,114.204)
N6: (60.307,59.033,116.792)
N7: (60.860,56.007,117.008)
N9: (62.271,55.046,115.539)
O5': (63.144,52.681,118.376)
O3': (66.376,53.290,116.254)
Image (generated by PyMOL):